RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NCR3O14931 201 aa8.64□□□□□ -1.03
CDC42BPA-202ENST00000366764 CFAP46Q8IYW2 2715 aa8.64□□□□□ -1.03
CDC42BPA-202ENST00000366764 MAST4O15021 2626 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 UBE2BP63146 152 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 CHD7Q9P2D1 2997 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 FAM236DA0A1B0GTK5 79 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 FAM236CP0DP71 79 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 Q8IZM0 81 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 TRAV23DV6A0A075B6W5 121 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 CCL18P55774 89 aa8.63□□□□□ -1.03
CDC42BPA-202ENST00000366764 MRAPQ8TCY5 172 aa8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 ZNF702PQ9H963 129 aa8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 USP17L23D6RBM5 183 aa8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 BEAN1Q3B7T3 259 aa8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 BPY2O14599 106 aa8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 NDUFB1O75438 58 aa8.62□□□□□ -1.03
CDC42BPA-202ENST00000366764 ITPR3Q14573 2671 aa8.61□□□□□ -1.03
CDC42BPA-202ENST00000366764 C5orf47Q569G3 176 aa8.61□□□□□ -1.03
CDC42BPA-202ENST00000366764 LINC00242Q5T6M2 205 aa8.61□□□□□ -1.03
CDC42BPA-202ENST00000366764 MIFP14174 115 aa8.61□□□□□ -1.03
CDC42BPA-202ENST00000366764 POM121L12Q8N7R1 296 aa8.61□□□□□ -1.03
CDC42BPA-202ENST00000366764 DEFB121Q5J5C9 76 aa8.6□□□□□ -1.03
CDC42BPA-202ENST00000366764 TSPEAR-AS2P59090 65 aa8.6□□□□□ -1.03
CDC42BPA-202ENST00000366764 C19orf84I3L1E1 186 aa8.6□□□□□ -1.03
CDC42BPA-202ENST00000366764 DEFB105AQ8NG35 78 aa8.59□□□□□ -1.03
CDC42BPA-202ENST00000366764 A0A087WZ39 114 aa8.59□□□□□ -1.03
CDC42BPA-202ENST00000366764 NRGNQ92686 78 aa8.59□□□□□ -1.03
CDC42BPA-202ENST00000366764 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
CDC42BPA-202ENST00000366764 C20orf197Q8N268 126 aa8.59□□□□□ -1.03
CDC42BPA-202ENST00000366764 CCDC179H3BU77 68 aa8.59□□□□□ -1.04
CDC42BPA-202ENST00000366764 CHD9Q3L8U1 2897 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 LINC00526Q96FQ7 95 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 PROK1P58294 105 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 Q6ZSV7 163 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 SMIM11BQ8TCY0 68 aa8.58□□□□□ -1.04
CDC42BPA-202ENST00000366764 KIR2DL5BQ8NHK3 375 aa8.57□□□□□ -1.04
CDC42BPA-202ENST00000366764 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
CDC42BPA-202ENST00000366764 KIF25-AS1Q9Y6Z4 181 aa8.57□□□□□ -1.04
CDC42BPA-202ENST00000366764 KLK9Q2XQG4 91 aa8.56□□□□□ -1.04
CDC42BPA-202ENST00000366764 C6orf99Q4VX62 202 aa8.56□□□□□ -1.04
CDC42BPA-202ENST00000366764 TRBV7-7A0A0K0K1E9 115 aa8.56□□□□□ -1.04
CDC42BPA-202ENST00000366764 LINC01561Q8N1V8 128 aa8.56□□□□□ -1.04
CDC42BPA-202ENST00000366764 HELZ2Q9BYK8 2649 aaKnown RBP8.56□□□□□ -1.04
CDC42BPA-202ENST00000366764 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-202ENST00000366764 MGAM2Q2M2H8 2515 aa8.56□□□□□ -1.04
CDC42BPA-202ENST00000366764 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
CDC42BPA-202ENST00000366764 A8MZ25 164 aa8.55□□□□□ -1.04
CDC42BPA-202ENST00000366764 CDIP1Q9H305 208 aa8.55□□□□□ -1.04
CDC42BPA-202ENST00000366764 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
CDC42BPA-202ENST00000366764 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
CDC42BPA-202ENST00000366764 CCKP06307 115 aa8.54□□□□□ -1.04
CDC42BPA-202ENST00000366764 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
CDC42BPA-202ENST00000366764 LELP1Q5T871 98 aa8.54□□□□□ -1.04
CDC42BPA-202ENST00000366764 PRO0461Q9UI25 63 aa8.54□□□□□ -1.04
CDC42BPA-202ENST00000366764 C10orf99Q6UWK7 81 aa8.54□□□□□ -1.04
CDC42BPA-202ENST00000366764 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
CDC42BPA-202ENST00000366764 IGLV5-39A0A0G2JS06 123 aa8.53□□□□□ -1.04
CDC42BPA-202ENST00000366764 GCN1Q92616 2671 aaKnown RBP8.53□□□□□ -1.04
CDC42BPA-202ENST00000366764 A0A1B0GUV1 79 aa8.53□□□□□ -1.04
CDC42BPA-202ENST00000366764 CHD6Q8TD26 2715 aa8.52□□□□□ -1.05
CDC42BPA-202ENST00000366764 M0R378 163 aa8.52□□□□□ -1.05
CDC42BPA-202ENST00000366764 A0A0C4DFX4 3053 aa8.52□□□□□ -1.05
CDC42BPA-202ENST00000366764 HECTD1Q9ULT8 2610 aa8.52□□□□□ -1.05
CDC42BPA-202ENST00000366764 WFDC9Q8NEX5 89 aa8.52□□□□□ -1.05
CDC42BPA-202ENST00000366764 V9GYY9 64 aa8.51□□□□□ -1.05
CDC42BPA-202ENST00000366764 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
CDC42BPA-202ENST00000366764 SLPIP03973 132 aa8.51□□□□□ -1.05
CDC42BPA-202ENST00000366764 ODF3L2Q3SX64 289 aa8.51□□□□□ -1.05
CDC42BPA-202ENST00000366764 Q8N814 137 aa8.51□□□□□ -1.05
CDC42BPA-202ENST00000366764 IGHV4-28A0A0C4DH34 117 aa8.51□□□□□ -1.05
CDC42BPA-202ENST00000366764 IGLV5-45A0A087WSX0 123 aa8.5□□□□□ -1.05
CDC42BPA-202ENST00000366764 ZNF73O43830 326 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPA-202ENST00000366764 Q6ZQY7 126 aa8.5□□□□□ -1.05
CDC42BPA-202ENST00000366764 NTM-AS1Q6ZSK4 140 aa8.5□□□□□ -1.05
CDC42BPA-202ENST00000366764 ESM1Q9NQ30 184 aa8.5□□□□□ -1.05
CDC42BPA-202ENST00000366764 SBSPONQ8IVN8 264 aa8.49□□□□□ -1.05
CDC42BPA-202ENST00000366764 F8WDY8 70 aa8.49□□□□□ -1.05
CDC42BPA-202ENST00000366764 C5orf42Q9H799 3197 aa8.49□□□□□ -1.05
CDC42BPA-202ENST00000366764 LINC00315P59091 139 aa8.49□□□□□ -1.05
CDC42BPA-202ENST00000366764 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-202ENST00000366764 CDSNQ15517 529 aa8.49□□□□□ -1.05
CDC42BPA-202ENST00000366764 DEFB4AO15263 64 aa8.49□□□□□ -1.05
CDC42BPA-202ENST00000366764 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
CDC42BPA-202ENST00000366764 UBE2AP49459 152 aa8.47□□□□□ -1.05
CDC42BPA-202ENST00000366764 PPDPFQ9H3Y8 114 aa8.47□□□□□ -1.05
CDC42BPA-202ENST00000366764 C11orf45Q8TAV5 145 aa8.47□□□□□ -1.05
CDC42BPA-202ENST00000366764 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
CDC42BPA-202ENST00000366764 HILS1P60008 231 aa8.46□□□□□ -1.05
CDC42BPA-202ENST00000366764 SERP1Q9Y6X1 66 aa8.46□□□□□ -1.05
CDC42BPA-202ENST00000366764 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.05
CDC42BPA-202ENST00000366764 LINC01006Q8NI28 216 aa8.46□□□□□ -1.05
CDC42BPA-202ENST00000366764 NDUFS5O43920 106 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms