RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SMG1Q96Q15 3661 aaKnown RBP10.42□□□□□ -0.74
SREBF1-202ENST00000355815 ZNF561-AS1K7EIQ3 104 aa10.42□□□□□ -0.74
SREBF1-202ENST00000355815 GPHB5Q86YW7 130 aa10.42□□□□□ -0.74
SREBF1-202ENST00000355815 USP24Q9UPU5 2620 aa10.42□□□□□ -0.74
SREBF1-202ENST00000355815 TRBV30A0A0K0K1B3 111 aa10.41□□□□□ -0.74
SREBF1-202ENST00000355815 SNURFQ9Y675 71 aa10.41□□□□□ -0.74
SREBF1-202ENST00000355815 LINC00467Q9BRT7 94 aa10.41□□□□□ -0.74
SREBF1-202ENST00000355815 TSPEAR-AS2P59090 65 aa10.41□□□□□ -0.74
SREBF1-202ENST00000355815 LINC00308Q8TCZ7 52 aa10.41□□□□□ -0.74
SREBF1-202ENST00000355815 USP17L23D6RBM5 183 aa10.4□□□□□ -0.74
SREBF1-202ENST00000355815 UBE2D1P51668 147 aa10.4□□□□□ -0.74
SREBF1-202ENST00000355815 DEFB113Q30KQ7 82 aa10.4□□□□□ -0.75
SREBF1-202ENST00000355815 UPK3BQ9BT76 320 aa10.4□□□□□ -0.75
SREBF1-202ENST00000355815 TIRAPP58753 221 aa10.39□□□□□ -0.75
SREBF1-202ENST00000355815 FAM19A5Q7Z5A7 132 aaPredicted RBP10.39□□□□□ -0.75
SREBF1-202ENST00000355815 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
SREBF1-202ENST00000355815 F8WEM9 126 aa10.38□□□□□ -0.75
SREBF1-202ENST00000355815 CCL24O00175 119 aa10.38□□□□□ -0.75
SREBF1-202ENST00000355815 FAM236DA0A1B0GTK5 79 aa10.37□□□□□ -0.75
SREBF1-202ENST00000355815 K7EMT4 169 aa10.37□□□□□ -0.75
SREBF1-202ENST00000355815 LST1O00453 97 aa10.37□□□□□ -0.75
SREBF1-202ENST00000355815 FAM236CP0DP71 79 aa10.37□□□□□ -0.75
SREBF1-202ENST00000355815 COX7CP15954 63 aa10.37□□□□□ -0.75
SREBF1-202ENST00000355815 TMEM263Q8WUH6 116 aaKnown RBP10.37□□□□□ -0.75
SREBF1-202ENST00000355815 IGSF10Q6WRI0 2623 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 ZANQ9Y493 2812 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 K7EQG2 157 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 M0QY20 66 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 CRYBG3Q68DQ2 2970 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 UBE2D3P61077 147 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 UBE2D2P62837 147 aa10.36□□□□□ -0.75
SREBF1-202ENST00000355815 SMCPP49901 116 aaPredicted RBP10.35□□□□□ -0.75
SREBF1-202ENST00000355815 NREPQ16612 68 aa10.35□□□□□ -0.75
SREBF1-202ENST00000355815 COL27A1Q8IZC6 1860 aaPredicted RBP10.35□□□□□ -0.75
SREBF1-202ENST00000355815 NKAPP1Q8N9T2 125 aa10.34□□□□□ -0.75
SREBF1-202ENST00000355815 V9GYY9 64 aa10.34□□□□□ -0.75
SREBF1-202ENST00000355815 JMJD7-PLA2G4BH0Y9G9 81 aa10.34□□□□□ -0.75
SREBF1-202ENST00000355815 NDUFC2O95298 119 aa10.34□□□□□ -0.75
SREBF1-202ENST00000355815 SERP2Q8N6R1 65 aa10.34□□□□□ -0.75
SREBF1-202ENST00000355815 DCANP1Q8TF63 244 aa10.34□□□□□ -0.75
SREBF1-202ENST00000355815 MED14OSP0DP75 135 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 GYPEP15421 78 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 RPL18AQ02543 176 aaKnown RBP10.33□□□□□ -0.76
SREBF1-202ENST00000355815 DEFB121Q5J5C9 76 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 K7EQD1 137 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 DEFB4AO15263 64 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 IGHV4-31P0DP07 118 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 PRR4Q16378 134 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 TEX15Q9BXT5 2789 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
SREBF1-202ENST00000355815 WFDC10AQ9H1F0 79 aa10.32□□□□□ -0.76
SREBF1-202ENST00000355815 POLR2KP53803 58 aaKnown RBP10.32□□□□□ -0.76
SREBF1-202ENST00000355815 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
SREBF1-202ENST00000355815 HELZ2Q9BYK8 2649 aaKnown RBP10.32□□□□□ -0.76
SREBF1-202ENST00000355815 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
SREBF1-202ENST00000355815 ATRQ13535 2644 aa10.31□□□□□ -0.76
SREBF1-202ENST00000355815 Q6ZTI0 123 aa10.31□□□□□ -0.76
SREBF1-202ENST00000355815 CSMD1Q96PZ7 3565 aa10.31□□□□□ -0.76
SREBF1-202ENST00000355815 DCHS2Q6V1P9 2916 aa10.3□□□□□ -0.76
SREBF1-202ENST00000355815 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
SREBF1-202ENST00000355815 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
SREBF1-202ENST00000355815 TSHBP01222 138 aa10.3□□□□□ -0.76
SREBF1-202ENST00000355815 BBC3Q96PG8 261 aaPredicted RBP10.3□□□□□ -0.76
SREBF1-202ENST00000355815 MAP6D1Q9H9H5 199 aa10.3□□□□□ -0.76
SREBF1-202ENST00000355815 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
SREBF1-202ENST00000355815 TMEM256-PLSCR3K7ERE1 68 aa10.29□□□□□ -0.76
SREBF1-202ENST00000355815 Q6YL49 198 aa10.29□□□□□ -0.76
SREBF1-202ENST00000355815 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
SREBF1-202ENST00000355815 KLLNB2CW77 178 aa10.28□□□□□ -0.76
SREBF1-202ENST00000355815 CRYGDP07320 174 aa10.28□□□□□ -0.76
SREBF1-202ENST00000355815 CXCL5P42830 114 aa10.28□□□□□ -0.76
SREBF1-202ENST00000355815 SOSTDC1Q6X4U4 206 aa10.27□□□□□ -0.76
SREBF1-202ENST00000355815 ZNF702PQ9H963 129 aa10.27□□□□□ -0.76
SREBF1-202ENST00000355815 DNAJC9-AS1A6NH13 148 aa10.27□□□□□ -0.77
SREBF1-202ENST00000355815 LINC00526Q96FQ7 95 aa10.27□□□□□ -0.77
SREBF1-202ENST00000355815 IMUPQ9GZP8 106 aa10.27□□□□□ -0.77
SREBF1-202ENST00000355815 UTP20O75691 2785 aaKnown RBP10.27□□□□□ -0.77
SREBF1-202ENST00000355815 PRO0461Q9UI25 63 aa10.27□□□□□ -0.77
SREBF1-202ENST00000355815 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
SREBF1-202ENST00000355815 ZNF843Q8N446 348 aa10.26□□□□□ -0.77
SREBF1-202ENST00000355815 C6orf99Q4VX62 202 aa10.26□□□□□ -0.77
SREBF1-202ENST00000355815 Q6Q795 121 aa10.26□□□□□ -0.77
SREBF1-202ENST00000355815 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
SREBF1-202ENST00000355815 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
SREBF1-202ENST00000355815 Q9UF83 564 aa10.25□□□□□ -0.77
SREBF1-202ENST00000355815 SVEP1Q4LDE5 3571 aa10.25□□□□□ -0.77
SREBF1-202ENST00000355815 NDUFA1O15239 70 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 BRI3O95415 125 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 FUSP35637 526 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■■■□ 20.2
SREBF1-202ENST00000355815 COX8CQ7Z4L0 72 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 CAMK2N2Q96S95 79 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 XAGE1AQ9HD64 81 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 TIMM17BO60830 172 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 LRRC75A-AS1Q8N1F1 130 aa10.24□□□□□ -0.77
SREBF1-202ENST00000355815 ODF3Q96PU9 254 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms