RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 RAB37Q96AX2 223 aa17.76■□□□□ 0.43
CLK2-201ENST00000355560 SMIM1B2RUZ4 78 aa17.75■□□□□ 0.43
CLK2-201ENST00000355560 K7ERJ3 54 aa17.75■□□□□ 0.43
CLK2-201ENST00000355560 Q6ZTC4 211 aa17.75■□□□□ 0.43
CLK2-201ENST00000355560 ZFAND6Q6FIF0 208 aa17.75■□□□□ 0.43
CLK2-201ENST00000355560 IGLV5-39A0A0G2JS06 123 aa17.74■□□□□ 0.43
CLK2-201ENST00000355560 A0A0J9YXY3 114 aa17.74■□□□□ 0.43
CLK2-201ENST00000355560 SMIM13P0DJ93 91 aa17.74■□□□□ 0.43
CLK2-201ENST00000355560 SH2D6Q7Z4S9 175 aa17.74■□□□□ 0.43
CLK2-201ENST00000355560 K7EIL1 84 aa17.74■□□□□ 0.43
CLK2-201ENST00000355560 MGAM2Q2M2H8 2515 aa17.72■□□□□ 0.43
CLK2-201ENST00000355560 C9orf118A6NHY6 69 aa17.7■□□□□ 0.42
CLK2-201ENST00000355560 TMEM238C9JI98 176 aa17.7■□□□□ 0.42
CLK2-201ENST00000355560 IGHV3-30P01768 117 aa17.7■□□□□ 0.42
CLK2-201ENST00000355560 IGHV3-30-5P0DP03 117 aa17.7■□□□□ 0.42
CLK2-201ENST00000355560 LINC00959A0A1B0GUT2 108 aa17.69■□□□□ 0.42
CLK2-201ENST00000355560 DEFB121Q5J5C9 76 aa17.69■□□□□ 0.42
CLK2-201ENST00000355560 SPATA25Q9BR10 227 aa17.69■□□□□ 0.42
CLK2-201ENST00000355560 VAMP3Q15836 100 aa17.69■□□□□ 0.42
CLK2-201ENST00000355560 KPRPQ5T749 579 aaPredicted RBP17.69■□□□□ 0.42
CLK2-201ENST00000355560 TMEM238LA0A1B0GVL6 79 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 A6NJY4 79 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 LELP1Q5T871 98 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 CLPSL2Q6UWE3 100 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 NAA38Q9BRA0 125 aaKnown RBP17.68■□□□□ 0.42
CLK2-201ENST00000355560 H3BUT2 72 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 NANOS2P60321 138 aaKnown RBP17.68■□□□□ 0.42
CLK2-201ENST00000355560 Q8N3U1 123 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 C11orf45Q8TAV5 145 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 MRAPQ8TCY5 172 aa17.68■□□□□ 0.42
CLK2-201ENST00000355560 NDUFA1O15239 70 aa17.67■□□□□ 0.42
CLK2-201ENST00000355560 IGHV3OR16-9A0A0B4J2B5 98 aa17.66■□□□□ 0.42
CLK2-201ENST00000355560 H3BNG1 76 aa17.66■□□□□ 0.42
CLK2-201ENST00000355560 TM2D3Q9BRN9 247 aa17.66■□□□□ 0.42
CLK2-201ENST00000355560 A0A1B0GWB2 263 aa17.65■□□□□ 0.42
CLK2-201ENST00000355560 LITAFQ99732 161 aa17.65■□□□□ 0.42
CLK2-201ENST00000355560 Q9H8V8 135 aa17.65■□□□□ 0.42
CLK2-201ENST00000355560 LINC00269Q8N2A0 174 aa17.64■□□□□ 0.41
CLK2-201ENST00000355560 ANGP03950 147 aaKnown RBP17.63■□□□□ 0.41
CLK2-201ENST00000355560 SS18Q15532 418 aa17.63■□□□□ 0.41
CLK2-201ENST00000355560 LYPD5Q6UWN5 251 aa17.63■□□□□ 0.41
CLK2-201ENST00000355560 CCL25O15444 150 aa17.62■□□□□ 0.41
CLK2-201ENST00000355560 XCL1P47992 114 aa17.62■□□□□ 0.41
CLK2-201ENST00000355560 A0A087WZ39 114 aa17.61■□□□□ 0.41
CLK2-201ENST00000355560 DEFB131BA0A096LNP1 70 aa17.6■□□□□ 0.41
CLK2-201ENST00000355560 UBE2V1Q13404 147 aa17.6■□□□□ 0.41
CLK2-201ENST00000355560 ADAMTSL4-AS1Q5T5F5 129 aa17.6■□□□□ 0.41
CLK2-201ENST00000355560 C5orf38Q86SI9 138 aa17.6■□□□□ 0.41
CLK2-201ENST00000355560 MUSTN1Q8IVN3 82 aa17.59■□□□□ 0.41
CLK2-201ENST00000355560 REG3AQ06141 175 aa17.59■□□□□ 0.41
CLK2-201ENST00000355560 ZNF625Q96I27 306 aaPredicted RBP17.59■□□□□ 0.41
CLK2-201ENST00000355560 APOMO95445 188 aa17.58■□□□□ 0.4
CLK2-201ENST00000355560 SPANXDQ9BXN6 97 aa17.58■□□□□ 0.4
CLK2-201ENST00000355560 SPANXCQ9NY87 97 aa17.58■□□□□ 0.4
CLK2-201ENST00000355560 A0A1W2PPM0 123 aa17.57■□□□□ 0.4
CLK2-201ENST00000355560 COX7B2Q8TF08 81 aa17.57■□□□□ 0.4
CLK2-201ENST00000355560 TOMM7Q9P0U1 55 aa17.57■□□□□ 0.4
CLK2-201ENST00000355560 TIMM17BO60830 172 aa17.57■□□□□ 0.4
CLK2-201ENST00000355560 RPL24P83731 157 aaKnown RBP17.57■□□□□ 0.4
CLK2-201ENST00000355560 A4D1N5 150 aa17.56■□□□□ 0.4
CLK2-201ENST00000355560 IGLL5B9A064 214 aa17.56■□□□□ 0.4
CLK2-201ENST00000355560 PRSS2P07478 247 aa17.56■□□□□ 0.4
CLK2-201ENST00000355560 MIAQ16674 131 aa17.56■□□□□ 0.4
CLK2-201ENST00000355560 CIRBPQ14011 172 aaKnown RBP17.54■□□□□ 0.4
CLK2-201ENST00000355560 CFC1BP0CG36 223 aa17.54■□□□□ 0.4
CLK2-201ENST00000355560 CFC1P0CG37 223 aa17.54■□□□□ 0.4
CLK2-201ENST00000355560 IGLV10-54A0A075B6I4 117 aa17.53■□□□□ 0.4
CLK2-201ENST00000355560 DAND5Q8N907 189 aa17.53■□□□□ 0.4
CLK2-201ENST00000355560 FABP2P12104 132 aa17.53■□□□□ 0.4
CLK2-201ENST00000355560 HERV-K104P63124 156 aa17.53■□□□□ 0.4
CLK2-201ENST00000355560 CHCHD10Q8WYQ3 142 aaPredicted RBP17.53■□□□□ 0.4
CLK2-201ENST00000355560 NPC2P61916 151 aa17.52■□□□□ 0.4
CLK2-201ENST00000355560 PGPEP1Q9NXJ5 209 aa17.52■□□□□ 0.4
CLK2-201ENST00000355560 MEIG1Q5JSS6 88 aa17.51■□□□□ 0.39
CLK2-201ENST00000355560 GAGE10A6NGK3 116 aa17.51■□□□□ 0.39
CLK2-201ENST00000355560 CD164L2Q6UWJ8 174 aa17.51■□□□□ 0.39
CLK2-201ENST00000355560 KLK12Q9UKR0 248 aa17.51■□□□□ 0.39
CLK2-201ENST00000355560 HUWE1Q7Z6Z7 4374 aaKnown RBP17.5■□□□□ 0.39
CLK2-201ENST00000355560 WFDC10BQ8IUB3 73 aa17.5■□□□□ 0.39
CLK2-201ENST00000355560 A0A0U1RRA0 63 aa17.5■□□□□ 0.39
CLK2-201ENST00000355560 IGHV3-33P01772 117 aa17.49■□□□□ 0.39
CLK2-201ENST00000355560 SPCS1Q9Y6A9 102 aa17.49■□□□□ 0.39
CLK2-201ENST00000355560 K7EP34 96 aa17.48■□□□□ 0.39
CLK2-201ENST00000355560 GTF2H5Q6ZYL4 71 aa17.48■□□□□ 0.39
CLK2-201ENST00000355560 TRAV10A0A0B4J240 114 aa17.48■□□□□ 0.39
CLK2-201ENST00000355560 ESRGQ1W209 222 aa17.48■□□□□ 0.39
CLK2-201ENST00000355560 PRR34Q9NV39 138 aa17.48■□□□□ 0.39
CLK2-201ENST00000355560 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.47■□□□□ 0.39
CLK2-201ENST00000355560 EIF4EBP3O60516 100 aaPredicted RBP17.47■□□□□ 0.39
CLK2-201ENST00000355560 COX7A2LO14548 114 aa17.46■□□□□ 0.39
CLK2-201ENST00000355560 TSPAN13O95857 204 aa17.46■□□□□ 0.39
CLK2-201ENST00000355560 IFITM1P13164 125 aa17.46■□□□□ 0.39
CLK2-201ENST00000355560 LINC01561Q8N1V8 128 aa17.46■□□□□ 0.39
CLK2-201ENST00000355560 PRO1854Q9UHT4 67 aa17.46■□□□□ 0.39
CLK2-201ENST00000355560 A0A0B4J2C4 111 aa17.45■□□□□ 0.38
CLK2-201ENST00000355560 C6orf226Q5I0X4 101 aa17.43■□□□□ 0.38
CLK2-201ENST00000355560 ENHOQ6UWT2 76 aa17.43■□□□□ 0.38
CLK2-201ENST00000355560 FOXI1Q12951 378 aa17.42■□□□□ 0.38
CLK2-201ENST00000355560 Q8IZM0 81 aa17.42■□□□□ 0.38
CLK2-201ENST00000355560 LINC00308Q8TCZ7 52 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms