RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 A0A0J9YX75 114 aa7.32□□□□□ -1.24
SYNE1-203ENST00000354674 A8MTW9 85 aa7.32□□□□□ -1.24
SYNE1-203ENST00000354674 FHL2Q14192 279 aa7.32□□□□□ -1.24
SYNE1-203ENST00000354674 APRG1Q8IVJ8 170 aa7.32□□□□□ -1.24
SYNE1-203ENST00000354674 PHLDA3Q9Y5J5 127 aa7.32□□□□□ -1.24
SYNE1-203ENST00000354674 SETD2Q9BYW2 2564 aaPredicted RBP7.32□□□□□ -1.24
SYNE1-203ENST00000354674 F6UB75 175 aa7.32□□□□□ -1.24
SYNE1-203ENST00000354674 TEP1Q99973 2627 aaKnown RBP7.32□□□□□ -1.24
SYNE1-203ENST00000354674 GNRH2O43555 120 aa7.31□□□□□ -1.24
SYNE1-203ENST00000354674 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
SYNE1-203ENST00000354674 MRAPQ8TCY5 172 aa7.31□□□□□ -1.24
SYNE1-203ENST00000354674 A0A0J9YXY3 114 aa7.31□□□□□ -1.24
SYNE1-203ENST00000354674 TRBV30A0A0K0K1B3 111 aa7.31□□□□□ -1.24
SYNE1-203ENST00000354674 TIRAPP58753 221 aa7.31□□□□□ -1.24
SYNE1-203ENST00000354674 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
SYNE1-203ENST00000354674 A0A0B4J2C4 111 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 H3BT86 120 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 BEAN1Q3B7T3 259 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 PRR9Q5T870 116 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 C20orf197Q8N268 126 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 ZFAND2AQ8N6M9 145 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 SPATA3Q8NHX4 192 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 MAP6D1Q9H9H5 199 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 TRAV23DV6A0A075B6W5 121 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 LST1O00453 97 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 MALP21145 153 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 PRO0628Q9UI54 55 aa7.3□□□□□ -1.24
SYNE1-203ENST00000354674 F8WDY8 70 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 DEFB131AP59861 70 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 KLLNB2CW77 178 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 ATOX1O00244 68 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 BAALC-AS2P0C853 105 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 TMEM258P61165 79 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 ODF3L2Q3SX64 289 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 JMJD1CQ15652 2540 aa7.29□□□□□ -1.24
SYNE1-203ENST00000354674 C9orf66Q5T8R8 295 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 C14orf132Q9NPU4 83 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 FAM240AA0A1B0GVK7 77 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 CMC4P56277 68 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-203ENST00000354674 C9orf129Q5T035 196 aaKnown RBP7.28□□□□□ -1.24
SYNE1-203ENST00000354674 C19orf73Q9NVV2 129 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 V9GYY9 64 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 VWFP04275 2813 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 RPL18AQ02543 176 aaKnown RBP7.28□□□□□ -1.24
SYNE1-203ENST00000354674 TMEM243Q9BU79 118 aa7.28□□□□□ -1.24
SYNE1-203ENST00000354674 SS18Q15532 418 aa7.27□□□□□ -1.25
SYNE1-203ENST00000354674 IMUPQ9GZP8 106 aa7.27□□□□□ -1.25
SYNE1-203ENST00000354674 USP17L23D6RBM5 183 aa7.27□□□□□ -1.25
SYNE1-203ENST00000354674 ATRQ13535 2644 aa7.27□□□□□ -1.25
SYNE1-203ENST00000354674 IGIPA6NJ69 53 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 KNCNA6PVL3 124 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 IGHV3-30-3P0DP02 117 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 S100A7L2Q5SY68 101 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 CMYA5Q8N3K9 4069 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 ANK2Q01484 3957 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 RNASE4P34096 147 aaKnown RBP7.26□□□□□ -1.25
SYNE1-203ENST00000354674 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
SYNE1-203ENST00000354674 RBMY1BA6NDE4 496 aaKnown RBP7.26□□□□□ -1.25
SYNE1-203ENST00000354674 RBMY1EA6NEQ0 496 aaKnown RBP7.26□□□□□ -1.25
SYNE1-203ENST00000354674 RBMY1DP0C7P1 496 aaKnown RBP7.26□□□□□ -1.25
SYNE1-203ENST00000354674 SDHAF1A6NFY7 115 aa7.25□□□□□ -1.25
SYNE1-203ENST00000354674 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
SYNE1-203ENST00000354674 NDUFA12Q9UI09 145 aa7.25□□□□□ -1.25
SYNE1-203ENST00000354674 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
SYNE1-203ENST00000354674 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
SYNE1-203ENST00000354674 C5orf38Q86SI9 138 aa7.25□□□□□ -1.25
SYNE1-203ENST00000354674 MUC4Q99102 2169 aa7.25□□□□□ -1.25
SYNE1-203ENST00000354674 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
SYNE1-203ENST00000354674 TRAV21A0A0B4J279 112 aa7.24□□□□□ -1.25
SYNE1-203ENST00000354674 LEPROTO15243 131 aa7.24□□□□□ -1.25
SYNE1-203ENST00000354674 DNAL4O96015 105 aa7.24□□□□□ -1.25
SYNE1-203ENST00000354674 WNK1Q9H4A3 2382 aa7.24□□□□□ -1.25
SYNE1-203ENST00000354674 ZNF876PQ49A33 203 aa7.24□□□□□ -1.25
SYNE1-203ENST00000354674 RBM3P98179 157 aaKnown RBP7.24□□□□□ -1.25
SYNE1-203ENST00000354674 FAM218AQ96MZ4 157 aa7.24□□□□□ -1.25
SYNE1-203ENST00000354674 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
SYNE1-203ENST00000354674 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
SYNE1-203ENST00000354674 LINC00846Q9NV44 126 aa7.23□□□□□ -1.25
SYNE1-203ENST00000354674 GHRHP01286 108 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 IGKV3-20P01619 116 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 ACYP1P07311 99 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 SPINK13Q1W4C9 94 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 SOSTDC1Q6X4U4 206 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 ATP5G1P05496 136 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 HTN1P15515 57 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 SLPIP03973 132 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 SUMO4Q6EEV6 95 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 STHQ8IWL8 128 aa7.22□□□□□ -1.25
SYNE1-203ENST00000354674 TRAV12-2A0A075B6T6 113 aa7.21□□□□□ -1.25
SYNE1-203ENST00000354674 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.25
SYNE1-203ENST00000354674 LITAFQ99732 161 aa7.21□□□□□ -1.25
SYNE1-203ENST00000354674 DEFB121Q5J5C9 76 aa7.21□□□□□ -1.26
SYNE1-203ENST00000354674 C9orf85Q96MD7 179 aa7.21□□□□□ -1.26
SYNE1-203ENST00000354674 NCR3O14931 201 aa7.2□□□□□ -1.26
SYNE1-203ENST00000354674 RBMY1A1P0DJD3 496 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms