RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 THSD7BQ9C0I4 1608 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 TRBV6-5A0A0K0K1A5 114 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 A6NED7 52 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 IGLV10-54A0A075B6I4 117 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 COL4A6Q14031 1691 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 HIGD2BQ4VC39 106 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 IGHV4OR15-8A0A075B7B6 117 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 A0A087WW49 117 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 POLR2KP53803 58 aaKnown RBP4.52□□□□□ -1.69
VPS13B-203ENST00000358544 SIRPDQ9H106 197 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 SMAD5-AS1Q9Y6J3 95 aa4.52□□□□□ -1.69
VPS13B-203ENST00000358544 MSMBP08118 114 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 ODF3BA8MYP8 253 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 LINC01356Q8N9X3 169 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 ADAMTSL4-AS1Q5T5F5 129 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 UNQ9165/PRO28630Q6UXU0 137 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 MSMPQ1L6U9 139 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 Q8N9W7 124 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 K7ERS5 55 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 C5orf56Q8N8D9 126 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 PDZD2O15018 2839 aa4.51□□□□□ -1.69
VPS13B-203ENST00000358544 LTBP2Q14767 1821 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 GPHB5Q86YW7 130 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 SLURP1P55000 103 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 CRYGAP11844 174 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 SPAG11BQ08648 103 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 IGFL3Q6UXB1 125 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 PSPHP1O15172 72 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 VPREB1P12018 145 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 TMEM254Q8TBM7 123 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 TRBV7-6A0A0J9YX20 115 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 DKK4Q9UBT3 224 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 ZFAND3Q9H8U3 227 aa4.5□□□□□ -1.69
VPS13B-203ENST00000358544 FSTL3O95633 263 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 RNASE3P12724 160 aaKnown RBP4.49□□□□□ -1.69
VPS13B-203ENST00000358544 IGLV2-18A0A075B6J9 118 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 BCE1O60756 84 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 Q6ZQY7 126 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 SBSPONQ8IVN8 264 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 C9orf85Q96MD7 179 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 CASC2Q6XLA1 102 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 NTM-AS1Q6ZSK4 140 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 ESRGQ1W209 222 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
VPS13B-203ENST00000358544 NHLRC4P0CG21 123 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-203ENST00000358544 CCL18P55774 89 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 HILS1P60008 231 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 C6orf99Q4VX62 202 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 FAM19A1Q7Z5A9 133 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 APRG1Q8IVJ8 170 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 UBE2DNLQ8IWF7 75 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 FRYLO94915 3013 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 WFDC13Q8IUB5 93 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 COL27A1Q8IZC6 1860 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-203ENST00000358544 K7ENP7 123 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 LINC00846Q9NV44 126 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 PRYO14603 147 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 Q6ZSV7 163 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 DEFB136Q30KP8 78 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 CELA1Q9UNI1 258 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 Q8N814 137 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 DCANP1Q8TF63 244 aa4.48□□□□□ -1.69
VPS13B-203ENST00000358544 C22orf34Q6ZV56 151 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 COX8CQ7Z4L0 72 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 FAM30AQ9NZY2 134 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 A0A087WYN8 130 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 APOC4P55056 127 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 KLLNB2CW77 178 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 TMEM89A2RUT3 159 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 ZFP36P26651 326 aaKnown RBP4.47□□□□□ -1.69
VPS13B-203ENST00000358544 TENM1Q9UKZ4 2725 aa4.47□□□□□ -1.69
VPS13B-203ENST00000358544 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-203ENST00000358544 ZNF73O43830 326 aaPredicted RBP4.46□□□□□ -1.69
VPS13B-203ENST00000358544 PROK1P58294 105 aa4.46□□□□□ -1.69
VPS13B-203ENST00000358544 IGKV2D-24A0A075B6R9 120 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 H0Y9J4 135 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 FHL3Q13643 280 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 PSMG3-AS1Q96PY0 264 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 EBI3Q14213 229 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 Q6ZTI0 123 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 TRBV10-3A0A0K0K1G6 114 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 LRCOL1A6NCL2 159 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 PSCAO43653 123 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 WFDC10BQ8IUB3 73 aa4.46□□□□□ -1.7
VPS13B-203ENST00000358544 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.46□□□□□ -1.7
VPS13B-203ENST00000358544 LINC01548A6NM66 108 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 COX17Q14061 63 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 Q8N6K4 173 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 UBE2D4Q9Y2X8 147 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 IGHV4-38-2P0DP08 117 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 AMELXQ99217 191 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 CCL24O00175 119 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 SEM1Q6ZVN7 128 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 IGHV4-59P01825 116 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 RPL28P46779 137 aaKnown RBP4.45□□□□□ -1.7
VPS13B-203ENST00000358544 CEP350Q5VT06 3117 aa4.45□□□□□ -1.7
VPS13B-203ENST00000358544 GOLGB1Q14789 3259 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms