RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ZNF702PQ9H963 129 aa11.39□□□□□ -0.59
TRAPPC11-202ENST00000357207 Q6ZQY7 126 aa11.38□□□□□ -0.59
TRAPPC11-202ENST00000357207 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
TRAPPC11-202ENST00000357207 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
TRAPPC11-202ENST00000357207 EDN2P20800 178 aa11.36□□□□□ -0.59
TRAPPC11-202ENST00000357207 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
TRAPPC11-202ENST00000357207 ADAMTSL4-AS1Q5T5F5 129 aa11.36□□□□□ -0.59
TRAPPC11-202ENST00000357207 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
TRAPPC11-202ENST00000357207 SMIM1B2RUZ4 78 aa11.35□□□□□ -0.59
TRAPPC11-202ENST00000357207 C18orf65Q6ZTR6 163 aa11.35□□□□□ -0.59
TRAPPC11-202ENST00000357207 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
TRAPPC11-202ENST00000357207 BBC3Q96PG8 261 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC11-202ENST00000357207 PKIGQ9Y2B9 76 aa11.35□□□□□ -0.59
TRAPPC11-202ENST00000357207 SPTBN4Q9H254 2564 aa11.35□□□□□ -0.59
TRAPPC11-202ENST00000357207 AMELXQ99217 191 aa11.34□□□□□ -0.59
TRAPPC11-202ENST00000357207 CCKP06307 115 aa11.34□□□□□ -0.59
TRAPPC11-202ENST00000357207 Q6JHZ5 121 aa11.34□□□□□ -0.59
TRAPPC11-202ENST00000357207 PRORYQ9H606 182 aa11.34□□□□□ -0.59
TRAPPC11-202ENST00000357207 MTORP42345 2549 aa11.34□□□□□ -0.59
TRAPPC11-202ENST00000357207 CHD8Q9HCK8 2581 aa11.33□□□□□ -0.6
TRAPPC11-202ENST00000357207 UBE2AP49459 152 aa11.33□□□□□ -0.6
TRAPPC11-202ENST00000357207 AVPP01185 164 aa11.32□□□□□ -0.6
TRAPPC11-202ENST00000357207 CHCHD7Q9BUK0 85 aa11.32□□□□□ -0.6
TRAPPC11-202ENST00000357207 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
TRAPPC11-202ENST00000357207 MPLKIPQ8TAP9 179 aa11.32□□□□□ -0.6
TRAPPC11-202ENST00000357207 LINC00526Q96FQ7 95 aa11.31□□□□□ -0.6
TRAPPC11-202ENST00000357207 WFDC10AQ9H1F0 79 aa11.31□□□□□ -0.6
TRAPPC11-202ENST00000357207 HIGD2AQ9BW72 106 aa11.3□□□□□ -0.6
TRAPPC11-202ENST00000357207 CDIP1Q9H305 208 aa11.3□□□□□ -0.6
TRAPPC11-202ENST00000357207 DNAH12Q6ZR08 3092 aa11.3□□□□□ -0.6
TRAPPC11-202ENST00000357207 NDUFC1O43677 76 aa11.3□□□□□ -0.6
TRAPPC11-202ENST00000357207 LINC00482Q8N8I6 264 aa11.3□□□□□ -0.6
TRAPPC11-202ENST00000357207 LINC00694P0DN24 101 aa11.29□□□□□ -0.6
TRAPPC11-202ENST00000357207 Q8IZM0 81 aa11.29□□□□□ -0.6
TRAPPC11-202ENST00000357207 NDUFC2-KCTD14E9PQ53 114 aa11.29□□□□□ -0.6
TRAPPC11-202ENST00000357207 COX6A2Q02221 97 aa11.29□□□□□ -0.6
TRAPPC11-202ENST00000357207 ODF3L2Q3SX64 289 aa11.29□□□□□ -0.6
TRAPPC11-202ENST00000357207 SNURFQ9Y675 71 aa11.29□□□□□ -0.6
TRAPPC11-202ENST00000357207 BRI3O95415 125 aa11.29□□□□□ -0.6
TRAPPC11-202ENST00000357207 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
TRAPPC11-202ENST00000357207 LRRK2Q5S007 2527 aa11.28□□□□□ -0.6
TRAPPC11-202ENST00000357207 H0Y9J4 135 aa11.28□□□□□ -0.6
TRAPPC11-202ENST00000357207 CEP350Q5VT06 3117 aa11.28□□□□□ -0.6
TRAPPC11-202ENST00000357207 PTPRBP23467 1997 aa11.28□□□□□ -0.6
TRAPPC11-202ENST00000357207 MIFP14174 115 aa11.27□□□□□ -0.6
TRAPPC11-202ENST00000357207 KIF25-AS1Q9Y6Z4 181 aa11.27□□□□□ -0.6
TRAPPC11-202ENST00000357207 IGKV2-24A0A0C4DH68 120 aa11.27□□□□□ -0.6
TRAPPC11-202ENST00000357207 LINC01546A6NGU7 62 aa11.27□□□□□ -0.61
TRAPPC11-202ENST00000357207 M0QXV9 152 aa11.27□□□□□ -0.61
TRAPPC11-202ENST00000357207 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 COX17Q14061 63 aa11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 NTM-AS1Q6ZSK4 140 aa11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 FAM19A3Q7Z5A8 133 aa11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 RAI1Q7Z5J4 1906 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 A0A1W2PPR1 153 aa11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 C3orf84H3BNL1 204 aa11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 CSDC2Q9Y534 153 aaKnown RBP11.26□□□□□ -0.61
TRAPPC11-202ENST00000357207 A0A087WVE0 104 aa11.25□□□□□ -0.61
TRAPPC11-202ENST00000357207 C11orf45Q8TAV5 145 aa11.25□□□□□ -0.61
TRAPPC11-202ENST00000357207 ZNF462Q96JM2 2506 aa11.25□□□□□ -0.61
TRAPPC11-202ENST00000357207 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
TRAPPC11-202ENST00000357207 A0A087WZ39 114 aa11.24□□□□□ -0.61
TRAPPC11-202ENST00000357207 ATP5EP56381 51 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC11-202ENST00000357207 M0R378 163 aa11.23□□□□□ -0.61
TRAPPC11-202ENST00000357207 MUC7Q8TAX7 377 aa11.23□□□□□ -0.61
TRAPPC11-202ENST00000357207 SMCPP49901 116 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC11-202ENST00000357207 LELP1Q5T871 98 aa11.22□□□□□ -0.61
TRAPPC11-202ENST00000357207 ZNF73O43830 326 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC11-202ENST00000357207 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC11-202ENST00000357207 DEFB131BA0A096LNP1 70 aa11.22□□□□□ -0.61
TRAPPC11-202ENST00000357207 A0A087WYN8 130 aa11.21□□□□□ -0.61
TRAPPC11-202ENST00000357207 IGLV4-60A0A075B6I1 120 aa11.21□□□□□ -0.61
TRAPPC11-202ENST00000357207 BEAN1Q3B7T3 259 aa11.21□□□□□ -0.61
TRAPPC11-202ENST00000357207 PRO0461Q9UI25 63 aa11.21□□□□□ -0.61
TRAPPC11-202ENST00000357207 A0A096LNI7 61 aa11.21□□□□□ -0.62
TRAPPC11-202ENST00000357207 CYSRT1A8MQ03 144 aa11.21□□□□□ -0.62
TRAPPC11-202ENST00000357207 Q6ZSN1 163 aa11.21□□□□□ -0.62
TRAPPC11-202ENST00000357207 Q8N814 137 aa11.21□□□□□ -0.62
TRAPPC11-202ENST00000357207 IGKV2-28A0A075B6P5 120 aa11.21□□□□□ -0.62
TRAPPC11-202ENST00000357207 A0A0U1RQV1 116 aa11.21□□□□□ -0.62
TRAPPC11-202ENST00000357207 IGKV2D-28P01615 120 aa11.21□□□□□ -0.62
TRAPPC11-202ENST00000357207 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
TRAPPC11-202ENST00000357207 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
TRAPPC11-202ENST00000357207 POLQO75417 2590 aa11.19□□□□□ -0.62
TRAPPC11-202ENST00000357207 TRAV7A0A075B6U4 112 aa11.19□□□□□ -0.62
TRAPPC11-202ENST00000357207 LINC00315P59091 139 aa11.19□□□□□ -0.62
TRAPPC11-202ENST00000357207 B9D2Q9BPU9 175 aa11.19□□□□□ -0.62
TRAPPC11-202ENST00000357207 PRR3P79522 188 aaKnown RBP11.18□□□□□ -0.62
TRAPPC11-202ENST00000357207 KLK5Q9Y337 293 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC11-202ENST00000357207 SMIM26A0A096LP01 95 aa11.17□□□□□ -0.62
TRAPPC11-202ENST00000357207 C9orf116Q5BN46 136 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC11-202ENST00000357207 SPTSSBQ8NFR3 76 aa11.17□□□□□ -0.62
TRAPPC11-202ENST00000357207 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC11-202ENST00000357207 KIR2DL5BQ8NHK3 375 aa11.15□□□□□ -0.62
TRAPPC11-202ENST00000357207 DHRS4-AS1Q9P1J3 65 aa11.15□□□□□ -0.62
TRAPPC11-202ENST00000357207 TRBV7-7A0A0K0K1E9 115 aa11.15□□□□□ -0.62
TRAPPC11-202ENST00000357207 IGKV4-1P06312 121 aa11.15□□□□□ -0.62
TRAPPC11-202ENST00000357207 KPRPQ5T749 579 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC11-202ENST00000357207 HRCT1Q6UXD1 115 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms