RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 C16orf74Q96GX8 76 aa10.15□□□□□ -0.78
COL6A1-201ENST00000361866 TRAV23DV6A0A075B6W5 121 aa10.15□□□□□ -0.79
COL6A1-201ENST00000361866 ZNF843Q8N446 348 aa10.15□□□□□ -0.79
COL6A1-201ENST00000361866 WFDC10AQ9H1F0 79 aa10.15□□□□□ -0.79
COL6A1-201ENST00000361866 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
COL6A1-201ENST00000361866 C3orf22Q8N5N4 141 aa10.14□□□□□ -0.79
COL6A1-201ENST00000361866 DMXL2Q8TDJ6 3036 aa10.13□□□□□ -0.79
COL6A1-201ENST00000361866 TACC2O95359 2948 aa10.13□□□□□ -0.79
COL6A1-201ENST00000361866 TMEM89A2RUT3 159 aa10.13□□□□□ -0.79
COL6A1-201ENST00000361866 TIRAPP58753 221 aa10.13□□□□□ -0.79
COL6A1-201ENST00000361866 Q9UF83 564 aa10.13□□□□□ -0.79
COL6A1-201ENST00000361866 LINC00315P59091 139 aa10.13□□□□□ -0.79
COL6A1-201ENST00000361866 Q6ZSN1 163 aa10.13□□□□□ -0.79
COL6A1-201ENST00000361866 COX6A2Q02221 97 aa10.12□□□□□ -0.79
COL6A1-201ENST00000361866 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
COL6A1-201ENST00000361866 LINC01546A6NGU7 62 aa10.12□□□□□ -0.79
COL6A1-201ENST00000361866 PKIGQ9Y2B9 76 aa10.11□□□□□ -0.79
COL6A1-201ENST00000361866 C4orf3Q8WVX3 66 aa10.11□□□□□ -0.79
COL6A1-201ENST00000361866 FAM110AQ9BQ89 295 aa10.11□□□□□ -0.79
COL6A1-201ENST00000361866 WDFY3Q8IZQ1 3526 aa10.1□□□□□ -0.79
COL6A1-201ENST00000361866 DEFB105AQ8NG35 78 aa10.1□□□□□ -0.79
COL6A1-201ENST00000361866 ZNF292O60281 2723 aa10.1□□□□□ -0.79
COL6A1-201ENST00000361866 F8P00451 2351 aa10.09□□□□□ -0.79
COL6A1-201ENST00000361866 LOC400499M0QZD8 3231 aa10.09□□□□□ -0.79
COL6A1-201ENST00000361866 DEFB135Q30KP9 77 aa10.09□□□□□ -0.79
COL6A1-201ENST00000361866 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
COL6A1-201ENST00000361866 AKAP13Q12802 2813 aa10.09□□□□□ -0.79
COL6A1-201ENST00000361866 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
COL6A1-201ENST00000361866 Q6YL49 198 aa10.08□□□□□ -0.8
COL6A1-201ENST00000361866 C20orf197Q8N268 126 aa10.08□□□□□ -0.8
COL6A1-201ENST00000361866 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
COL6A1-201ENST00000361866 LINC00269Q8N2A0 174 aa10.08□□□□□ -0.8
COL6A1-201ENST00000361866 KLK12Q9UKR0 248 aa10.08□□□□□ -0.8
COL6A1-201ENST00000361866 ZNF702PQ9H963 129 aa10.07□□□□□ -0.8
COL6A1-201ENST00000361866 RPL18AQ02543 176 aaKnown RBP10.07□□□□□ -0.8
COL6A1-201ENST00000361866 SMIM11BQ8TCY0 68 aa10.07□□□□□ -0.8
COL6A1-201ENST00000361866 AMELXQ99217 191 aa10.07□□□□□ -0.8
COL6A1-201ENST00000361866 BRK1Q8WUW1 75 aa10.07□□□□□ -0.8
COL6A1-201ENST00000361866 LOC107984640A0A0U1RRK4 108 aa10.06□□□□□ -0.8
COL6A1-201ENST00000361866 TIMM17BO60830 172 aa10.06□□□□□ -0.8
COL6A1-201ENST00000361866 KLK5Q9Y337 293 aaPredicted RBP10.06□□□□□ -0.8
COL6A1-201ENST00000361866 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
COL6A1-201ENST00000361866 IGHV4-28A0A0C4DH34 117 aa10.06□□□□□ -0.8
COL6A1-201ENST00000361866 JMJD7-PLA2G4BH0Y9G9 81 aa10.06□□□□□ -0.8
COL6A1-201ENST00000361866 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
COL6A1-201ENST00000361866 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
COL6A1-201ENST00000361866 A0A087WVE0 104 aa10.05□□□□□ -0.8
COL6A1-201ENST00000361866 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
COL6A1-201ENST00000361866 WFDC9Q8NEX5 89 aa10.05□□□□□ -0.8
COL6A1-201ENST00000361866 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
COL6A1-201ENST00000361866 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
COL6A1-201ENST00000361866 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 ENHOQ6UWT2 76 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 DNAJC9-AS1A6NH13 148 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 IGHV4-31P0DP07 118 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 HRCT1Q6UXD1 115 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 CCL18P55774 89 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 SCXQ7RTU7 201 aa10.04□□□□□ -0.8
COL6A1-201ENST00000361866 TMEM258P61165 79 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 DEFB121Q5J5C9 76 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 TMEM256-PLSCR3K7ERE1 68 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 ODF3L2Q3SX64 289 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 FHL3Q13643 280 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 Q6Q795 121 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 XAGE1AQ9HD64 81 aa10.03□□□□□ -0.8
COL6A1-201ENST00000361866 COL27A1Q8IZC6 1860 aaPredicted RBP10.02□□□□□ -0.81
COL6A1-201ENST00000361866 IBA57-AS1B1ANH7 110 aa10.02□□□□□ -0.81
COL6A1-201ENST00000361866 PRB2P02812 416 aaPredicted RBP10.02□□□□□ -0.81
COL6A1-201ENST00000361866 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
COL6A1-201ENST00000361866 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.81
COL6A1-201ENST00000361866 Q8N2B8 174 aa10.02□□□□□ -0.81
COL6A1-201ENST00000361866 COX7CP15954 63 aa10.01□□□□□ -0.81
COL6A1-201ENST00000361866 ATMQ13315 3056 aa10.01□□□□□ -0.81
COL6A1-201ENST00000361866 IGKV2D-24A0A075B6R9 120 aa10.01□□□□□ -0.81
COL6A1-201ENST00000361866 USP17L23D6RBM5 183 aa10.01□□□□□ -0.81
COL6A1-201ENST00000361866 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
COL6A1-201ENST00000361866 HECTD1Q9ULT8 2610 aa10□□□□□ -0.81
COL6A1-201ENST00000361866 PLA2G2AP14555 144 aa10□□□□□ -0.81
COL6A1-201ENST00000361866 CXCL5P42830 114 aa10□□□□□ -0.81
COL6A1-201ENST00000361866 UPK3BQ9BT76 320 aa10□□□□□ -0.81
COL6A1-201ENST00000361866 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
COL6A1-201ENST00000361866 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
COL6A1-201ENST00000361866 APOC4P55056 127 aa9.99□□□□□ -0.81
COL6A1-201ENST00000361866 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
COL6A1-201ENST00000361866 CHCHD10Q8WYQ3 142 aaPredicted RBP9.99□□□□□ -0.81
COL6A1-201ENST00000361866 IMUPQ9GZP8 106 aa9.99□□□□□ -0.81
COL6A1-201ENST00000361866 A0A087WYN8 130 aa9.99□□□□□ -0.81
COL6A1-201ENST00000361866 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
COL6A1-201ENST00000361866 REG3AQ06141 175 aa9.98□□□□□ -0.81
COL6A1-201ENST00000361866 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
COL6A1-201ENST00000361866 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
COL6A1-201ENST00000361866 BBC3Q96PG8 261 aaPredicted RBP9.98□□□□□ -0.81
COL6A1-201ENST00000361866 ZZEF1O43149 2961 aa9.98□□□□□ -0.81
COL6A1-201ENST00000361866 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
COL6A1-201ENST00000361866 LRRC75A-AS1Q8N1F1 130 aa9.97□□□□□ -0.81
COL6A1-201ENST00000361866 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms