RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RPS28P62857 69 aaKnown RBP13.4□□□□□ -0.26
SCARF1-202ENST00000348987 FAM222AQ5U5X8 452 aa13.4□□□□□ -0.26
SCARF1-202ENST00000348987 DGAT2L7PQ6IED9 249 aa13.4□□□□□ -0.26
SCARF1-202ENST00000348987 AKAP9Q99996 3911 aa13.4□□□□□ -0.26
SCARF1-202ENST00000348987 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.26
SCARF1-202ENST00000348987 ACANP16112 2415 aa13.39□□□□□ -0.27
SCARF1-202ENST00000348987 IGHV3OR16-12A0A075B7B8 117 aa13.39□□□□□ -0.27
SCARF1-202ENST00000348987 IGKV3D-7A0A0C4DH55 119 aa13.39□□□□□ -0.27
SCARF1-202ENST00000348987 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
SCARF1-202ENST00000348987 C9orf129Q5T035 196 aaKnown RBP13.39□□□□□ -0.27
SCARF1-202ENST00000348987 PRIMA1Q86XR5 153 aa13.39□□□□□ -0.27
SCARF1-202ENST00000348987 ITPR3Q14573 2671 aa13.39□□□□□ -0.27
SCARF1-202ENST00000348987 TENM4Q6N022 2769 aa13.39□□□□□ -0.27
SCARF1-202ENST00000348987 RPL18AQ02543 176 aaKnown RBP13.38□□□□□ -0.27
SCARF1-202ENST00000348987 LINC00242Q5T6M2 205 aa13.38□□□□□ -0.27
SCARF1-202ENST00000348987 HIST2H2BCQ6DN03 193 aa13.37□□□□□ -0.27
SCARF1-202ENST00000348987 OR13C6PQ8NH95 151 aa13.37□□□□□ -0.27
SCARF1-202ENST00000348987 ZNF702PQ9H963 129 aa13.37□□□□□ -0.27
SCARF1-202ENST00000348987 WNK1Q9H4A3 2382 aa13.37□□□□□ -0.27
SCARF1-202ENST00000348987 A0A087WVE0 104 aa13.37□□□□□ -0.27
SCARF1-202ENST00000348987 SLURP1P55000 103 aa13.37□□□□□ -0.27
SCARF1-202ENST00000348987 COPS9Q8WXC6 57 aa13.37□□□□□ -0.27
SCARF1-202ENST00000348987 DNAL4O96015 105 aa13.36□□□□□ -0.27
SCARF1-202ENST00000348987 C14orf132Q9NPU4 83 aa13.36□□□□□ -0.27
SCARF1-202ENST00000348987 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
SCARF1-202ENST00000348987 DPH3Q96FX2 82 aa13.36□□□□□ -0.27
SCARF1-202ENST00000348987 FLNAP21333 2647 aaKnown RBP13.35□□□□□ -0.27
SCARF1-202ENST00000348987 DSCR9P59020 149 aa13.35□□□□□ -0.27
SCARF1-202ENST00000348987 CR1P17927 2039 aa13.34□□□□□ -0.27
SCARF1-202ENST00000348987 DEFB131AP59861 70 aa13.34□□□□□ -0.27
SCARF1-202ENST00000348987 TMEM89A2RUT3 159 aa13.33□□□□□ -0.28
SCARF1-202ENST00000348987 UBE2E2Q96LR5 201 aa13.33□□□□□ -0.28
SCARF1-202ENST00000348987 DSCR8Q96T75 97 aa13.33□□□□□ -0.28
SCARF1-202ENST00000348987 LINC00846Q9NV44 126 aa13.33□□□□□ -0.28
SCARF1-202ENST00000348987 MTORP42345 2549 aa13.33□□□□□ -0.28
SCARF1-202ENST00000348987 C2CD3Q4AC94 2353 aa13.33□□□□□ -0.28
SCARF1-202ENST00000348987 RBMY1BA6NDE4 496 aaKnown RBP13.33□□□□□ -0.28
SCARF1-202ENST00000348987 RBMY1EA6NEQ0 496 aaKnown RBP13.33□□□□□ -0.28
SCARF1-202ENST00000348987 RBMY1DP0C7P1 496 aaKnown RBP13.33□□□□□ -0.28
SCARF1-202ENST00000348987 A0A087WYN8 130 aa13.32□□□□□ -0.28
SCARF1-202ENST00000348987 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
SCARF1-202ENST00000348987 OXTP01178 125 aa13.32□□□□□ -0.28
SCARF1-202ENST00000348987 IGHV4-31P0DP07 118 aa13.32□□□□□ -0.28
SCARF1-202ENST00000348987 Q6YL49 198 aa13.32□□□□□ -0.28
SCARF1-202ENST00000348987 SERP2Q8N6R1 65 aa13.32□□□□□ -0.28
SCARF1-202ENST00000348987 RPL28P46779 137 aaKnown RBP13.31□□□□□ -0.28
SCARF1-202ENST00000348987 UPK3BQ9BT76 320 aa13.31□□□□□ -0.28
SCARF1-202ENST00000348987 TMEM258P61165 79 aa13.31□□□□□ -0.28
SCARF1-202ENST00000348987 LINC00337Q8N6G1 96 aa13.3□□□□□ -0.28
SCARF1-202ENST00000348987 LINC01561Q8N1V8 128 aa13.3□□□□□ -0.28
SCARF1-202ENST00000348987 IGHV3-53P01767 116 aa13.29□□□□□ -0.28
SCARF1-202ENST00000348987 ITPR2Q14571 2701 aa13.29□□□□□ -0.28
SCARF1-202ENST00000348987 CRPP02741 224 aa13.29□□□□□ -0.28
SCARF1-202ENST00000348987 Q96MF0 132 aa13.29□□□□□ -0.28
SCARF1-202ENST00000348987 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
SCARF1-202ENST00000348987 J3QLI3 93 aa13.28□□□□□ -0.28
SCARF1-202ENST00000348987 FSHBP01225 129 aa13.28□□□□□ -0.28
SCARF1-202ENST00000348987 Q6JHZ5 121 aa13.28□□□□□ -0.28
SCARF1-202ENST00000348987 RNF152Q8N8N0 203 aa13.28□□□□□ -0.28
SCARF1-202ENST00000348987 ZNF415Q09FC8 603 aa13.27□□□□□ -0.28
SCARF1-202ENST00000348987 USP17L23D6RBM5 183 aa13.27□□□□□ -0.29
SCARF1-202ENST00000348987 C4orf26Q17RF5 130 aa13.27□□□□□ -0.29
SCARF1-202ENST00000348987 IGKV2-28A0A075B6P5 120 aa13.26□□□□□ -0.29
SCARF1-202ENST00000348987 IGKV2D-28P01615 120 aa13.26□□□□□ -0.29
SCARF1-202ENST00000348987 F5H768 121 aa13.26□□□□□ -0.29
SCARF1-202ENST00000348987 KHDC1LQ5JSQ8 128 aa13.26□□□□□ -0.29
SCARF1-202ENST00000348987 SMIM11BQ8TCY0 68 aa13.26□□□□□ -0.29
SCARF1-202ENST00000348987 NCR3O14931 201 aa13.25□□□□□ -0.29
SCARF1-202ENST00000348987 PF4P02776 101 aa13.25□□□□□ -0.29
SCARF1-202ENST00000348987 MIR7-3HGQ8N6C7 128 aa13.25□□□□□ -0.29
SCARF1-202ENST00000348987 DEFB113Q30KQ7 82 aa13.25□□□□□ -0.29
SCARF1-202ENST00000348987 HELZ2Q9BYK8 2649 aaKnown RBP13.24□□□□□ -0.29
SCARF1-202ENST00000348987 WIPF1O43516 503 aa13.24□□□□□ -0.29
SCARF1-202ENST00000348987 SND1-IT1Q9HBX3 110 aa13.24□□□□□ -0.29
SCARF1-202ENST00000348987 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
SCARF1-202ENST00000348987 TRAV25A0A0B4J276 109 aa13.24□□□□□ -0.29
SCARF1-202ENST00000348987 C11orf44Q8N8P7 122 aa13.23□□□□□ -0.29
SCARF1-202ENST00000348987 OBSCN-AS1Q96MR7 158 aa13.23□□□□□ -0.29
SCARF1-202ENST00000348987 LECT2O14960 151 aa13.22□□□□□ -0.29
SCARF1-202ENST00000348987 FAM19A3Q7Z5A8 133 aa13.22□□□□□ -0.29
SCARF1-202ENST00000348987 SLPIP03973 132 aa13.22□□□□□ -0.29
SCARF1-202ENST00000348987 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
SCARF1-202ENST00000348987 C11orf72Q8NBR9 251 aa13.21□□□□□ -0.29
SCARF1-202ENST00000348987 MAP6D1Q9H9H5 199 aa13.21□□□□□ -0.29
SCARF1-202ENST00000348987 HRCT1Q6UXD1 115 aa13.21□□□□□ -0.3
SCARF1-202ENST00000348987 WFDC11Q8NEX6 87 aa13.21□□□□□ -0.3
SCARF1-202ENST00000348987 Q5XG85 94 aa13.2□□□□□ -0.3
SCARF1-202ENST00000348987 NTM-AS1Q6ZSK4 140 aa13.2□□□□□ -0.3
SCARF1-202ENST00000348987 KRTAP1-3Q8IUG1 177 aa13.2□□□□□ -0.3
SCARF1-202ENST00000348987 A8MTW9 85 aa13.19□□□□□ -0.3
SCARF1-202ENST00000348987 HILS1P60008 231 aa13.19□□□□□ -0.3
SCARF1-202ENST00000348987 FHL2Q14192 279 aa13.19□□□□□ -0.3
SCARF1-202ENST00000348987 CDC42SE2Q9NRR3 84 aa13.19□□□□□ -0.3
SCARF1-202ENST00000348987 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
SCARF1-202ENST00000348987 H0YGX0 51 aa13.18□□□□□ -0.3
SCARF1-202ENST00000348987 WFDC9Q8NEX5 89 aa13.18□□□□□ -0.3
SCARF1-202ENST00000348987 NOTCH2Q04721 2471 aa13.18□□□□□ -0.3
SCARF1-202ENST00000348987 LINC00158P58513 81 aa13.17□□□□□ -0.3
SCARF1-202ENST00000348987 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
SCARF1-202ENST00000348987 RPL36AP83881 106 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms