RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 CDC42SE2Q9NRR3 84 aa13.44□□□□□ -0.26
CHTOP-204ENST00000368694 NHP2Q9NX24 153 aaKnown RBP13.44□□□□□ -0.26
CHTOP-204ENST00000368694 TAL2Q16559 108 aa13.43□□□□□ -0.26
CHTOP-204ENST00000368694 A0A0J9YXV3 536 aa13.43□□□□□ -0.26
CHTOP-204ENST00000368694 DNAH9Q9NYC9 4486 aa13.42□□□□□ -0.26
CHTOP-204ENST00000368694 IGLV4-60A0A075B6I1 120 aa13.41□□□□□ -0.26
CHTOP-204ENST00000368694 E9PLD3 99 aa13.41□□□□□ -0.26
CHTOP-204ENST00000368694 NHLRC4P0CG21 123 aaPredicted RBP13.41□□□□□ -0.26
CHTOP-204ENST00000368694 TMEM170BQ5T4T1 132 aa13.41□□□□□ -0.26
CHTOP-204ENST00000368694 LELP1Q5T871 98 aa13.41□□□□□ -0.26
CHTOP-204ENST00000368694 LYPD5Q6UWN5 251 aa13.4□□□□□ -0.26
CHTOP-204ENST00000368694 NFE4Q86UQ8 179 aa13.4□□□□□ -0.26
CHTOP-204ENST00000368694 IGLL5B9A064 214 aa13.4□□□□□ -0.27
CHTOP-204ENST00000368694 F8W1H4 67 aa13.4□□□□□ -0.27
CHTOP-204ENST00000368694 TRAV13-1A0A0B4J241 112 aa13.39□□□□□ -0.27
CHTOP-204ENST00000368694 UBE2D1P51668 147 aa13.39□□□□□ -0.27
CHTOP-204ENST00000368694 MEGF8Q7Z7M0 2845 aa13.38□□□□□ -0.27
CHTOP-204ENST00000368694 SCGB1A1P11684 91 aa13.38□□□□□ -0.27
CHTOP-204ENST00000368694 IGKV3OR2-268A0A0C4DH90 116 aa13.37□□□□□ -0.27
CHTOP-204ENST00000368694 A0A1B0GUV1 79 aa13.37□□□□□ -0.27
CHTOP-204ENST00000368694 J3QR89 54 aa13.37□□□□□ -0.27
CHTOP-204ENST00000368694 MAPKAPK5-AS1Q8N8E1 139 aa13.37□□□□□ -0.27
CHTOP-204ENST00000368694 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
CHTOP-204ENST00000368694 TINCRA0A1B0GVN0 87 aa13.36□□□□□ -0.27
CHTOP-204ENST00000368694 ZNF22P17026 224 aaPredicted RBP13.36□□□□□ -0.27
CHTOP-204ENST00000368694 HERVK_113P61574 105 aa13.36□□□□□ -0.27
CHTOP-204ENST00000368694 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
CHTOP-204ENST00000368694 TIRAPP58753 221 aa13.35□□□□□ -0.27
CHTOP-204ENST00000368694 C15orf53Q8NAA6 179 aa13.35□□□□□ -0.27
CHTOP-204ENST00000368694 HIST1H4GQ99525 98 aa13.35□□□□□ -0.27
CHTOP-204ENST00000368694 SIGMAR1Q99720 223 aa13.35□□□□□ -0.27
CHTOP-204ENST00000368694 Q8N3U1 123 aa13.34□□□□□ -0.27
CHTOP-204ENST00000368694 ESRGQ1W209 222 aa13.33□□□□□ -0.27
CHTOP-204ENST00000368694 WFDC2Q14508 124 aa13.33□□□□□ -0.28
CHTOP-204ENST00000368694 LINC00242Q5T6M2 205 aa13.33□□□□□ -0.28
CHTOP-204ENST00000368694 STAB2Q8WWQ8 2551 aa13.32□□□□□ -0.28
CHTOP-204ENST00000368694 ANGP03950 147 aaKnown RBP13.32□□□□□ -0.28
CHTOP-204ENST00000368694 HERVK_113P63121 156 aa13.32□□□□□ -0.28
CHTOP-204ENST00000368694 CLPSL2Q6UWE3 100 aa13.32□□□□□ -0.28
CHTOP-204ENST00000368694 PRKDCP78527 4128 aaKnown RBP13.32□□□□□ -0.28
CHTOP-204ENST00000368694 MYMXA0A1B0GTQ4 84 aa13.31□□□□□ -0.28
CHTOP-204ENST00000368694 A0A1B0GWB2 263 aa13.31□□□□□ -0.28
CHTOP-204ENST00000368694 TMEM223A0PJW6 202 aa13.31□□□□□ -0.28
CHTOP-204ENST00000368694 GAGE12HA6NDE8 117 aa13.31□□□□□ -0.28
CHTOP-204ENST00000368694 H3BMG7 143 aa13.31□□□□□ -0.28
CHTOP-204ENST00000368694 COX6A2Q02221 97 aa13.31□□□□□ -0.28
CHTOP-204ENST00000368694 IGHV3-64A0A075B6Q5 118 aa13.3□□□□□ -0.28
CHTOP-204ENST00000368694 CDKN2A-AS1Q9UH64 79 aa13.3□□□□□ -0.28
CHTOP-204ENST00000368694 FAM19A3Q7Z5A8 133 aa13.3□□□□□ -0.28
CHTOP-204ENST00000368694 WFDC10BQ8IUB3 73 aa13.3□□□□□ -0.28
CHTOP-204ENST00000368694 LINC00269Q8N2A0 174 aa13.3□□□□□ -0.28
CHTOP-204ENST00000368694 SVIPQ8NHG7 77 aa13.29□□□□□ -0.28
CHTOP-204ENST00000368694 LINC00959A0A1B0GUT2 108 aa13.28□□□□□ -0.28
CHTOP-204ENST00000368694 IGHV3-30P01768 117 aa13.28□□□□□ -0.28
CHTOP-204ENST00000368694 IGHV3-33P01772 117 aa13.28□□□□□ -0.28
CHTOP-204ENST00000368694 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
CHTOP-204ENST00000368694 IGHV3-30-5P0DP03 117 aa13.28□□□□□ -0.28
CHTOP-204ENST00000368694 IGLV5-45A0A087WSX0 123 aa13.27□□□□□ -0.28
CHTOP-204ENST00000368694 SPINK8P0C7L1 97 aa13.27□□□□□ -0.28
CHTOP-204ENST00000368694 ETDBQ3ZM63 59 aa13.27□□□□□ -0.28
CHTOP-204ENST00000368694 PRO0461Q9UI25 63 aa13.27□□□□□ -0.29
CHTOP-204ENST00000368694 TRAV8-3A0A0A6YYJ7 113 aa13.26□□□□□ -0.29
CHTOP-204ENST00000368694 REG3AQ06141 175 aa13.26□□□□□ -0.29
CHTOP-204ENST00000368694 SS18Q15532 418 aa13.26□□□□□ -0.29
CHTOP-204ENST00000368694 KLK12Q9UKR0 248 aa13.25□□□□□ -0.29
CHTOP-204ENST00000368694 J3QQQ9 107 aa13.24□□□□□ -0.29
CHTOP-204ENST00000368694 LEPROTO15243 131 aa13.24□□□□□ -0.29
CHTOP-204ENST00000368694 LGALS3P17931 250 aaKnown RBP13.24□□□□□ -0.29
CHTOP-204ENST00000368694 TSPEAR-AS2P59090 65 aa13.24□□□□□ -0.29
CHTOP-204ENST00000368694 TMEM238LA0A1B0GVL6 79 aa13.24□□□□□ -0.29
CHTOP-204ENST00000368694 A6NJY4 79 aa13.24□□□□□ -0.29
CHTOP-204ENST00000368694 CCL18P55774 89 aa13.24□□□□□ -0.29
CHTOP-204ENST00000368694 IGHV1-58A0A0C4DH39 117 aa13.23□□□□□ -0.29
CHTOP-204ENST00000368694 ZNF815PA8K554 130 aa13.23□□□□□ -0.29
CHTOP-204ENST00000368694 XCL1P47992 114 aa13.23□□□□□ -0.29
CHTOP-204ENST00000368694 PLEKHB2Q96CS7 222 aa13.22□□□□□ -0.29
CHTOP-204ENST00000368694 IGLV10-54A0A075B6I4 117 aa13.22□□□□□ -0.29
CHTOP-204ENST00000368694 A0A1B0GV72 72 aa13.22□□□□□ -0.29
CHTOP-204ENST00000368694 LINC00588Q9Y4M8 146 aa13.22□□□□□ -0.29
CHTOP-204ENST00000368694 MTURNQ8N3F0 131 aa13.21□□□□□ -0.29
CHTOP-204ENST00000368694 PGPEP1Q9NXJ5 209 aa13.21□□□□□ -0.29
CHTOP-204ENST00000368694 CRPP02741 224 aa13.2□□□□□ -0.3
CHTOP-204ENST00000368694 IGHV3OR16-9A0A0B4J2B5 98 aa13.2□□□□□ -0.3
CHTOP-204ENST00000368694 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
CHTOP-204ENST00000368694 APOMO95445 188 aa13.2□□□□□ -0.3
CHTOP-204ENST00000368694 NUPR2A6NF83 97 aa13.19□□□□□ -0.3
CHTOP-204ENST00000368694 PRR34Q9NV39 138 aa13.19□□□□□ -0.3
CHTOP-204ENST00000368694 LINC01556Q5JQF7 62 aa13.19□□□□□ -0.3
CHTOP-204ENST00000368694 SCGB1D4Q6XE38 83 aa13.19□□□□□ -0.3
CHTOP-204ENST00000368694 C5orf38Q86SI9 138 aa13.19□□□□□ -0.3
CHTOP-204ENST00000368694 CHCHD10Q8WYQ3 142 aaPredicted RBP13.19□□□□□ -0.3
CHTOP-204ENST00000368694 UBE2WQ96B02 151 aa13.19□□□□□ -0.3
CHTOP-204ENST00000368694 ENHOQ6UWT2 76 aa13.17□□□□□ -0.3
CHTOP-204ENST00000368694 KLK5Q9Y337 293 aaPredicted RBP13.17□□□□□ -0.3
CHTOP-204ENST00000368694 A0A087WZ39 114 aa13.16□□□□□ -0.3
CHTOP-204ENST00000368694 IGLV5-39A0A0G2JS06 123 aa13.16□□□□□ -0.3
CHTOP-204ENST00000368694 FOXI1Q12951 378 aa13.16□□□□□ -0.3
CHTOP-204ENST00000368694 SRSF9Q13242 221 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■□□□□ 8.6
CHTOP-204ENST00000368694 LYRM7Q5U5X0 104 aa13.16□□□□□ -0.3
CHTOP-204ENST00000368694 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms