RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 TRBV30A0A0K0K1B3 111 aa8.6□□□□□ -1.03
NUDCD3-202ENST00000355451 TLN2Q9Y4G6 2542 aa8.6□□□□□ -1.03
NUDCD3-202ENST00000355451 ZNF726P1Q15940 193 aa8.6□□□□□ -1.03
NUDCD3-202ENST00000355451 SPRNQ5BIV9 151 aa8.59□□□□□ -1.03
NUDCD3-202ENST00000355451 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
NUDCD3-202ENST00000355451 CENPFP49454 3210 aa8.59□□□□□ -1.03
NUDCD3-202ENST00000355451 FRMD6-AS1P0C7T7 363 aa8.59□□□□□ -1.03
NUDCD3-202ENST00000355451 TNFRSF13BO14836 293 aaPredicted RBP8.58□□□□□ -1.04
NUDCD3-202ENST00000355451 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
NUDCD3-202ENST00000355451 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
NUDCD3-202ENST00000355451 EBI3Q14213 229 aa8.58□□□□□ -1.04
NUDCD3-202ENST00000355451 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
NUDCD3-202ENST00000355451 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 IMUPQ9GZP8 106 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 NEXN-AS1Q8NBZ9 246 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 C20orf173Q96LM9 149 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 WDR87Q6ZQQ6 2873 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 PLA2G2EQ9NZK7 142 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 CRYGAP11844 174 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 PTH2Q96A98 100 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 EDN2P20800 178 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 COX17Q14061 63 aa8.57□□□□□ -1.04
NUDCD3-202ENST00000355451 TRBV6-4A0A1B0GX49 114 aa8.56□□□□□ -1.04
NUDCD3-202ENST00000355451 ODF3BA8MYP8 253 aa8.56□□□□□ -1.04
NUDCD3-202ENST00000355451 TLN1Q9Y490 2541 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-202ENST00000355451 Q9BRP9 147 aa8.56□□□□□ -1.04
NUDCD3-202ENST00000355451 PCNTO95613 3336 aa8.56□□□□□ -1.04
NUDCD3-202ENST00000355451 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
NUDCD3-202ENST00000355451 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
NUDCD3-202ENST00000355451 PRORYQ9H606 182 aa8.55□□□□□ -1.04
NUDCD3-202ENST00000355451 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
NUDCD3-202ENST00000355451 RBX1P62877 108 aa8.55□□□□□ -1.04
NUDCD3-202ENST00000355451 ALPK3Q96L96 1907 aa8.55□□□□□ -1.04
NUDCD3-202ENST00000355451 IGLV3-1P01715 115 aa8.55□□□□□ -1.04
NUDCD3-202ENST00000355451 PTPRBP23467 1997 aa8.55□□□□□ -1.04
NUDCD3-202ENST00000355451 SPAG11AQ6PDA7 123 aa8.54□□□□□ -1.04
NUDCD3-202ENST00000355451 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
NUDCD3-202ENST00000355451 H0Y9P7 68 aa8.54□□□□□ -1.04
NUDCD3-202ENST00000355451 ODF3Q96PU9 254 aa8.54□□□□□ -1.04
NUDCD3-202ENST00000355451 ADCYAP1P18509 176 aa8.54□□□□□ -1.04
NUDCD3-202ENST00000355451 LINC00173Q6ZV60 143 aa8.54□□□□□ -1.04
NUDCD3-202ENST00000355451 Q6ZSV7 163 aa8.54□□□□□ -1.04
NUDCD3-202ENST00000355451 TTTY13Q9BZ97 58 aa8.53□□□□□ -1.04
NUDCD3-202ENST00000355451 ANKHD1Q8IWZ3 2542 aaKnown RBP8.53□□□□□ -1.04
NUDCD3-202ENST00000355451 COL5A1P20908 1838 aaPredicted RBP8.53□□□□□ -1.04
NUDCD3-202ENST00000355451 Q8N7P7 452 aa8.53□□□□□ -1.04
NUDCD3-202ENST00000355451 PROK2Q9HC23 129 aa8.52□□□□□ -1.04
NUDCD3-202ENST00000355451 COL4A6Q14031 1691 aa8.52□□□□□ -1.05
NUDCD3-202ENST00000355451 PSPHP1O15172 72 aa8.52□□□□□ -1.05
NUDCD3-202ENST00000355451 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-202ENST00000355451 CCDC140Q96MF4 163 aa8.52□□□□□ -1.05
NUDCD3-202ENST00000355451 LINC00575Q6W349 94 aa8.52□□□□□ -1.05
NUDCD3-202ENST00000355451 ZNF702PQ9H963 129 aa8.52□□□□□ -1.05
NUDCD3-202ENST00000355451 Q6JHZ5 121 aa8.51□□□□□ -1.05
NUDCD3-202ENST00000355451 A0A1B0GU69 56 aa8.51□□□□□ -1.05
NUDCD3-202ENST00000355451 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
NUDCD3-202ENST00000355451 BRI3O95415 125 aa8.5□□□□□ -1.05
NUDCD3-202ENST00000355451 NHLRC4P0CG21 123 aaPredicted RBP8.5□□□□□ -1.05
NUDCD3-202ENST00000355451 LTBP1Q14766 1721 aa8.5□□□□□ -1.05
NUDCD3-202ENST00000355451 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
NUDCD3-202ENST00000355451 HCG22E2RYF7 251 aa8.5□□□□□ -1.05
NUDCD3-202ENST00000355451 U3KQA8 63 aa8.49□□□□□ -1.05
NUDCD3-202ENST00000355451 C1orf229Q6ZS94 237 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-202ENST00000355451 SOSTDC1Q6X4U4 206 aa8.49□□□□□ -1.05
NUDCD3-202ENST00000355451 ATP11AUNQ6ZP68 121 aa8.49□□□□□ -1.05
NUDCD3-202ENST00000355451 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
NUDCD3-202ENST00000355451 COA6Q5JTJ3 125 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-202ENST00000355451 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
NUDCD3-202ENST00000355451 CYSRT1A8MQ03 144 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 CRIP2P52943 208 aaPredicted RBP8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 K7EQG2 157 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 ZNF524Q96C55 264 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 IGLV4-3A0A075B6K6 122 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 LINC00959A0A1B0GUT2 108 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 MRGPRG-AS1Q2M3A8 158 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 PROK1P58294 105 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 COX6A2Q02221 97 aa8.48□□□□□ -1.05
NUDCD3-202ENST00000355451 VPREB1P12018 145 aa8.47□□□□□ -1.05
NUDCD3-202ENST00000355451 TRIAP1O43715 76 aa8.47□□□□□ -1.05
NUDCD3-202ENST00000355451 LINC01006Q8NI28 216 aa8.46□□□□□ -1.05
NUDCD3-202ENST00000355451 IGLV8-61A0A075B6I0 122 aa8.46□□□□□ -1.06
NUDCD3-202ENST00000355451 P0C879 139 aa8.46□□□□□ -1.06
NUDCD3-202ENST00000355451 RNASE8Q8TDE3 154 aaKnown RBP8.45□□□□□ -1.06
NUDCD3-202ENST00000355451 SMR3AQ99954 134 aa8.45□□□□□ -1.06
NUDCD3-202ENST00000355451 C19orf84I3L1E1 186 aa8.45□□□□□ -1.06
NUDCD3-202ENST00000355451 Q8NA96 180 aa8.45□□□□□ -1.06
NUDCD3-202ENST00000355451 GDF5OSQ5U4N7 250 aa8.44□□□□□ -1.06
NUDCD3-202ENST00000355451 MRPS36P82909 103 aaKnown RBP8.44□□□□□ -1.06
NUDCD3-202ENST00000355451 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
NUDCD3-202ENST00000355451 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
NUDCD3-202ENST00000355451 IGFL2Q6UWQ7 119 aa8.44□□□□□ -1.06
NUDCD3-202ENST00000355451 TRBV7-7A0A0K0K1E9 115 aa8.44□□□□□ -1.06
NUDCD3-202ENST00000355451 A0A087WSZ3 146 aa8.43□□□□□ -1.06
NUDCD3-202ENST00000355451 DNAH12Q6ZR08 3092 aa8.43□□□□□ -1.06
NUDCD3-202ENST00000355451 NDUFA7O95182 113 aa8.43□□□□□ -1.06
NUDCD3-202ENST00000355451 ADAMTS20P59510 1910 aa8.43□□□□□ -1.06
NUDCD3-202ENST00000355451 NRACQ8N912 160 aa8.42□□□□□ -1.06
NUDCD3-202ENST00000355451 SSBP3-AS1Q7Z2R9 100 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 327.1 ms