RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 WFDC10AQ9H1F0 79 aa6.47□□□□□ -1.37
SYNE1-206ENST00000367253 FASNP49327 2511 aaKnown RBP6.47□□□□□ -1.37
SYNE1-206ENST00000367253 FAM30AQ9NZY2 134 aa6.47□□□□□ -1.37
SYNE1-206ENST00000367253 C16orf95Q9H693 158 aa6.47□□□□□ -1.37
SYNE1-206ENST00000367253 PROK2Q9HC23 129 aa6.47□□□□□ -1.37
SYNE1-206ENST00000367253 HCG22E2RYF7 251 aa6.46□□□□□ -1.37
SYNE1-206ENST00000367253 SMR3AQ99954 134 aa6.46□□□□□ -1.37
SYNE1-206ENST00000367253 PHF3Q92576 2039 aaKnown RBP6.46□□□□□ -1.37
SYNE1-206ENST00000367253 PRYO14603 147 aa6.46□□□□□ -1.37
SYNE1-206ENST00000367253 IGKV1-17P01599 117 aa6.46□□□□□ -1.37
SYNE1-206ENST00000367253 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.37
SYNE1-206ENST00000367253 ATG2AQ2TAZ0 1938 aa6.46□□□□□ -1.38
SYNE1-206ENST00000367253 LRP4O75096 1905 aa6.46□□□□□ -1.38
SYNE1-206ENST00000367253 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.38
SYNE1-206ENST00000367253 C1orf158Q8N1D5 194 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 Q8N9L7 120 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 BRI3O95415 125 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 MED14OSP0DP75 135 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 LIMD2Q9BT23 127 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 COL4A2P08572 1712 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 CCKP06307 115 aa6.45□□□□□ -1.38
SYNE1-206ENST00000367253 WDR87Q6ZQQ6 2873 aa6.44□□□□□ -1.38
SYNE1-206ENST00000367253 CEMP1Q6PRD7 247 aaPredicted RBP6.44□□□□□ -1.38
SYNE1-206ENST00000367253 TLN1Q9Y490 2541 aaKnown RBP6.44□□□□□ -1.38
SYNE1-206ENST00000367253 FAM19A4Q96LR4 140 aa6.44□□□□□ -1.38
SYNE1-206ENST00000367253 H7C423 109 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 Q6JHZ5 121 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 Q6ZVQ6 151 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 IGF2RP11717 2491 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 TRBV7-7A0A0K0K1E9 115 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 LELP1Q5T871 98 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 MUC4Q99102 2169 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
SYNE1-206ENST00000367253 A0A1W2PNU3 283 aaPredicted RBP6.42□□□□□ -1.38
SYNE1-206ENST00000367253 CHD7Q9P2D1 2997 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 IGLV11-55A0A075B6I3 123 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 IGKV1D-37A0A075B6S9 117 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 PCNTO95613 3336 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 IGLV4-69A0A075B6H9 119 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 C15orf65H3BRN8 121 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 C20orf203Q8NBC4 194 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 ODF3Q96PU9 254 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 ABCA12Q86UK0 2595 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 CEP295Q9C0D2 2601 aa6.42□□□□□ -1.38
SYNE1-206ENST00000367253 A0A0J9YX75 114 aa6.41□□□□□ -1.38
SYNE1-206ENST00000367253 ZNF524Q96C55 264 aa6.41□□□□□ -1.38
SYNE1-206ENST00000367253 C19orf71A6NCJ1 209 aa6.41□□□□□ -1.38
SYNE1-206ENST00000367253 C2orf91Q6ZV80 131 aa6.41□□□□□ -1.38
SYNE1-206ENST00000367253 WFDC10BQ8IUB3 73 aa6.41□□□□□ -1.38
SYNE1-206ENST00000367253 Q8N7P7 452 aa6.41□□□□□ -1.38
SYNE1-206ENST00000367253 PRRC2AP48634 2157 aaKnown RBP6.41□□□□□ -1.38
SYNE1-206ENST00000367253 YLPM1P49750 1951 aaKnown RBP6.41□□□□□ -1.38
SYNE1-206ENST00000367253 CHD9Q3L8U1 2897 aa6.4□□□□□ -1.38
SYNE1-206ENST00000367253 C6orf223Q8N319 242 aa6.4□□□□□ -1.38
SYNE1-206ENST00000367253 ZNF702PQ9H963 129 aa6.4□□□□□ -1.39
SYNE1-206ENST00000367253 LY6LH3BQJ8 138 aa6.4□□□□□ -1.39
SYNE1-206ENST00000367253 IGLV2-8P01709 118 aa6.4□□□□□ -1.39
SYNE1-206ENST00000367253 SPTBN4Q9H254 2564 aa6.39□□□□□ -1.39
SYNE1-206ENST00000367253 C11orf71Q6IPW1 123 aa6.38□□□□□ -1.39
SYNE1-206ENST00000367253 TRBV6-4A0A1B0GX49 114 aa6.38□□□□□ -1.39
SYNE1-206ENST00000367253 NCOA6Q14686 2063 aaPredicted RBP6.38□□□□□ -1.39
SYNE1-206ENST00000367253 KRTAP10-9P60411 292 aa6.38□□□□□ -1.39
SYNE1-206ENST00000367253 EML6Q6ZMW3 1958 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 TRBV6-1A0A0K0K1D8 114 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 PATE2Q6UY27 113 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 TRBV10-3A0A0K0K1G6 114 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 IGLV1-47P01700 117 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 FAM167A-AS1Q96KT0 104 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 SLPIP03973 132 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 COL5A1P20908 1838 aaPredicted RBP6.37□□□□□ -1.39
SYNE1-206ENST00000367253 EML5Q05BV3 1969 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 A0A096LNI7 61 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 TRANK1O15050 2925 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 P0C879 139 aa6.37□□□□□ -1.39
SYNE1-206ENST00000367253 A0A1B0GXF2 115 aa6.36□□□□□ -1.39
SYNE1-206ENST00000367253 CHCHD10Q8WYQ3 142 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-206ENST00000367253 SPINK6Q6UWN8 80 aa6.36□□□□□ -1.39
SYNE1-206ENST00000367253 DCANP1Q8TF63 244 aa6.36□□□□□ -1.39
SYNE1-206ENST00000367253 BBC3Q96PG8 261 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-206ENST00000367253 ANKRD11Q6UB99 2663 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-206ENST00000367253 ZNF295-AS1Q8N0V1 137 aa6.36□□□□□ -1.39
SYNE1-206ENST00000367253 MRGPRG-AS1Q2M3A8 158 aa6.36□□□□□ -1.39
SYNE1-206ENST00000367253 LINC00308Q8TCZ7 52 aa6.36□□□□□ -1.39
SYNE1-206ENST00000367253 K7EQG2 157 aa6.35□□□□□ -1.39
SYNE1-206ENST00000367253 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
SYNE1-206ENST00000367253 KRTAP24-1Q3LI83 254 aa6.35□□□□□ -1.39
SYNE1-206ENST00000367253 RANBP2P49792 3224 aaKnown RBP6.35□□□□□ -1.39
SYNE1-206ENST00000367253 WFDC13Q8IUB5 93 aa6.35□□□□□ -1.39
SYNE1-206ENST00000367253 A8MUN3 132 aa6.35□□□□□ -1.39
SYNE1-206ENST00000367253 E7EUB6 86 aa6.35□□□□□ -1.39
SYNE1-206ENST00000367253 I3L2K1 104 aa6.35□□□□□ -1.39
SYNE1-206ENST00000367253 hDV103S1A0JD37 113 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 LST1O00453 97 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 LINC00208Q96KT6 92 aa6.34□□□□□ -1.39
SYNE1-206ENST00000367253 K7EIM0 57 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms