RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 ZNF415Q09FC8 603 aa13.43□□□□□ -0.26
SPNS1-204ENST00000352260 C19orf73Q9NVV2 129 aa13.41□□□□□ -0.26
SPNS1-204ENST00000352260 C11orf72Q8NBR9 251 aa13.41□□□□□ -0.26
SPNS1-204ENST00000352260 WFDC10AQ9H1F0 79 aa13.41□□□□□ -0.26
SPNS1-204ENST00000352260 COL6A5A8TX70 2615 aa13.4□□□□□ -0.26
SPNS1-204ENST00000352260 C1orf158Q8N1D5 194 aa13.4□□□□□ -0.26
SPNS1-204ENST00000352260 NDUFA12Q9UI09 145 aa13.4□□□□□ -0.26
SPNS1-204ENST00000352260 PRSS2P07478 247 aa13.39□□□□□ -0.27
SPNS1-204ENST00000352260 LINC00643Q86TS7 51 aa13.39□□□□□ -0.27
SPNS1-204ENST00000352260 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
SPNS1-204ENST00000352260 CHCHD5Q9BSY4 110 aa13.39□□□□□ -0.27
SPNS1-204ENST00000352260 IGHV3-64A0A075B6Q5 118 aa13.39□□□□□ -0.27
SPNS1-204ENST00000352260 TINCRA0A1B0GVN0 87 aa13.39□□□□□ -0.27
SPNS1-204ENST00000352260 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.39□□□□□ -0.27
SPNS1-204ENST00000352260 VSIG2Q96IQ7 327 aa13.38□□□□□ -0.27
SPNS1-204ENST00000352260 DNAJC30Q96LL9 226 aa13.38□□□□□ -0.27
SPNS1-204ENST00000352260 UQCRQO14949 82 aa13.37□□□□□ -0.27
SPNS1-204ENST00000352260 CXCL5P42830 114 aa13.37□□□□□ -0.27
SPNS1-204ENST00000352260 KRTAP21-3Q3LHN1 58 aa13.37□□□□□ -0.27
SPNS1-204ENST00000352260 PIK3CD-AS1Q5SR53 167 aa13.37□□□□□ -0.27
SPNS1-204ENST00000352260 SDIM1Q6ZPB5 146 aa13.37□□□□□ -0.27
SPNS1-204ENST00000352260 C3orf22Q8N5N4 141 aa13.37□□□□□ -0.27
SPNS1-204ENST00000352260 SPXQ9BT56 116 aa13.37□□□□□ -0.27
SPNS1-204ENST00000352260 ADAMTSL4-AS1Q5T5F5 129 aa13.36□□□□□ -0.27
SPNS1-204ENST00000352260 COPS9Q8WXC6 57 aa13.36□□□□□ -0.27
SPNS1-204ENST00000352260 MDFIQ99750 246 aa13.36□□□□□ -0.27
SPNS1-204ENST00000352260 IGHV3OR16-12A0A075B7B8 117 aa13.35□□□□□ -0.27
SPNS1-204ENST00000352260 GIG44P09565 113 aaPredicted RBP13.35□□□□□ -0.27
SPNS1-204ENST00000352260 CLEC2BQ92478 149 aa13.35□□□□□ -0.27
SPNS1-204ENST00000352260 FAM236AA0A1B0GUQ0 79 aa13.35□□□□□ -0.27
SPNS1-204ENST00000352260 FAM236BA0A1B0GV22 79 aa13.35□□□□□ -0.27
SPNS1-204ENST00000352260 RPL35AP18077 110 aaKnown RBP13.35□□□□□ -0.27
SPNS1-204ENST00000352260 IGHV3-73A0A0B4J1V6 119 aa13.34□□□□□ -0.27
SPNS1-204ENST00000352260 KRTAP24-1Q3LI83 254 aa13.33□□□□□ -0.28
SPNS1-204ENST00000352260 SPATA3Q8NHX4 192 aa13.33□□□□□ -0.28
SPNS1-204ENST00000352260 IL17DQ8TAD2 202 aa13.33□□□□□ -0.28
SPNS1-204ENST00000352260 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
SPNS1-204ENST00000352260 PPDPFQ9H3Y8 114 aa13.33□□□□□ -0.28
SPNS1-204ENST00000352260 A0A1B0GX51 115 aa13.32□□□□□ -0.28
SPNS1-204ENST00000352260 DEFB104AQ8WTQ1 72 aa13.32□□□□□ -0.28
SPNS1-204ENST00000352260 COX7A2LO14548 114 aa13.31□□□□□ -0.28
SPNS1-204ENST00000352260 CIRBPQ14011 172 aaKnown RBP13.31□□□□□ -0.28
SPNS1-204ENST00000352260 C9orf153Q5TBE3 101 aa13.31□□□□□ -0.28
SPNS1-204ENST00000352260 FAM104AQ969W3 186 aa13.31□□□□□ -0.28
SPNS1-204ENST00000352260 NDUFA1O15239 70 aa13.31□□□□□ -0.28
SPNS1-204ENST00000352260 TRACP01848 142 aa13.31□□□□□ -0.28
SPNS1-204ENST00000352260 DAND5Q8N907 189 aa13.31□□□□□ -0.28
SPNS1-204ENST00000352260 STAB1Q9NY15 2570 aa13.3□□□□□ -0.28
SPNS1-204ENST00000352260 TRAV8-3A0A0A6YYJ7 113 aa13.3□□□□□ -0.28
SPNS1-204ENST00000352260 RS1O15537 224 aa13.3□□□□□ -0.28
SPNS1-204ENST00000352260 FAM222AQ5U5X8 452 aa13.3□□□□□ -0.28
SPNS1-204ENST00000352260 C9orf66Q5T8R8 295 aa13.29□□□□□ -0.28
SPNS1-204ENST00000352260 C5orf38Q86SI9 138 aa13.29□□□□□ -0.28
SPNS1-204ENST00000352260 Q6ZSN1 163 aa13.29□□□□□ -0.28
SPNS1-204ENST00000352260 TIRAPP58753 221 aa13.28□□□□□ -0.28
SPNS1-204ENST00000352260 IGLV5-45A0A087WSX0 123 aa13.27□□□□□ -0.28
SPNS1-204ENST00000352260 CSNK1G2-AS1Q8NCQ2 148 aa13.27□□□□□ -0.28
SPNS1-204ENST00000352260 NACAE9PAV3 2078 aa13.27□□□□□ -0.28
SPNS1-204ENST00000352260 INAFM2P0DMQ5 153 aa13.27□□□□□ -0.29
SPNS1-204ENST00000352260 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
SPNS1-204ENST00000352260 RPS28P62857 69 aaKnown RBP13.26□□□□□ -0.29
SPNS1-204ENST00000352260 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
SPNS1-204ENST00000352260 DNHD1Q96M86 4753 aa13.25□□□□□ -0.29
SPNS1-204ENST00000352260 J3KT08 172 aa13.25□□□□□ -0.29
SPNS1-204ENST00000352260 COX7CP15954 63 aa13.25□□□□□ -0.29
SPNS1-204ENST00000352260 IGHV3-53P01767 116 aa13.24□□□□□ -0.29
SPNS1-204ENST00000352260 UBE2D4Q9Y2X8 147 aa13.24□□□□□ -0.29
SPNS1-204ENST00000352260 CRYGAP11844 174 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 Q6ZTI0 123 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 SMCR5Q8TEV8 140 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 C16orf74Q96GX8 76 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 Q9UF83 564 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 PLAC8L1A1L4L8 177 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 LINC00694P0DN24 101 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 HIST1H4AP62805 103 aaKnown RBP13.23□□□□□ -0.29
SPNS1-204ENST00000352260 LINC00308Q8TCZ7 52 aa13.23□□□□□ -0.29
SPNS1-204ENST00000352260 ATOX1O00244 68 aa13.22□□□□□ -0.29
SPNS1-204ENST00000352260 HERVK_113P63121 156 aa13.22□□□□□ -0.29
SPNS1-204ENST00000352260 DAZ2Q13117 558 aaKnown RBP13.22□□□□□ -0.29
SPNS1-204ENST00000352260 NOP10Q9NPE3 64 aaKnown RBP13.22□□□□□ -0.29
SPNS1-204ENST00000352260 C5orf47Q569G3 176 aa13.21□□□□□ -0.29
SPNS1-204ENST00000352260 CHCHD7Q9BUK0 85 aa13.21□□□□□ -0.29
SPNS1-204ENST00000352260 CSDC2Q9Y534 153 aaKnown RBP13.21□□□□□ -0.29
SPNS1-204ENST00000352260 CEMP1Q6PRD7 247 aaPredicted RBP13.21□□□□□ -0.3
SPNS1-204ENST00000352260 DAZ4Q86SG3 579 aaKnown RBP13.21□□□□□ -0.3
SPNS1-204ENST00000352260 DAZ3Q9NR90 486 aaKnown RBP13.21□□□□□ -0.3
SPNS1-204ENST00000352260 OVOL2Q9BRP0 275 aa13.2□□□□□ -0.3
SPNS1-204ENST00000352260 IGLV5-39A0A0G2JS06 123 aa13.19□□□□□ -0.3
SPNS1-204ENST00000352260 NPC2P61916 151 aa13.19□□□□□ -0.3
SPNS1-204ENST00000352260 FAM19A3Q7Z5A8 133 aa13.19□□□□□ -0.3
SPNS1-204ENST00000352260 BAALC-AS2P0C853 105 aa13.18□□□□□ -0.3
SPNS1-204ENST00000352260 WFDC9Q8NEX5 89 aa13.17□□□□□ -0.3
SPNS1-204ENST00000352260 C2orf48Q96LS8 159 aa13.17□□□□□ -0.3
SPNS1-204ENST00000352260 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
SPNS1-204ENST00000352260 CDKN2A-AS1Q9UH64 79 aa13.15□□□□□ -0.3
SPNS1-204ENST00000352260 A8MZ25 164 aa13.15□□□□□ -0.3
SPNS1-204ENST00000352260 GAGE2AQ6NT46 116 aa13.15□□□□□ -0.3
SPNS1-204ENST00000352260 K7EQD1 137 aa13.14□□□□□ -0.31
SPNS1-204ENST00000352260 IGHV3-38A0A0C4DH36 116 aa13.13□□□□□ -0.31
SPNS1-204ENST00000352260 OR13C6PQ8NH95 151 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms