RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 Q9H3A6 140 aa4.39□□□□□ -1.71
CCDC196-201ENST00000359454 OTORQ9NRC9 128 aa4.39□□□□□ -1.71
CCDC196-201ENST00000359454 EPDR1Q9UM22 224 aa4.39□□□□□ -1.71
CCDC196-201ENST00000359454 IGHV1-24A0A0C4DH33 117 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 RBAKDNA6NC62 111 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 PEX7O00628 323 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 TRACP01848 142 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 COX7CP15954 63 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 LYZP61626 148 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 CD164L2Q6UWJ8 174 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 PATE2Q6UY27 113 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 Q6ZQT7 251 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 CEND1Q8N111 149 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 NTN5Q8WTR8 489 aaPredicted RBP4.38□□□□□ -1.71
CCDC196-201ENST00000359454 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 CHCHD5Q9BSY4 110 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 UPK3BQ9BT76 320 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 SHANK2-AS3Q9BTD1 123 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 AAMDCQ9H7C9 122 aa4.38□□□□□ -1.71
CCDC196-201ENST00000359454 PLAC8L1A1L4L8 177 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 PGPA6NDG6 321 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 H3BRN7 92 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 PRM2P04554 102 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 SPINK13Q1W4C9 94 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 CENPWQ5EE01 88 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 FXYD5Q96DB9 178 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 GFRA4Q9GZZ7 299 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 AGPAT4-IT1Q9H0P7 198 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 ZNF492Q9P255 531 aa4.37□□□□□ -1.71
CCDC196-201ENST00000359454 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 A8MWV9 139 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 H7C1H1 209 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 LEPROTL1O95214 131 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 ESRGQ1W209 222 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 ZC2HC1BQ5TFG8 222 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 Q5VSD8 79 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 ATP5L2Q7Z4Y8 100 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 AMN1Q8IY45 258 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
CCDC196-201ENST00000359454 C16orf74Q96GX8 76 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
CCDC196-201ENST00000359454 TIMM8BQ9Y5J9 83 aaPredicted RBP4.36□□□□□ -1.71
CCDC196-201ENST00000359454 DMBT1Q9UGM3 2413 aaPredicted RBP4.35□□□□□ -1.71
CCDC196-201ENST00000359454 TRBV20OR9-2A0A075B6H5 130 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 TRBV19A0A075B6N1 114 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 TRAV12-2A0A075B6T6 113 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 TRAV13-1A0A0B4J241 112 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 SMIM27A0A1W2PRY6 76 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 H3BNG1 76 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 TCRAP04437 139 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 MGST1P10620 155 aaKnown RBP4.35□□□□□ -1.71
CCDC196-201ENST00000359454 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
CCDC196-201ENST00000359454 FXYD2P54710 66 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 LINC00315P59091 139 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 ZNF493Q6ZR52 646 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 TMEM75Q8N9X5 138 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 FAM19A4Q96LR4 140 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 C17orf77Q96MU5 243 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 SLC50A1Q9BRV3 221 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 NOP10Q9NPE3 64 aaKnown RBP4.35□□□□□ -1.71
CCDC196-201ENST00000359454 ZNF331Q9NQX6 463 aaPredicted RBP4.35□□□□□ -1.71
CCDC196-201ENST00000359454 V9GYV3 84 aa4.35□□□□□ -1.71
CCDC196-201ENST00000359454 TRAV8-2A0A0B4J237 113 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 A0A0J9YY99 117 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 LTAP01374 205 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 P01737 135 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 SCGB1C2P0DMR2 95 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 PYYP10082 97 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 HTN1P15515 57 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
CCDC196-201ENST00000359454 RNF182Q8N6D2 247 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 LINC00612Q8N6U2 182 aa4.34□□□□□ -1.71
CCDC196-201ENST00000359454 TMEM263Q8WUH6 116 aaKnown RBP4.34□□□□□ -1.71
CCDC196-201ENST00000359454 APOBP04114 4563 aaKnown RBP4.34□□□□□ -1.72
CCDC196-201ENST00000359454 TRAV8-4A0A0B4J246 113 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 K7ERJ3 54 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 IGLV2-8P01709 118 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 IGKCP01834 107 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 GATA1P15976 413 aaPredicted RBP4.33□□□□□ -1.72
CCDC196-201ENST00000359454 MORN5Q5VZ52 161 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 COX8CQ7Z4L0 72 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 LINC01561Q8N1V8 128 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 OR8A1Q8NGG7 326 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 URB1-AS1Q96HZ7 61 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 C2orf48Q96LS8 159 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
CCDC196-201ENST00000359454 LAMTOR3Q9UHA4 124 aa4.33□□□□□ -1.72
CCDC196-201ENST00000359454 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 MRPS12O15235 138 aaKnown RBP4.32□□□□□ -1.72
CCDC196-201ENST00000359454 VPREB1P12018 145 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 FUSP35637 526 aaKnown RBP eCLIP4.32□□□□□ -1.72
CCDC196-201ENST00000359454 KRTAP10-1P60331 282 aa4.32□□□□□ -1.72
CCDC196-201ENST00000359454 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms