RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 ODF3BA8MYP8 253 aa10.74□□□□□ -0.69
USP6-202ENST00000357482 C20orf197Q8N268 126 aa10.74□□□□□ -0.69
USP6-202ENST00000357482 TRAV7A0A075B6U4 112 aa10.73□□□□□ -0.69
USP6-202ENST00000357482 RNF5Q99942 180 aa10.73□□□□□ -0.69
USP6-202ENST00000357482 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
USP6-202ENST00000357482 IGHV1-58A0A0C4DH39 117 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 H3BUX3 64 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 CIRBPQ14011 172 aaKnown RBP10.72□□□□□ -0.69
USP6-202ENST00000357482 LY6EQ16553 131 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 LINC01006Q8NI28 216 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 OBSCN-AS1Q96MR7 158 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 NDUFA12Q9UI09 145 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 TRBV6-5A0A0K0K1A5 114 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 ADAMTSL4-AS1Q5T5F5 129 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 DPM3Q9P2X0 92 aa10.72□□□□□ -0.69
USP6-202ENST00000357482 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
USP6-202ENST00000357482 MGPP08493 103 aa10.71□□□□□ -0.69
USP6-202ENST00000357482 C9orf47Q6ZRZ4 202 aa10.71□□□□□ -0.69
USP6-202ENST00000357482 Q6ZSV7 163 aa10.71□□□□□ -0.69
USP6-202ENST00000357482 PRR15Q8IV56 129 aa10.71□□□□□ -0.69
USP6-202ENST00000357482 SMAD5-AS1Q9Y6J3 95 aa10.71□□□□□ -0.69
USP6-202ENST00000357482 A0A087WVE0 104 aa10.7□□□□□ -0.7
USP6-202ENST00000357482 NXPH4O95158 308 aa10.7□□□□□ -0.7
USP6-202ENST00000357482 PHLDA3Q9Y5J5 127 aa10.7□□□□□ -0.7
USP6-202ENST00000357482 CCKP06307 115 aa10.7□□□□□ -0.7
USP6-202ENST00000357482 PRB4P10163 310 aaPredicted RBP10.7□□□□□ -0.7
USP6-202ENST00000357482 Q6ZRU5 148 aa10.7□□□□□ -0.7
USP6-202ENST00000357482 LINC00846Q9NV44 126 aa10.7□□□□□ -0.7
USP6-202ENST00000357482 TRAV12-3A0A0B4J271 114 aa10.69□□□□□ -0.7
USP6-202ENST00000357482 TRBV7-6A0A0J9YX20 115 aa10.69□□□□□ -0.7
USP6-202ENST00000357482 PLXNB1O43157 2135 aa10.69□□□□□ -0.7
USP6-202ENST00000357482 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
USP6-202ENST00000357482 RPL39P62891 51 aaKnown RBP10.68□□□□□ -0.7
USP6-202ENST00000357482 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
USP6-202ENST00000357482 PF4P02776 101 aa10.68□□□□□ -0.7
USP6-202ENST00000357482 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
USP6-202ENST00000357482 PROK1P58294 105 aa10.68□□□□□ -0.7
USP6-202ENST00000357482 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
USP6-202ENST00000357482 ZNF561-AS1K7EIQ3 104 aa10.67□□□□□ -0.7
USP6-202ENST00000357482 KRTAP10-3P60369 221 aa10.67□□□□□ -0.7
USP6-202ENST00000357482 MINOS1Q5TGZ0 78 aa10.67□□□□□ -0.7
USP6-202ENST00000357482 MINOS1-NBL1R4GNA1 71 aa10.67□□□□□ -0.7
USP6-202ENST00000357482 MGAM2Q2M2H8 2515 aa10.67□□□□□ -0.7
USP6-202ENST00000357482 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
USP6-202ENST00000357482 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
USP6-202ENST00000357482 SOCS3O14543 225 aa10.66□□□□□ -0.7
USP6-202ENST00000357482 PLAC8L1A1L4L8 177 aa10.66□□□□□ -0.7
USP6-202ENST00000357482 RBM3P98179 157 aaKnown RBP10.66□□□□□ -0.7
USP6-202ENST00000357482 A0A0J9YXV3 536 aa10.65□□□□□ -0.7
USP6-202ENST00000357482 APELAP0DMC3 54 aa10.65□□□□□ -0.7
USP6-202ENST00000357482 RNASE4P34096 147 aaKnown RBP10.65□□□□□ -0.7
USP6-202ENST00000357482 IGHV3-64A0A075B6Q5 118 aa10.64□□□□□ -0.71
USP6-202ENST00000357482 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
USP6-202ENST00000357482 KIF25-AS1Q9Y6Z4 181 aa10.64□□□□□ -0.71
USP6-202ENST00000357482 RPL28P46779 137 aaKnown RBP10.64□□□□□ -0.71
USP6-202ENST00000357482 Q8N2B8 174 aa10.63□□□□□ -0.71
USP6-202ENST00000357482 C11orf44Q8N8P7 122 aa10.63□□□□□ -0.71
USP6-202ENST00000357482 TRAV13-2A0A0B4J235 113 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 NDUFA1O15239 70 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 LINC00315P59091 139 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 IGFL4Q6B9Z1 124 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 HIST2H2BDQ6DRA6 164 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 C20orf203Q8NBC4 194 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 NPBQ8NG41 125 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 FAM110DQ8TAY7 271 aaPredicted RBP10.62□□□□□ -0.71
USP6-202ENST00000357482 LINC00308Q8TCZ7 52 aa10.62□□□□□ -0.71
USP6-202ENST00000357482 PKD1L1Q8TDX9 2849 aa10.61□□□□□ -0.71
USP6-202ENST00000357482 IGLV4-3A0A075B6K6 122 aa10.61□□□□□ -0.71
USP6-202ENST00000357482 IBA57-AS1B1ANH7 110 aa10.61□□□□□ -0.71
USP6-202ENST00000357482 Q8N6K4 173 aa10.61□□□□□ -0.71
USP6-202ENST00000357482 TRAV23DV6A0A075B6W5 121 aa10.6□□□□□ -0.71
USP6-202ENST00000357482 H0YGX0 51 aa10.6□□□□□ -0.71
USP6-202ENST00000357482 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
USP6-202ENST00000357482 A6NDX4 124 aa10.6□□□□□ -0.71
USP6-202ENST00000357482 BLCAPP62952 87 aa10.6□□□□□ -0.71
USP6-202ENST00000357482 RETNQ9HD89 108 aa10.6□□□□□ -0.71
USP6-202ENST00000357482 ADARB2-AS1A8MUL3 147 aa10.59□□□□□ -0.71
USP6-202ENST00000357482 SUMO4Q6EEV6 95 aa10.59□□□□□ -0.71
USP6-202ENST00000357482 ZNF702PQ9H963 129 aa10.59□□□□□ -0.71
USP6-202ENST00000357482 C14orf132Q9NPU4 83 aa10.59□□□□□ -0.71
USP6-202ENST00000357482 MEGF8Q7Z7M0 2845 aa10.58□□□□□ -0.72
USP6-202ENST00000357482 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
USP6-202ENST00000357482 F8WEM9 126 aa10.57□□□□□ -0.72
USP6-202ENST00000357482 F8W735 103 aaPredicted RBP10.56□□□□□ -0.72
USP6-202ENST00000357482 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
USP6-202ENST00000357482 FAM218AQ96MZ4 157 aa10.56□□□□□ -0.72
USP6-202ENST00000357482 ZNF580Q9UK33 172 aa10.56□□□□□ -0.72
USP6-202ENST00000357482 JMJD7-PLA2G4BH0Y9G9 81 aa10.54□□□□□ -0.72
USP6-202ENST00000357482 CD28P10747 220 aa10.54□□□□□ -0.72
USP6-202ENST00000357482 NDPQ00604 133 aa10.54□□□□□ -0.72
USP6-202ENST00000357482 Q8N9W7 124 aa10.54□□□□□ -0.72
USP6-202ENST00000357482 MOB4Q9Y3A3 225 aa10.54□□□□□ -0.72
USP6-202ENST00000357482 CTSGP08311 255 aa10.54□□□□□ -0.72
USP6-202ENST00000357482 OPRPNQ99935 248 aaPredicted RBP10.54□□□□□ -0.72
USP6-202ENST00000357482 TRRAPQ9Y4A5 3859 aa10.53□□□□□ -0.72
USP6-202ENST00000357482 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
USP6-202ENST00000357482 SS18Q15532 418 aa10.53□□□□□ -0.72
USP6-202ENST00000357482 UBL5Q9BZL1 73 aa10.53□□□□□ -0.72
USP6-202ENST00000357482 WNK1Q9H4A3 2382 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms