RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PLGLB1Q02325 96 aa-1.46□□□□□ -2.64
RNU4-28P-201ENST00000364739 HEPN1Q6WQI6 88 aa-1.46□□□□□ -2.64
RNU4-28P-201ENST00000364739 IFI27L1Q96BM0 104 aa-1.46□□□□□ -2.64
RNU4-28P-201ENST00000364739 USMG5Q96IX5 58 aa-1.46□□□□□ -2.64
RNU4-28P-201ENST00000364739 CDC42SE2Q9NRR3 84 aa-1.46□□□□□ -2.64
RNU4-28P-201ENST00000364739 PARP14Q460N5 1801 aa-1.46□□□□□ -2.64
RNU4-28P-201ENST00000364739 UTRNP46939 3433 aa-1.46□□□□□ -2.64
RNU4-28P-201ENST00000364739 E7EQ34 232 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 LYNX1G3V0Z9 82 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 K7EP13 123 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 SPART-AS1P0CW21 52 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 SLC25A6P12236 298 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 G0S2P27469 103 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 HSD17B12Q53GQ0 312 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 WFDC13Q8IUB5 93 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 FAM223AQ8IWN6 122 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 LEAP2Q969E1 77 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 SLC35B3Q9H1N7 401 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 PRO3102Q9H379 93 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 SCN3BQ9NY72 215 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 TAS2R8Q9NYW2 309 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 UBE2D4Q9Y2X8 147 aa-1.47□□□□□ -2.64
RNU4-28P-201ENST00000364739 MYOM3Q5VTT5 1437 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 GRIN2AQ12879 1464 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 F8VRH5 84 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 G3V318 75 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 M0QZ58 72 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 PFDN1O60925 122 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 CDKN2A-AS1Q9UH64 79 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 SCP2D1Q9UJQ7 156 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 CCDC171Q6TFL3 1326 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 KIAA0556O60303 1618 aa-1.48□□□□□ -2.65
RNU4-28P-201ENST00000364739 NRXN2Q9P2S2 1712 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 GOLGA3Q08378 1498 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 PXDNQ92626 1479 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 PSME4Q14997 1843 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 HMGXB3Q12766 1538 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 UBE2L5PA0A1B0GUS4 154 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 HIST1H1BP16401 226 aaKnown RBP-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 SLC48A1Q6P1K1 146 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 C20orf197Q8N268 126 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 TTC9CQ8N5M4 171 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 Q8N8P6 123 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 NPVFQ9HCQ7 196 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 MED23Q9ULK4 1368 aa-1.49□□□□□ -2.65
RNU4-28P-201ENST00000364739 TULP4Q9NRJ4 1543 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 TRBV20-1A0A075B6N2 111 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 HLA-DRB4P13762 266 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 OR8B8Q15620 311 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 Q6ZUT4 128 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 DEFB106AQ8N104 65 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 COX7B2Q8TF08 81 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 CCDC115Q96NT0 180 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 SMPXQ9UHP9 88 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 HLA-DRB4X5D2U9 266 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 PATJQ8NI35 1801 aa-1.5□□□□□ -2.65
RNU4-28P-201ENST00000364739 PIK3C2BO00750 1634 aa-1.51□□□□□ -2.65
RNU4-28P-201ENST00000364739 IGLV5-48A0A075B6I7 105 aa-1.51□□□□□ -2.65
RNU4-28P-201ENST00000364739 PSPHP78330 225 aa-1.51□□□□□ -2.65
RNU4-28P-201ENST00000364739 SSBP1Q04837 148 aaKnown RBP-1.51□□□□□ -2.65
RNU4-28P-201ENST00000364739 HIGD1BQ9P298 99 aa-1.51□□□□□ -2.65
RNU4-28P-201ENST00000364739 KDM3BQ7LBC6 1761 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 WNK3Q9BYP7 1800 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 XIRP2A4UGR9 3374 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 TRAV1-2A0A0B4J238 106 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 H0YJX3 145 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 J3KT08 172 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 CCL22O00626 93 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 PCBD2Q9H0N5 130 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 NDUFA12Q9UI09 145 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 V9GYV3 84 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 ROCK1Q13464 1354 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 POLA1P09884 1462 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 ATP7BP35670 1465 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 DNMBPQ6XZF7 1577 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 SETBP1Q9Y6X0 1596 aa-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 GOLGB1Q14789 3259 aaKnown RBP-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 POLR1AO95602 1720 aaPredicted RBP-1.52□□□□□ -2.65
RNU4-28P-201ENST00000364739 TRAV12-3A0A0B4J271 114 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 TRBV7-4A0A0J9YYF1 115 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 I3L3M4 83 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 ARHGEF10O15013 1369 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 DEGS1O15121 323 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 ARPC5O15511 151 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 MGPP08493 103 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 SCGB1A1P11684 91 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 PIPP12273 146 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 BTG2P78543 158 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 CDC26Q8NHZ8 85 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 DYNLRB2Q8TF09 96 aa-1.53□□□□□ -2.65
RNU4-28P-201ENST00000364739 PBRM1Q86U86 1689 aa-1.54□□□□□ -2.66
RNU4-28P-201ENST00000364739 CCDC141Q6ZP82 1450 aa-1.54□□□□□ -2.66
RNU4-28P-201ENST00000364739 HCG22E2RYF7 251 aa-1.54□□□□□ -2.66
RNU4-28P-201ENST00000364739 ATPIF1Q9UII2 106 aa-1.54□□□□□ -2.66
RNU4-28P-201ENST00000364739 ZNF831Q5JPB2 1677 aa-1.55□□□□□ -2.66
RNU4-28P-201ENST00000364739 ARAP1Q96P48 1450 aa-1.55□□□□□ -2.66
RNU4-28P-201ENST00000364739 EEA1Q15075 1411 aa-1.55□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms