RNA–Protein interactions for RNA: ENST00000368390.7

MUC1-206, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-206ENST00000368390 HIST1H4GQ99525 98 aa5.54□□□□□ -1.52
MUC1-206ENST00000368390 GEMIN7Q9H840 131 aaKnown RBP5.54□□□□□ -1.52
MUC1-206ENST00000368390 TEX48A0A1B0GUV7 120 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 PAX4O43316 350 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 SPART-AS1P0CW21 52 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 HERVK_113P63121 156 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 GAGE6Q13070 117 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 LINC00242Q5T6M2 205 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 AMMECR1LQ6DCA0 310 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 SCGB1D4Q6XE38 83 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 LINC00469Q8N7U9 141 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 MRAPQ8TCY5 172 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 VSIG2Q96IQ7 327 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 SPANXB1Q9NS25 103 aaPredicted RBP5.53□□□□□ -1.52
MUC1-206ENST00000368390 CELA1Q9UNI1 258 aa5.53□□□□□ -1.52
MUC1-206ENST00000368390 C9orf118A6NHY6 69 aa5.52□□□□□ -1.53
MUC1-206ENST00000368390 K7EP13 123 aa5.52□□□□□ -1.53
MUC1-206ENST00000368390 ATP5G1P05496 136 aa5.52□□□□□ -1.53
MUC1-206ENST00000368390 SMIM13P0DJ93 91 aa5.52□□□□□ -1.53
MUC1-206ENST00000368390 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
MUC1-206ENST00000368390 COX6A2Q02221 97 aa5.52□□□□□ -1.53
MUC1-206ENST00000368390 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
MUC1-206ENST00000368390 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 TRAV26-1A0A087WT03 109 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 TRAV8-3A0A0A6YYJ7 113 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 TRAV13-1A0A0B4J241 112 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 IGLV5-39A0A0G2JS06 123 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 A0A1B0GWB2 263 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 SPINK8P0C7L1 97 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 CHCHD5Q9BSY4 110 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 CDKN2A-AS1Q9UH64 79 aa5.51□□□□□ -1.53
MUC1-206ENST00000368390 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.51□□□□□ -1.53
MUC1-206ENST00000368390 IGLV4-60A0A075B6I1 120 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 F5H768 121 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 G3V4G9 280 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 IGHV3-30P01768 117 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 IGHV3-30-5P0DP03 117 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 SRSF9Q13242 221 aaKnown RBP eCLIP5.5□□□□□ -1.53
MUC1-206ENST00000368390 VAMP3Q15836 100 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 C12orf74Q32Q52 190 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 ZFAND6Q6FIF0 208 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 C10orf126Q8N4M7 172 aa5.5□□□□□ -1.53
MUC1-206ENST00000368390 NHP2Q9NX24 153 aaKnown RBP5.5□□□□□ -1.53
MUC1-206ENST00000368390 SMIM1B2RUZ4 78 aa5.49□□□□□ -1.53
MUC1-206ENST00000368390 K7ERJ3 54 aa5.49□□□□□ -1.53
MUC1-206ENST00000368390 NDUFA1O15239 70 aa5.49□□□□□ -1.53
MUC1-206ENST00000368390 UBE2V1Q13404 147 aa5.49□□□□□ -1.53
MUC1-206ENST00000368390 SH2D6Q7Z4S9 175 aa5.49□□□□□ -1.53
MUC1-206ENST00000368390 C11orf68Q9H3H3 251 aaKnown RBP5.49□□□□□ -1.53
MUC1-206ENST00000368390 RETNQ9HD89 108 aa5.49□□□□□ -1.53
MUC1-206ENST00000368390 NDUFA12Q9UI09 145 aa5.49□□□□□ -1.53
MUC1-206ENST00000368390 STAB2Q8WWQ8 2551 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 TMEM238C9JI98 176 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 H3BUT2 72 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 TIMM17BO60830 172 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 RBX1P62877 108 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 MRPL23Q16540 153 aaKnown RBP5.48□□□□□ -1.53
MUC1-206ENST00000368390 RAB37Q96AX2 223 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 LITAFQ99732 161 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
MUC1-206ENST00000368390 A0A096LPF7 62 aa5.47□□□□□ -1.53
MUC1-206ENST00000368390 A0A1W2PPM0 123 aa5.47□□□□□ -1.53
MUC1-206ENST00000368390 IGLL5B9A064 214 aa5.47□□□□□ -1.53
MUC1-206ENST00000368390 CCL25O15444 150 aa5.47□□□□□ -1.53
MUC1-206ENST00000368390 SPANXDQ9BXN6 97 aa5.47□□□□□ -1.53
MUC1-206ENST00000368390 SPANXCQ9NY87 97 aa5.47□□□□□ -1.53
MUC1-206ENST00000368390 ICOSQ9Y6W8 199 aa5.47□□□□□ -1.53
MUC1-206ENST00000368390 HUWE1Q7Z6Z7 4374 aaKnown RBP5.46□□□□□ -1.54
MUC1-206ENST00000368390 LINC00959A0A1B0GUT2 108 aa5.46□□□□□ -1.54
MUC1-206ENST00000368390 TMEM262E9PQX1 116 aa5.46□□□□□ -1.54
MUC1-206ENST00000368390 H3BNG1 76 aa5.46□□□□□ -1.54
MUC1-206ENST00000368390 HTN3P15516 51 aa5.46□□□□□ -1.54
MUC1-206ENST00000368390 NAA38Q9BRA0 125 aaKnown RBP5.46□□□□□ -1.54
MUC1-206ENST00000368390 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 K7EP34 96 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 FABP2P12104 132 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 RPL24P83731 157 aaKnown RBP5.45□□□□□ -1.54
MUC1-206ENST00000368390 ADAMTSL4-AS1Q5T5F5 129 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 KPRPQ5T749 579 aaPredicted RBP5.45□□□□□ -1.54
MUC1-206ENST00000368390 LELP1Q5T871 98 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 GTF2H5Q6ZYL4 71 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 MUSTN1Q8IVN3 82 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
MUC1-206ENST00000368390 ZNF625Q96I27 306 aaPredicted RBP5.45□□□□□ -1.54
MUC1-206ENST00000368390 A0A087WZ39 114 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 IGKV3OR2-268A0A0C4DH90 116 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 GAGE10A6NGK3 116 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 CFC1P0CG37 223 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 HERV-K104P63124 156 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 SS18Q15532 418 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 MIAQ16674 131 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 LYSTQ99698 3801 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 Q9H8V8 135 aa5.44□□□□□ -1.54
MUC1-206ENST00000368390 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
MUC1-206ENST00000368390 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms