RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 WNK1Q9H4A3 2382 aa5.48□□□□□ -1.53
BRCA1-201ENST00000352993 TRGV1A0A0A0MS02 117 aa5.48□□□□□ -1.53
BRCA1-201ENST00000352993 IGLV5-39A0A0G2JS06 123 aa5.48□□□□□ -1.53
BRCA1-201ENST00000352993 H0YGX0 51 aa5.48□□□□□ -1.53
BRCA1-201ENST00000352993 IGLV5-45A0A087WSX0 123 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 FAM19A1Q7Z5A9 133 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 A0A1W2PPR1 153 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 PF4P02776 101 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 UBE2E2Q96LR5 201 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 ORMDL1Q9P0S3 153 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 AKAP9Q99996 3911 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 WIPF1O43516 503 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 UPK3BQ9BT76 320 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 XCL2Q9UBD3 114 aa5.47□□□□□ -1.53
BRCA1-201ENST00000352993 FAM236DA0A1B0GTK5 79 aa5.46□□□□□ -1.53
BRCA1-201ENST00000352993 K7ENP7 123 aa5.46□□□□□ -1.53
BRCA1-201ENST00000352993 FAM236CP0DP71 79 aa5.46□□□□□ -1.53
BRCA1-201ENST00000352993 S100A7L2Q5SY68 101 aa5.46□□□□□ -1.53
BRCA1-201ENST00000352993 COX7B2Q8TF08 81 aa5.46□□□□□ -1.53
BRCA1-201ENST00000352993 ADORA2A-AS1P86434 159 aa5.46□□□□□ -1.54
BRCA1-201ENST00000352993 IGKV2-28A0A075B6P5 120 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 IGKV2D-28P01615 120 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 IGLV1-40P01703 118 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 Q5XG85 94 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 PKIGQ9Y2B9 76 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 BAHCC1Q9P281 2608 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 GCN1Q92616 2671 aaKnown RBP5.45□□□□□ -1.54
BRCA1-201ENST00000352993 A6NDX4 124 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 CCL18P55774 89 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 FBXL19-AS1Q494R0 122 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 UBL5Q9BZL1 73 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 PKD1L2Q7Z442 2459 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 NBPF19A0A087WUL8 3843 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 NDUFC2O95298 119 aa5.45□□□□□ -1.54
BRCA1-201ENST00000352993 PSMB8P28062 276 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 DEFB136Q30KP8 78 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 Q96MF0 132 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 HRNRQ86YZ3 2850 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-201ENST00000352993 HAMPP81172 84 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 HIVEP3Q5T1R4 2406 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 CCKP06307 115 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 WFDC11Q8NEX6 87 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 DYNLRB2Q8TF09 96 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
BRCA1-201ENST00000352993 CELSR1Q9NYQ6 3014 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 IGHV4-61A0A0C4DH41 118 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 XCL1P47992 114 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 C6orf226Q5I0X4 101 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 CDC42SE2Q9NRR3 84 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 COL12A1Q99715 3063 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 INSP01308 110 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 MRAPQ8TCY5 172 aa5.43□□□□□ -1.54
BRCA1-201ENST00000352993 IGHV4-59P01825 116 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 SLURP1P55000 103 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 IGF2RP11717 2491 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 NCOR2Q9Y618 2525 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 ABCA2Q9BZC7 2435 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 RBM3P98179 157 aaKnown RBP5.42□□□□□ -1.54
BRCA1-201ENST00000352993 NTM-AS1Q6ZSK4 140 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 CYSRT1A8MQ03 144 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 LINC00336Q6ZUF6 198 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 TMEM86BQ8N661 226 aa5.42□□□□□ -1.54
BRCA1-201ENST00000352993 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
BRCA1-201ENST00000352993 K7EQD1 137 aa5.41□□□□□ -1.54
BRCA1-201ENST00000352993 PRR3P79522 188 aaKnown RBP5.41□□□□□ -1.54
BRCA1-201ENST00000352993 LAMTOR3Q9UHA4 124 aa5.41□□□□□ -1.54
BRCA1-201ENST00000352993 TRGV2A0A075B6R0 118 aa5.41□□□□□ -1.54
BRCA1-201ENST00000352993 Q6ZTI0 123 aa5.41□□□□□ -1.54
BRCA1-201ENST00000352993 PRB1P04280 392 aa5.41□□□□□ -1.54
BRCA1-201ENST00000352993 FAM208BQ5VWN6 2430 aa5.4□□□□□ -1.54
BRCA1-201ENST00000352993 CFAP46Q8IYW2 2715 aa5.4□□□□□ -1.54
BRCA1-201ENST00000352993 ACACBO00763 2458 aa5.4□□□□□ -1.55
BRCA1-201ENST00000352993 A0A0U1RQV1 116 aa5.4□□□□□ -1.55
BRCA1-201ENST00000352993 NDUFC2-KCTD14E9PQ53 114 aa5.4□□□□□ -1.55
BRCA1-201ENST00000352993 J3QKU1 62 aa5.4□□□□□ -1.55
BRCA1-201ENST00000352993 RPL35AP18077 110 aaKnown RBP5.4□□□□□ -1.55
BRCA1-201ENST00000352993 C11orf72Q8NBR9 251 aa5.4□□□□□ -1.55
BRCA1-201ENST00000352993 EPG5Q9HCE0 2579 aa5.4□□□□□ -1.55
BRCA1-201ENST00000352993 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 RMI2Q96E14 147 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 MYO9AB2RTY4 2548 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 LOC100131303A0A0U1RQF7 123 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 TMEM89A2RUT3 159 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 TMEM256-PLSCR3K7ERE1 68 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 STHQ8IWL8 128 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
BRCA1-201ENST00000352993 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 J3QLI3 93 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 CLPSL2Q6UWE3 100 aa5.39□□□□□ -1.55
BRCA1-201ENST00000352993 IBA57-AS1B1ANH7 110 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 F8WEM9 126 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 DEFB112Q30KQ8 113 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 C18orf65Q6ZTR6 163 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 OBSCN-AS1Q96MR7 158 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 PTPN13Q12923 2485 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 TRGV4A0A0C4DH28 118 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 TRBV6-4A0A1B0GX49 114 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 MAP6D1Q9H9H5 199 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms