RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 SHISA2Q6UWI4 295 aa14.5□□□□□ -0.09
CBWD3-201ENST00000360171 H3BT86 120 aa14.49□□□□□ -0.09
CBWD3-201ENST00000360171 C1orf158Q8N1D5 194 aa14.49□□□□□ -0.09
CBWD3-201ENST00000360171 COL6A5A8TX70 2615 aa14.48□□□□□ -0.09
CBWD3-201ENST00000360171 FAM19A3Q7Z5A8 133 aa14.48□□□□□ -0.09
CBWD3-201ENST00000360171 WIPF1O43516 503 aa14.47□□□□□ -0.09
CBWD3-201ENST00000360171 CDKN2A-AS1Q9UH64 79 aa14.47□□□□□ -0.09
CBWD3-201ENST00000360171 IGLV5-39A0A0G2JS06 123 aa14.46□□□□□ -0.1
CBWD3-201ENST00000360171 A8MZ25 164 aa14.46□□□□□ -0.1
CBWD3-201ENST00000360171 HERVK_113P63121 156 aa14.46□□□□□ -0.1
CBWD3-201ENST00000360171 UBE2WQ96B02 151 aa14.46□□□□□ -0.1
CBWD3-201ENST00000360171 TMEM101Q96IK0 257 aa14.46□□□□□ -0.1
CBWD3-201ENST00000360171 IGHV3OR16-12A0A075B7B8 117 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 IGHV3-38A0A0C4DH36 116 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 H7C423 109 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 LST1O00453 97 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 CIRBPQ14011 172 aaKnown RBP14.44□□□□□ -0.1
CBWD3-201ENST00000360171 IL17DQ8TAD2 202 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 CSDC2Q9Y534 153 aaKnown RBP14.44□□□□□ -0.1
CBWD3-201ENST00000360171 CMYA5Q8N3K9 4069 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 DGAT2L7PQ6IED9 249 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 C2orf82Q6UX34 121 aa14.44□□□□□ -0.1
CBWD3-201ENST00000360171 PKD1L1Q8TDX9 2849 aa14.43□□□□□ -0.1
CBWD3-201ENST00000360171 TEX49A0A1B0GTD5 131 aa14.42□□□□□ -0.1
CBWD3-201ENST00000360171 CSNK1G2-AS1Q8NCQ2 148 aa14.42□□□□□ -0.1
CBWD3-201ENST00000360171 COPS9Q8WXC6 57 aa14.42□□□□□ -0.1
CBWD3-201ENST00000360171 TRAV8-4A0A0B4J246 113 aa14.41□□□□□ -0.1
CBWD3-201ENST00000360171 TRBV10-1A0A0K0K1A3 114 aa14.41□□□□□ -0.1
CBWD3-201ENST00000360171 OXLD1Q5BKU9 147 aa14.41□□□□□ -0.1
CBWD3-201ENST00000360171 Q6Q795 121 aa14.41□□□□□ -0.1
CBWD3-201ENST00000360171 TRAV26-1A0A087WT03 109 aa14.4□□□□□ -0.1
CBWD3-201ENST00000360171 SNCGO76070 127 aa14.4□□□□□ -0.1
CBWD3-201ENST00000360171 DEFB121Q5J5C9 76 aa14.4□□□□□ -0.1
CBWD3-201ENST00000360171 LINC00242Q5T6M2 205 aa14.4□□□□□ -0.1
CBWD3-201ENST00000360171 NPC2P61916 151 aa14.39□□□□□ -0.11
CBWD3-201ENST00000360171 COX6A2Q02221 97 aa14.39□□□□□ -0.11
CBWD3-201ENST00000360171 PPDPFQ9H3Y8 114 aa14.39□□□□□ -0.11
CBWD3-201ENST00000360171 MRPL23Q16540 153 aaKnown RBP14.39□□□□□ -0.11
CBWD3-201ENST00000360171 LINC00308Q8TCZ7 52 aa14.39□□□□□ -0.11
CBWD3-201ENST00000360171 FAM240AA0A1B0GVK7 77 aa14.38□□□□□ -0.11
CBWD3-201ENST00000360171 DAZ2Q13117 558 aaKnown RBP14.38□□□□□ -0.11
CBWD3-201ENST00000360171 DAZ4Q86SG3 579 aaKnown RBP14.38□□□□□ -0.11
CBWD3-201ENST00000360171 DAZ3Q9NR90 486 aaKnown RBP14.38□□□□□ -0.11
CBWD3-201ENST00000360171 RPL36AP83881 106 aaKnown RBP14.37□□□□□ -0.11
CBWD3-201ENST00000360171 GAGE2BQ13066 116 aa14.37□□□□□ -0.11
CBWD3-201ENST00000360171 GAGE2EQ4V326 116 aa14.37□□□□□ -0.11
CBWD3-201ENST00000360171 CLEC2BQ92478 149 aa14.37□□□□□ -0.11
CBWD3-201ENST00000360171 RPL36ALQ969Q0 106 aaKnown RBP14.37□□□□□ -0.11
CBWD3-201ENST00000360171 Q9H8V8 135 aa14.37□□□□□ -0.11
CBWD3-201ENST00000360171 GAGE2DQ9UEU5 116 aa14.37□□□□□ -0.11
CBWD3-201ENST00000360171 ANAPC13Q9BS18 74 aa14.37□□□□□ -0.11
CBWD3-201ENST00000360171 SMIM1B2RUZ4 78 aa14.36□□□□□ -0.11
CBWD3-201ENST00000360171 K7EQD1 137 aa14.36□□□□□ -0.11
CBWD3-201ENST00000360171 ANK2Q01484 3957 aa14.35□□□□□ -0.11
CBWD3-201ENST00000360171 KRTAP10-11P60412 298 aa14.35□□□□□ -0.11
CBWD3-201ENST00000360171 DAND5Q8N907 189 aa14.35□□□□□ -0.11
CBWD3-201ENST00000360171 TRGV1A0A0A0MS02 117 aa14.34□□□□□ -0.11
CBWD3-201ENST00000360171 TRAV4A0A0B4J268 109 aa14.34□□□□□ -0.11
CBWD3-201ENST00000360171 LINC00694P0DN24 101 aa14.34□□□□□ -0.11
CBWD3-201ENST00000360171 HERV-K104P63124 156 aa14.33□□□□□ -0.11
CBWD3-201ENST00000360171 ZNF625Q96I27 306 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-201ENST00000360171 PLAC8L1A1L4L8 177 aa14.32□□□□□ -0.12
CBWD3-201ENST00000360171 NTM-AS1Q6ZSK4 140 aa14.32□□□□□ -0.12
CBWD3-201ENST00000360171 CDC42SE2Q9NRR3 84 aa14.32□□□□□ -0.12
CBWD3-201ENST00000360171 COX7A2LO14548 114 aa14.32□□□□□ -0.12
CBWD3-201ENST00000360171 EGFEM1PQ0D2K5 195 aa14.32□□□□□ -0.12
CBWD3-201ENST00000360171 F5H768 121 aa14.31□□□□□ -0.12
CBWD3-201ENST00000360171 C15orf53Q8NAA6 179 aa14.31□□□□□ -0.12
CBWD3-201ENST00000360171 IGHV4-30-4P0DP06 118 aa14.3□□□□□ -0.12
CBWD3-201ENST00000360171 MDFIQ99750 246 aa14.3□□□□□ -0.12
CBWD3-201ENST00000360171 NDUFV3P56181 108 aaKnown RBP14.29□□□□□ -0.12
CBWD3-201ENST00000360171 C16orf74Q96GX8 76 aa14.29□□□□□ -0.12
CBWD3-201ENST00000360171 NHLRC4P0CG21 123 aaPredicted RBP14.29□□□□□ -0.12
CBWD3-201ENST00000360171 SOSTDC1Q6X4U4 206 aa14.29□□□□□ -0.12
CBWD3-201ENST00000360171 Q6ZTI0 123 aa14.29□□□□□ -0.12
CBWD3-201ENST00000360171 TRAV13-1A0A0B4J241 112 aa14.28□□□□□ -0.12
CBWD3-201ENST00000360171 KIR2DL5BQ8NHK3 375 aa14.28□□□□□ -0.12
CBWD3-201ENST00000360171 NBEAL2Q6ZNJ1 2754 aa14.28□□□□□ -0.12
CBWD3-201ENST00000360171 NOP10Q9NPE3 64 aaKnown RBP14.27□□□□□ -0.12
CBWD3-201ENST00000360171 APOC4P55056 127 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 DEFB135Q30KP9 77 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 TTC32Q5I0X7 151 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 MEIG1Q5JSS6 88 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 X6R8D5 127 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 DNAH3Q8TD57 4116 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 TRACP01848 142 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 GAGE5Q13069 117 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 GAGE6Q13070 117 aa14.26□□□□□ -0.13
CBWD3-201ENST00000360171 ACYP1P07311 99 aa14.25□□□□□ -0.13
CBWD3-201ENST00000360171 TMEM243Q9BU79 118 aa14.25□□□□□ -0.13
CBWD3-201ENST00000360171 GAGE12JA6NER3 117 aa14.23□□□□□ -0.13
CBWD3-201ENST00000360171 GAGE4Q13068 117 aa14.23□□□□□ -0.13
CBWD3-201ENST00000360171 UBE2L6O14933 153 aa14.23□□□□□ -0.13
CBWD3-201ENST00000360171 FAM222AQ5U5X8 452 aa14.22□□□□□ -0.13
CBWD3-201ENST00000360171 OVOL2Q9BRP0 275 aa14.22□□□□□ -0.13
CBWD3-201ENST00000360171 A0A0U1RRA0 63 aa14.21□□□□□ -0.13
CBWD3-201ENST00000360171 TRBV6-4A0A1B0GX49 114 aa14.21□□□□□ -0.13
CBWD3-201ENST00000360171 TRBV7-7A0A0K0K1E9 115 aa14.2□□□□□ -0.14
CBWD3-201ENST00000360171 GAGE7O76087 117 aa14.2□□□□□ -0.14
CBWD3-201ENST00000360171 GAGE12FP0CL80 117 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms