RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 CDC42SE2Q9NRR3 84 aa9.41□□□□□ -0.9
NLRC3-202ENST00000359128 PCDH15Q96QU1 1955 aa9.41□□□□□ -0.9
NLRC3-202ENST00000359128 FAM208BQ5VWN6 2430 aa9.4□□□□□ -0.9
NLRC3-202ENST00000359128 NRACQ8N912 160 aa9.4□□□□□ -0.9
NLRC3-202ENST00000359128 SMIM11BQ8TCY0 68 aa9.4□□□□□ -0.9
NLRC3-202ENST00000359128 RAI1Q7Z5J4 1906 aaPredicted RBP9.4□□□□□ -0.9
NLRC3-202ENST00000359128 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
NLRC3-202ENST00000359128 G3V4G9 280 aa9.39□□□□□ -0.91
NLRC3-202ENST00000359128 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.39□□□□□ -0.91
NLRC3-202ENST00000359128 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
NLRC3-202ENST00000359128 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
NLRC3-202ENST00000359128 C11orf21Q9P2W6 132 aa9.38□□□□□ -0.91
NLRC3-202ENST00000359128 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
NLRC3-202ENST00000359128 Q8N9L7 120 aa9.38□□□□□ -0.91
NLRC3-202ENST00000359128 LRP4O75096 1905 aa9.38□□□□□ -0.91
NLRC3-202ENST00000359128 C20orf197Q8N268 126 aa9.38□□□□□ -0.91
NLRC3-202ENST00000359128 PIEZO1Q92508 2521 aa9.38□□□□□ -0.91
NLRC3-202ENST00000359128 ACACBO00763 2458 aa9.38□□□□□ -0.91
NLRC3-202ENST00000359128 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
NLRC3-202ENST00000359128 MRPL55Q7Z7F7 128 aaKnown RBP9.36□□□□□ -0.91
NLRC3-202ENST00000359128 CUL9Q8IWT3 2517 aa9.36□□□□□ -0.91
NLRC3-202ENST00000359128 LST1O00453 97 aa9.36□□□□□ -0.91
NLRC3-202ENST00000359128 NDUFV3P56181 108 aaKnown RBP9.36□□□□□ -0.91
NLRC3-202ENST00000359128 ESRGQ1W209 222 aa9.36□□□□□ -0.91
NLRC3-202ENST00000359128 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
NLRC3-202ENST00000359128 FHL2Q14192 279 aa9.35□□□□□ -0.91
NLRC3-202ENST00000359128 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
NLRC3-202ENST00000359128 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
NLRC3-202ENST00000359128 CRIP2P52943 208 aaPredicted RBP9.35□□□□□ -0.91
NLRC3-202ENST00000359128 FREM1Q5H8C1 2179 aa9.35□□□□□ -0.91
NLRC3-202ENST00000359128 PCNX3Q9H6A9 2034 aa9.34□□□□□ -0.91
NLRC3-202ENST00000359128 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
NLRC3-202ENST00000359128 PTPRQQ9UMZ3 2332 aa9.34□□□□□ -0.91
NLRC3-202ENST00000359128 F8WDY8 70 aa9.33□□□□□ -0.92
NLRC3-202ENST00000359128 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
NLRC3-202ENST00000359128 CREBBPQ92793 2442 aa9.33□□□□□ -0.92
NLRC3-202ENST00000359128 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
NLRC3-202ENST00000359128 PLCE1Q9P212 2302 aa9.32□□□□□ -0.92
NLRC3-202ENST00000359128 IGHV6-1A0A0B4J1U7 121 aa9.32□□□□□ -0.92
NLRC3-202ENST00000359128 ADAMTS20P59510 1910 aa9.32□□□□□ -0.92
NLRC3-202ENST00000359128 FHL3Q13643 280 aa9.31□□□□□ -0.92
NLRC3-202ENST00000359128 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
NLRC3-202ENST00000359128 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
NLRC3-202ENST00000359128 V9GYY9 64 aa9.31□□□□□ -0.92
NLRC3-202ENST00000359128 LINC00337Q8N6G1 96 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 X6R8D5 127 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 TANC2Q9HCD6 1990 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 Q9BRP9 147 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 PRYO14603 147 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 TNCP24821 2201 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 TRBV10-3A0A0K0K1G6 114 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
NLRC3-202ENST00000359128 RNASE8Q8TDE3 154 aaKnown RBP9.3□□□□□ -0.92
NLRC3-202ENST00000359128 IGLV4-60A0A075B6I1 120 aa9.29□□□□□ -0.92
NLRC3-202ENST00000359128 COX6A2Q02221 97 aa9.29□□□□□ -0.92
NLRC3-202ENST00000359128 UQCRQO14949 82 aa9.29□□□□□ -0.92
NLRC3-202ENST00000359128 POM121L12Q8N7R1 296 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 MDFIQ99750 246 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 OTOGLQ3ZCN5 2332 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 LINC00242Q5T6M2 205 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 Q6JHZ5 121 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 SNURFQ9Y675 71 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 A0A1W2PPR1 153 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
NLRC3-202ENST00000359128 ZNF580Q9UK33 172 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 PTPRSQ13332 1948 aa9.28□□□□□ -0.92
NLRC3-202ENST00000359128 ATP5EP56381 51 aaPredicted RBP9.28□□□□□ -0.92
NLRC3-202ENST00000359128 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
NLRC3-202ENST00000359128 C2orf48Q96LS8 159 aa9.27□□□□□ -0.93
NLRC3-202ENST00000359128 NDUFC1O43677 76 aa9.27□□□□□ -0.93
NLRC3-202ENST00000359128 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
NLRC3-202ENST00000359128 DSCAML1Q8TD84 2053 aa9.26□□□□□ -0.93
NLRC3-202ENST00000359128 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
NLRC3-202ENST00000359128 SHANK1Q9Y566 2161 aa9.26□□□□□ -0.93
NLRC3-202ENST00000359128 PRR4Q16378 134 aa9.25□□□□□ -0.93
NLRC3-202ENST00000359128 ATG2AQ2TAZ0 1938 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 MED13LQ71F56 2210 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 LINC00694P0DN24 101 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 SMIM1B2RUZ4 78 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 Q8N814 137 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
NLRC3-202ENST00000359128 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
NLRC3-202ENST00000359128 CPAMD8Q8IZJ3 1885 aa9.22□□□□□ -0.93
NLRC3-202ENST00000359128 EXPH5Q8NEV8 1989 aa9.22□□□□□ -0.93
NLRC3-202ENST00000359128 PRR3P79522 188 aaKnown RBP9.22□□□□□ -0.93
NLRC3-202ENST00000359128 CNFNQ9BYD5 112 aa9.22□□□□□ -0.93
NLRC3-202ENST00000359128 A6NED7 52 aa9.22□□□□□ -0.93
NLRC3-202ENST00000359128 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
NLRC3-202ENST00000359128 XGP55808 180 aa9.21□□□□□ -0.94
NLRC3-202ENST00000359128 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
NLRC3-202ENST00000359128 CELA1Q9UNI1 258 aa9.2□□□□□ -0.94
NLRC3-202ENST00000359128 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
NLRC3-202ENST00000359128 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
NLRC3-202ENST00000359128 SPG11Q96JI7 2443 aa9.19□□□□□ -0.94
NLRC3-202ENST00000359128 C10orf142B7Z368 130 aa9.19□□□□□ -0.94
NLRC3-202ENST00000359128 HCFC1P51610 2035 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms