RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 LEPROTO15243 131 aa9.9□□□□□ -0.82
EBF3-201ENST00000355311 FSHBP01225 129 aa9.9□□□□□ -0.82
EBF3-201ENST00000355311 INSP01308 110 aa9.9□□□□□ -0.82
EBF3-201ENST00000355311 C11orf68Q9H3H3 251 aaKnown RBP9.9□□□□□ -0.82
EBF3-201ENST00000355311 TRGV2A0A075B6R0 118 aa9.9□□□□□ -0.83
EBF3-201ENST00000355311 RPL13AP40429 203 aaKnown RBP9.9□□□□□ -0.83
EBF3-201ENST00000355311 RHOHQ15669 191 aa9.9□□□□□ -0.83
EBF3-201ENST00000355311 C4orf3Q8WVX3 66 aa9.9□□□□□ -0.83
EBF3-201ENST00000355311 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.83
EBF3-201ENST00000355311 DEFB130BP0DP73 79 aa9.89□□□□□ -0.83
EBF3-201ENST00000355311 DEFB130AP0DP74 79 aa9.89□□□□□ -0.83
EBF3-201ENST00000355311 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
EBF3-201ENST00000355311 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
EBF3-201ENST00000355311 Q6Q795 121 aa9.89□□□□□ -0.83
EBF3-201ENST00000355311 FBN1P35555 2871 aaKnown RBP9.89□□□□□ -0.83
EBF3-201ENST00000355311 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
EBF3-201ENST00000355311 SPATA3Q8NHX4 192 aa9.87□□□□□ -0.83
EBF3-201ENST00000355311 LITAFQ99732 161 aa9.87□□□□□ -0.83
EBF3-201ENST00000355311 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
EBF3-201ENST00000355311 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
EBF3-201ENST00000355311 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.87□□□□□ -0.83
EBF3-201ENST00000355311 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
EBF3-201ENST00000355311 NOTCH1P46531 2555 aa9.86□□□□□ -0.83
EBF3-201ENST00000355311 LINC01006Q8NI28 216 aa9.86□□□□□ -0.83
EBF3-201ENST00000355311 Q9H8V8 135 aa9.85□□□□□ -0.83
EBF3-201ENST00000355311 STAB1Q9NY15 2570 aa9.85□□□□□ -0.83
EBF3-201ENST00000355311 TMEM101Q96IK0 257 aa9.84□□□□□ -0.83
EBF3-201ENST00000355311 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
EBF3-201ENST00000355311 IGHV1-58A0A0C4DH39 117 aa9.84□□□□□ -0.83
EBF3-201ENST00000355311 COX6CP09669 75 aa9.84□□□□□ -0.83
EBF3-201ENST00000355311 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
EBF3-201ENST00000355311 HERVK_113P63121 156 aa9.83□□□□□ -0.84
EBF3-201ENST00000355311 MRPS36P82909 103 aaKnown RBP9.83□□□□□ -0.84
EBF3-201ENST00000355311 PIK3CD-AS1Q5SR53 167 aa9.83□□□□□ -0.84
EBF3-201ENST00000355311 NSD1Q96L73 2696 aaPredicted RBP9.83□□□□□ -0.84
EBF3-201ENST00000355311 NBEAL1Q6ZS30 2694 aa9.82□□□□□ -0.84
EBF3-201ENST00000355311 LST1O00453 97 aa9.82□□□□□ -0.84
EBF3-201ENST00000355311 Q8N2B8 174 aa9.82□□□□□ -0.84
EBF3-201ENST00000355311 RNF152Q8N8N0 203 aa9.82□□□□□ -0.84
EBF3-201ENST00000355311 LINC00482Q8N8I6 264 aa9.82□□□□□ -0.84
EBF3-201ENST00000355311 EDA2RQ9HAV5 297 aa9.82□□□□□ -0.84
EBF3-201ENST00000355311 CSDC2Q9Y534 153 aaKnown RBP9.82□□□□□ -0.84
EBF3-201ENST00000355311 GIG44P09565 113 aaPredicted RBP9.81□□□□□ -0.84
EBF3-201ENST00000355311 LINC00242Q5T6M2 205 aa9.81□□□□□ -0.84
EBF3-201ENST00000355311 MAST4O15021 2626 aa9.81□□□□□ -0.84
EBF3-201ENST00000355311 TRGV4A0A0C4DH28 118 aa9.81□□□□□ -0.84
EBF3-201ENST00000355311 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
EBF3-201ENST00000355311 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
EBF3-201ENST00000355311 H3BT86 120 aa9.79□□□□□ -0.84
EBF3-201ENST00000355311 C5orf38Q86SI9 138 aa9.79□□□□□ -0.84
EBF3-201ENST00000355311 PRIMA1Q86XR5 153 aa9.79□□□□□ -0.84
EBF3-201ENST00000355311 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
EBF3-201ENST00000355311 F8P00451 2351 aa9.79□□□□□ -0.84
EBF3-201ENST00000355311 TRBV7-7A0A0K0K1E9 115 aa9.78□□□□□ -0.84
EBF3-201ENST00000355311 UBE2L6O14933 153 aa9.78□□□□□ -0.84
EBF3-201ENST00000355311 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
EBF3-201ENST00000355311 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
EBF3-201ENST00000355311 Q9HAA7 133 aa9.78□□□□□ -0.84
EBF3-201ENST00000355311 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
EBF3-201ENST00000355311 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
EBF3-201ENST00000355311 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
EBF3-201ENST00000355311 K7EQD1 137 aa9.78□□□□□ -0.84
EBF3-201ENST00000355311 TMEM126AQ9H061 195 aa9.78□□□□□ -0.84
EBF3-201ENST00000355311 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 PFN2P35080 140 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 MIAQ16674 131 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 Q8N3U1 123 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 C3orf22Q8N5N4 141 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 KIR2DL5BQ8NHK3 375 aa9.77□□□□□ -0.85
EBF3-201ENST00000355311 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
EBF3-201ENST00000355311 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
EBF3-201ENST00000355311 SPANXA1Q9NS26 97 aa9.75□□□□□ -0.85
EBF3-201ENST00000355311 A0A087WVE0 104 aa9.75□□□□□ -0.85
EBF3-201ENST00000355311 BEAN1Q3B7T3 259 aa9.75□□□□□ -0.85
EBF3-201ENST00000355311 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
EBF3-201ENST00000355311 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
EBF3-201ENST00000355311 KRTAP10-3P60369 221 aa9.74□□□□□ -0.85
EBF3-201ENST00000355311 KRTAP1-1Q07627 177 aa9.74□□□□□ -0.85
EBF3-201ENST00000355311 C9orf129Q5T035 196 aaKnown RBP9.74□□□□□ -0.85
EBF3-201ENST00000355311 IGKV3D-7A0A0C4DH55 119 aa9.74□□□□□ -0.85
EBF3-201ENST00000355311 PF4P02776 101 aa9.74□□□□□ -0.85
EBF3-201ENST00000355311 HTN3P15516 51 aa9.74□□□□□ -0.85
EBF3-201ENST00000355311 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
EBF3-201ENST00000355311 DNAJC30Q96LL9 226 aa9.73□□□□□ -0.85
EBF3-201ENST00000355311 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
EBF3-201ENST00000355311 TIRAPP58753 221 aa9.73□□□□□ -0.85
EBF3-201ENST00000355311 BAALC-AS2P0C853 105 aa9.72□□□□□ -0.85
EBF3-201ENST00000355311 PLAC8L1A1L4L8 177 aa9.72□□□□□ -0.85
EBF3-201ENST00000355311 XCL1P47992 114 aa9.72□□□□□ -0.85
EBF3-201ENST00000355311 CDC42SE2Q9NRR3 84 aa9.72□□□□□ -0.85
EBF3-201ENST00000355311 UQCRQO14949 82 aa9.72□□□□□ -0.85
EBF3-201ENST00000355311 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
EBF3-201ENST00000355311 DEFB121Q5J5C9 76 aa9.71□□□□□ -0.85
EBF3-201ENST00000355311 SMIM9A6NGZ8 99 aa9.71□□□□□ -0.86
EBF3-201ENST00000355311 LINC00526Q96FQ7 95 aa9.71□□□□□ -0.86
EBF3-201ENST00000355311 DSCR8Q96T75 97 aa9.71□□□□□ -0.86
EBF3-201ENST00000355311 TMEM243Q9BU79 118 aa9.71□□□□□ -0.86
EBF3-201ENST00000355311 SPANXDQ9BXN6 97 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms