RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 HCG22E2RYF7 251 aa6.39□□□□□ -1.39
RBFOX1-203ENST00000355637 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.39□□□□□ -1.39
RBFOX1-203ENST00000355637 KLK9Q9UKQ9 250 aa6.39□□□□□ -1.39
RBFOX1-203ENST00000355637 IGHV1-3A0A0C4DH29 117 aa6.39□□□□□ -1.39
RBFOX1-203ENST00000355637 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
RBFOX1-203ENST00000355637 HIGD2AQ9BW72 106 aa6.39□□□□□ -1.39
RBFOX1-203ENST00000355637 NOTCH3Q9UM47 2321 aa6.39□□□□□ -1.39
RBFOX1-203ENST00000355637 LINC01560Q8TB33 94 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 OVOL2Q9BRP0 275 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 I3L2K1 104 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 IGHV1-69P01742 117 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 TRBV7-4A0A0J9YYF1 115 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 TRBV10-1A0A0K0K1A3 114 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 LYRM9A8MSI8 78 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 CUL9Q8IWT3 2517 aa6.38□□□□□ -1.39
RBFOX1-203ENST00000355637 TRBV10-3A0A0K0K1G6 114 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 LY6HO94772 140 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 Q1T7F1 81 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 CCDC140Q96MF4 163 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 IGHV4-4A0A075B6R2 117 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 SMIM11BQ8TCY0 68 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 ITLN2Q8WWU7 325 aaPredicted RBP6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 AKAP13Q12802 2813 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 GNLYP22749 145 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 Q6ZTC4 211 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 LCA10Q71F78 164 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 CDKN2A-AS1Q9UH64 79 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 SMAD5-AS1Q9Y6J3 95 aa6.37□□□□□ -1.39
RBFOX1-203ENST00000355637 CEP295Q9C0D2 2601 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 A6NED7 52 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 BPY2O14599 106 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 PRR9Q5T870 116 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 ZFAND3Q9H8U3 227 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 CLPSL1A2RUU4 121 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 K7EIM0 57 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 UBE2AP49459 152 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 DEFB1P60022 68 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 ATMQ13315 3056 aa6.36□□□□□ -1.39
RBFOX1-203ENST00000355637 MRGPRG-AS1Q2M3A8 158 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 KAAG1Q9UBP8 84 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 KALRNO60229 2985 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 TLN1Q9Y490 2541 aaKnown RBP6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 BCE1O60756 84 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 IGKV3-7A0A075B6H7 116 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 JMJD7-PLA2G4BH0Y9G9 81 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 CD164L2Q6UWJ8 174 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 C7orf65Q6ZTY9 151 aa6.35□□□□□ -1.39
RBFOX1-203ENST00000355637 IGLV1-47P01700 117 aa6.34□□□□□ -1.39
RBFOX1-203ENST00000355637 CTSGP08311 255 aa6.34□□□□□ -1.39
RBFOX1-203ENST00000355637 H0YGX0 51 aa6.34□□□□□ -1.39
RBFOX1-203ENST00000355637 LINC00337Q8N6G1 96 aa6.34□□□□□ -1.39
RBFOX1-203ENST00000355637 TACC2O95359 2948 aa6.34□□□□□ -1.4
RBFOX1-203ENST00000355637 ANKHD1Q8IWZ3 2542 aaKnown RBP6.34□□□□□ -1.4
RBFOX1-203ENST00000355637 SPATA3Q8NHX4 192 aa6.33□□□□□ -1.4
RBFOX1-203ENST00000355637 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
RBFOX1-203ENST00000355637 ZNF843Q8N446 348 aa6.33□□□□□ -1.4
RBFOX1-203ENST00000355637 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
RBFOX1-203ENST00000355637 DPM3Q9P2X0 92 aa6.33□□□□□ -1.4
RBFOX1-203ENST00000355637 CREBBPQ92793 2442 aa6.33□□□□□ -1.4
RBFOX1-203ENST00000355637 NDUFA1O15239 70 aa6.32□□□□□ -1.4
RBFOX1-203ENST00000355637 Q8N9L7 120 aa6.32□□□□□ -1.4
RBFOX1-203ENST00000355637 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
RBFOX1-203ENST00000355637 KIF25-AS1Q9Y6Z4 181 aa6.32□□□□□ -1.4
RBFOX1-203ENST00000355637 IGHV3-73A0A0B4J1V6 119 aa6.32□□□□□ -1.4
RBFOX1-203ENST00000355637 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
RBFOX1-203ENST00000355637 ZNF292O60281 2723 aa6.32□□□□□ -1.4
RBFOX1-203ENST00000355637 IGHV3-38A0A0C4DH36 116 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 DIRC1Q969H9 104 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 TOMM7Q9P0U1 55 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 IGHV4OR15-8A0A075B7B6 117 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 A0A087WW49 117 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 LINC00158P58513 81 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 MUC6Q6W4X9 2439 aa6.31□□□□□ -1.4
RBFOX1-203ENST00000355637 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.3□□□□□ -1.4
RBFOX1-203ENST00000355637 C19orf84I3L1E1 186 aa6.3□□□□□ -1.4
RBFOX1-203ENST00000355637 M0R2N4 97 aa6.3□□□□□ -1.4
RBFOX1-203ENST00000355637 Q5VV11 94 aa6.3□□□□□ -1.4
RBFOX1-203ENST00000355637 PHF5AQ7RTV0 110 aaKnown RBP6.3□□□□□ -1.4
RBFOX1-203ENST00000355637 CELA1Q9UNI1 258 aa6.3□□□□□ -1.4
RBFOX1-203ENST00000355637 RNASE3P12724 160 aaKnown RBP6.29□□□□□ -1.4
RBFOX1-203ENST00000355637 RNF5Q99942 180 aa6.29□□□□□ -1.4
RBFOX1-203ENST00000355637 ZZEF1O43149 2961 aa6.29□□□□□ -1.4
RBFOX1-203ENST00000355637 LINC00315P59091 139 aa6.28□□□□□ -1.4
RBFOX1-203ENST00000355637 LRBAP50851 2863 aa6.28□□□□□ -1.4
RBFOX1-203ENST00000355637 ATRXP46100 2492 aa6.27□□□□□ -1.41
RBFOX1-203ENST00000355637 A6NN06 94 aa6.27□□□□□ -1.41
RBFOX1-203ENST00000355637 HTN1P15515 57 aa6.27□□□□□ -1.41
RBFOX1-203ENST00000355637 COX7B2Q8TF08 81 aa6.27□□□□□ -1.41
RBFOX1-203ENST00000355637 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
RBFOX1-203ENST00000355637 ZNF706Q9Y5V0 76 aaPredicted RBP6.27□□□□□ -1.41
RBFOX1-203ENST00000355637 IGF2RP11717 2491 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms