RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ATP6V0E2Q8NHE4 81 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 RPL36ALQ969Q0 106 aaKnown RBP5.18□□□□□ -1.58
CLCN3-202ENST00000360642 C16orf95Q9H693 158 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 ANK3Q12955 4377 aaKnown RBP5.18□□□□□ -1.58
CLCN3-202ENST00000360642 J3QR89 54 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 GIG44P09565 113 aaPredicted RBP5.18□□□□□ -1.58
CLCN3-202ENST00000360642 INSL3P51460 131 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
CLCN3-202ENST00000360642 IGHV3OR16-12A0A075B7B8 117 aa5.17□□□□□ -1.58
CLCN3-202ENST00000360642 C1QTNF4Q9BXJ3 329 aa5.17□□□□□ -1.58
CLCN3-202ENST00000360642 SPANXDQ9BXN6 97 aa5.17□□□□□ -1.58
CLCN3-202ENST00000360642 SPANXCQ9NY87 97 aa5.17□□□□□ -1.58
CLCN3-202ENST00000360642 TSSC4Q9Y5U2 329 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-202ENST00000360642 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-202ENST00000360642 ADAMTSL4-AS1Q5T5F5 129 aa5.17□□□□□ -1.58
CLCN3-202ENST00000360642 FAM19A3Q7Z5A8 133 aa5.17□□□□□ -1.58
CLCN3-202ENST00000360642 LINC01006Q8NI28 216 aa5.17□□□□□ -1.58
CLCN3-202ENST00000360642 SETXQ7Z333 2677 aaKnown RBP5.17□□□□□ -1.58
CLCN3-202ENST00000360642 TRGV1A0A0A0MS02 117 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 TRBV10-1A0A0K0K1A3 114 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 ZFAND6Q6FIF0 208 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.16□□□□□ -1.58
CLCN3-202ENST00000360642 NDUFA12Q9UI09 145 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 SPINK8P0C7L1 97 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 Q6ZTI0 123 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 CDKN2A-AS1Q9UH64 79 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 CSDC2Q9Y534 153 aaKnown RBP5.16□□□□□ -1.58
CLCN3-202ENST00000360642 HECTD1Q9ULT8 2610 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 TRAV4A0A0B4J268 109 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 PLAC8L1A1L4L8 177 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 CMC4P56277 68 aaPredicted RBP5.16□□□□□ -1.58
CLCN3-202ENST00000360642 DAZ2Q13117 558 aaKnown RBP5.16□□□□□ -1.58
CLCN3-202ENST00000360642 ERG28Q9UKR5 140 aa5.16□□□□□ -1.58
CLCN3-202ENST00000360642 K7EQD1 137 aa5.15□□□□□ -1.58
CLCN3-202ENST00000360642 LINC00694P0DN24 101 aa5.15□□□□□ -1.58
CLCN3-202ENST00000360642 COX6A2Q02221 97 aa5.15□□□□□ -1.58
CLCN3-202ENST00000360642 MRPL23Q16540 153 aaKnown RBP5.15□□□□□ -1.58
CLCN3-202ENST00000360642 NTM-AS1Q6ZSK4 140 aa5.15□□□□□ -1.58
CLCN3-202ENST00000360642 DAZ4Q86SG3 579 aaKnown RBP5.15□□□□□ -1.58
CLCN3-202ENST00000360642 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.58
CLCN3-202ENST00000360642 DAZ3Q9NR90 486 aaKnown RBP5.15□□□□□ -1.58
CLCN3-202ENST00000360642 PDZD2O15018 2839 aa5.15□□□□□ -1.58
CLCN3-202ENST00000360642 TIMM17BO60830 172 aa5.15□□□□□ -1.59
CLCN3-202ENST00000360642 IGLV1-51P01701 117 aa5.15□□□□□ -1.59
CLCN3-202ENST00000360642 MIAQ16674 131 aa5.15□□□□□ -1.59
CLCN3-202ENST00000360642 ZNF418Q8TF45 676 aaPredicted RBP5.15□□□□□ -1.59
CLCN3-202ENST00000360642 TMEM101Q96IK0 257 aa5.15□□□□□ -1.59
CLCN3-202ENST00000360642 FN1P02751 2386 aaKnown RBP5.14□□□□□ -1.59
CLCN3-202ENST00000360642 M0QXV9 152 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 SCGB1C2P0DMR2 95 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 LINC00242Q5T6M2 205 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 TEN1Q86WV5 123 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 CSNK1G2-AS1Q8NCQ2 148 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 MPLKIPQ8TAP9 179 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 SIGMAR1Q99720 223 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 GCN1Q92616 2671 aaKnown RBP5.14□□□□□ -1.59
CLCN3-202ENST00000360642 TRBV30A0A0K0K1B3 111 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 NDUFA1O15239 70 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 RPL36AP83881 106 aaKnown RBP5.14□□□□□ -1.59
CLCN3-202ENST00000360642 CARD19Q96LW7 228 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 WFDC10AQ9H1F0 79 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 HERVK_113P63121 156 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 NOP10Q9NPE3 64 aaKnown RBP5.14□□□□□ -1.59
CLCN3-202ENST00000360642 NBEAL2Q6ZNJ1 2754 aa5.14□□□□□ -1.59
CLCN3-202ENST00000360642 C16orf74Q96GX8 76 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 LINC01600Q96MT4 127 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 GTSF1LQ9H1H1 148 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 H7C2G1 150 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 NPC2P61916 151 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 PPDPFLQ8WWR9 84 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 CDC42SE2Q9NRR3 84 aa5.13□□□□□ -1.59
CLCN3-202ENST00000360642 SCGB1A1P11684 91 aa5.12□□□□□ -1.59
CLCN3-202ENST00000360642 IFITM1P13164 125 aa5.12□□□□□ -1.59
CLCN3-202ENST00000360642 NDUFA7O95182 113 aa5.12□□□□□ -1.59
CLCN3-202ENST00000360642 SMIM1B2RUZ4 78 aa5.12□□□□□ -1.59
CLCN3-202ENST00000360642 SLC25A20O43772 301 aa5.12□□□□□ -1.59
CLCN3-202ENST00000360642 GAGE5Q13069 117 aa5.12□□□□□ -1.59
CLCN3-202ENST00000360642 C11orf45Q8TAV5 145 aa5.12□□□□□ -1.59
CLCN3-202ENST00000360642 TRBV6-4A0A1B0GX49 114 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 F5H768 121 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 HILS1P60008 231 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 ATXN8Q156A1 80 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 ANKRD29Q8N6D5 301 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 C9JAW5 83 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 Q1RN00 199 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 ICOSQ9Y6W8 199 aa5.11□□□□□ -1.59
CLCN3-202ENST00000360642 H7C423 109 aa5.1□□□□□ -1.59
CLCN3-202ENST00000360642 SMAGPQ0VAQ4 97 aa5.1□□□□□ -1.59
CLCN3-202ENST00000360642 KMT2BQ9UMN6 2715 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-202ENST00000360642 TRAV13-1A0A0B4J241 112 aa5.1□□□□□ -1.59
CLCN3-202ENST00000360642 DAND5Q8N907 189 aa5.1□□□□□ -1.59
CLCN3-202ENST00000360642 ZNF625Q96I27 306 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-202ENST00000360642 SMR3AQ99954 134 aa5.1□□□□□ -1.59
CLCN3-202ENST00000360642 VWFP04275 2813 aa5.1□□□□□ -1.59
CLCN3-202ENST00000360642 FLNBO75369 2602 aaKnown RBP5.1□□□□□ -1.59
CLCN3-202ENST00000360642 LOC100131303A0A0U1RQF7 123 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms