RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PRO1854Q9UHT4 67 aa14.24□□□□□ -0.13
CHRNA3-202ENST00000348639 F5H768 121 aa14.24□□□□□ -0.13
CHRNA3-202ENST00000348639 OCIAD2Q56VL3 154 aa14.24□□□□□ -0.13
CHRNA3-202ENST00000348639 ADAMTSL4-AS1Q5T5F5 129 aa14.24□□□□□ -0.13
CHRNA3-202ENST00000348639 MIFP14174 115 aa14.23□□□□□ -0.13
CHRNA3-202ENST00000348639 IGLV4-60A0A075B6I1 120 aa14.22□□□□□ -0.13
CHRNA3-202ENST00000348639 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.22□□□□□ -0.13
CHRNA3-202ENST00000348639 A0A0B4J2C4 111 aa14.22□□□□□ -0.13
CHRNA3-202ENST00000348639 MIAQ16674 131 aa14.22□□□□□ -0.13
CHRNA3-202ENST00000348639 Q8NAQ8 132 aa14.22□□□□□ -0.13
CHRNA3-202ENST00000348639 H3BMG7 143 aa14.21□□□□□ -0.13
CHRNA3-202ENST00000348639 PRSS2P07478 247 aa14.21□□□□□ -0.13
CHRNA3-202ENST00000348639 PAX4O43316 350 aa14.2□□□□□ -0.14
CHRNA3-202ENST00000348639 EIF4EBP3O60516 100 aaPredicted RBP14.2□□□□□ -0.14
CHRNA3-202ENST00000348639 RNF183Q96D59 192 aa14.2□□□□□ -0.14
CHRNA3-202ENST00000348639 F8W1H4 67 aa14.19□□□□□ -0.14
CHRNA3-202ENST00000348639 DAD1P61803 113 aa14.19□□□□□ -0.14
CHRNA3-202ENST00000348639 Q9H8V8 135 aa14.19□□□□□ -0.14
CHRNA3-202ENST00000348639 LOC107984156A0A0G2JMH3 177 aa14.19□□□□□ -0.14
CHRNA3-202ENST00000348639 LYRM7Q5U5X0 104 aa14.19□□□□□ -0.14
CHRNA3-202ENST00000348639 ARL17AQ8IVW1 177 aa14.19□□□□□ -0.14
CHRNA3-202ENST00000348639 IGHV3-33P01772 117 aa14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 CIRBPQ14011 172 aaKnown RBP14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 A0A096LPF7 62 aa14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 IFITM1P13164 125 aa14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 SFTA2Q6UW10 78 aa14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 ZNF625Q96I27 306 aaPredicted RBP14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 CELA1Q9UNI1 258 aa14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 STAB1Q9NY15 2570 aa14.17□□□□□ -0.14
CHRNA3-202ENST00000348639 KRTAP10-11P60412 298 aa14.16□□□□□ -0.14
CHRNA3-202ENST00000348639 RBX1P62877 108 aa14.16□□□□□ -0.14
CHRNA3-202ENST00000348639 IGKV3OR2-268A0A0C4DH90 116 aa14.15□□□□□ -0.14
CHRNA3-202ENST00000348639 A0A1B0GUV1 79 aa14.15□□□□□ -0.14
CHRNA3-202ENST00000348639 K7ERU9 68 aa14.15□□□□□ -0.14
CHRNA3-202ENST00000348639 ERG28Q9UKR5 140 aa14.15□□□□□ -0.14
CHRNA3-202ENST00000348639 ATP5G1P05496 136 aa14.15□□□□□ -0.14
CHRNA3-202ENST00000348639 SPART-AS1P0CW21 52 aa14.15□□□□□ -0.14
CHRNA3-202ENST00000348639 SHISA2Q6UWI4 295 aa14.14□□□□□ -0.15
CHRNA3-202ENST00000348639 PRIMA1Q86XR5 153 aa14.14□□□□□ -0.15
CHRNA3-202ENST00000348639 IGHV3OR16-9A0A0B4J2B5 98 aa14.14□□□□□ -0.15
CHRNA3-202ENST00000348639 HERV-K104P63124 156 aa14.14□□□□□ -0.15
CHRNA3-202ENST00000348639 PRO0461Q9UI25 63 aa14.14□□□□□ -0.15
CHRNA3-202ENST00000348639 TMEM262E9PQX1 116 aa14.13□□□□□ -0.15
CHRNA3-202ENST00000348639 PKD1L1Q8TDX9 2849 aa14.12□□□□□ -0.15
CHRNA3-202ENST00000348639 TRBV20-1A0A075B6N2 111 aa14.12□□□□□ -0.15
CHRNA3-202ENST00000348639 PSMB2P49721 201 aa14.12□□□□□ -0.15
CHRNA3-202ENST00000348639 WFDC2Q14508 124 aa14.12□□□□□ -0.15
CHRNA3-202ENST00000348639 LINC00959A0A1B0GUT2 108 aa14.12□□□□□ -0.15
CHRNA3-202ENST00000348639 NPC2P61916 151 aa14.12□□□□□ -0.15
CHRNA3-202ENST00000348639 DAND5Q8N907 189 aa14.12□□□□□ -0.15
CHRNA3-202ENST00000348639 TRAV26-1A0A087WT03 109 aa14.1□□□□□ -0.15
CHRNA3-202ENST00000348639 A0A087WZ39 114 aa14.1□□□□□ -0.15
CHRNA3-202ENST00000348639 HTN3P15516 51 aa14.1□□□□□ -0.15
CHRNA3-202ENST00000348639 COX7B2Q8TF08 81 aa14.1□□□□□ -0.15
CHRNA3-202ENST00000348639 TCL1BO95988 128 aa14.09□□□□□ -0.15
CHRNA3-202ENST00000348639 SCGB1C2P0DMR2 95 aa14.09□□□□□ -0.15
CHRNA3-202ENST00000348639 H7C2G1 150 aa14.08□□□□□ -0.15
CHRNA3-202ENST00000348639 EGFEM1PQ0D2K5 195 aa14.08□□□□□ -0.15
CHRNA3-202ENST00000348639 LINC00308Q8TCZ7 52 aa14.08□□□□□ -0.15
CHRNA3-202ENST00000348639 RNF151Q2KHN1 245 aa14.08□□□□□ -0.16
CHRNA3-202ENST00000348639 MEIG1Q5JSS6 88 aa14.08□□□□□ -0.16
CHRNA3-202ENST00000348639 COPS9Q8WXC6 57 aa14.08□□□□□ -0.16
CHRNA3-202ENST00000348639 Q1RN00 199 aa14.07□□□□□ -0.16
CHRNA3-202ENST00000348639 MTURNQ8N3F0 131 aa14.07□□□□□ -0.16
CHRNA3-202ENST00000348639 TEX48A0A1B0GUV7 120 aa14.06□□□□□ -0.16
CHRNA3-202ENST00000348639 G3V4G9 280 aa14.06□□□□□ -0.16
CHRNA3-202ENST00000348639 SS18Q15532 418 aa14.06□□□□□ -0.16
CHRNA3-202ENST00000348639 RETNQ9HD89 108 aa14.06□□□□□ -0.16
CHRNA3-202ENST00000348639 TRBV30A0A0K0K1B3 111 aa14.05□□□□□ -0.16
CHRNA3-202ENST00000348639 A0A0U1RRA0 63 aa14.05□□□□□ -0.16
CHRNA3-202ENST00000348639 MRPL23Q16540 153 aaKnown RBP14.05□□□□□ -0.16
CHRNA3-202ENST00000348639 CBY1Q9Y3M2 126 aa14.05□□□□□ -0.16
CHRNA3-202ENST00000348639 C5orf38Q86SI9 138 aa14.05□□□□□ -0.16
CHRNA3-202ENST00000348639 TOMM7Q9P0U1 55 aa14.05□□□□□ -0.16
CHRNA3-202ENST00000348639 CMYA5Q8N3K9 4069 aa14.04□□□□□ -0.16
CHRNA3-202ENST00000348639 ANK2Q01484 3957 aa14.04□□□□□ -0.16
CHRNA3-202ENST00000348639 SH2D6Q7Z4S9 175 aa14.03□□□□□ -0.16
CHRNA3-202ENST00000348639 PPDPFQ9H3Y8 114 aa14.03□□□□□ -0.16
CHRNA3-202ENST00000348639 ETDBQ3ZM63 59 aa14.03□□□□□ -0.16
CHRNA3-202ENST00000348639 XCL1P47992 114 aa14.02□□□□□ -0.16
CHRNA3-202ENST00000348639 SMCPP49901 116 aaPredicted RBP14.02□□□□□ -0.16
CHRNA3-202ENST00000348639 SOSTDC1Q6X4U4 206 aa14.02□□□□□ -0.16
CHRNA3-202ENST00000348639 ICOSQ9Y6W8 199 aa14.02□□□□□ -0.16
CHRNA3-202ENST00000348639 TRIAP1O43715 76 aa14.01□□□□□ -0.17
CHRNA3-202ENST00000348639 VPS25Q9BRG1 176 aa14.01□□□□□ -0.17
CHRNA3-202ENST00000348639 CLPSL2Q6UWE3 100 aa14□□□□□ -0.17
CHRNA3-202ENST00000348639 LINC00269Q8N2A0 174 aa14□□□□□ -0.17
CHRNA3-202ENST00000348639 COL6A5A8TX70 2615 aa14□□□□□ -0.17
CHRNA3-202ENST00000348639 LINC01561Q8N1V8 128 aa14□□□□□ -0.17
CHRNA3-202ENST00000348639 RPL13AP40429 203 aaKnown RBP13.99□□□□□ -0.17
CHRNA3-202ENST00000348639 LELP1Q5T871 98 aa13.99□□□□□ -0.17
CHRNA3-202ENST00000348639 ANGP03950 147 aaKnown RBP13.97□□□□□ -0.17
CHRNA3-202ENST00000348639 ATXN8Q156A1 80 aa13.97□□□□□ -0.17
CHRNA3-202ENST00000348639 Q8N3U1 123 aa13.97□□□□□ -0.17
CHRNA3-202ENST00000348639 IBA57-AS1B1ANH7 110 aa13.96□□□□□ -0.17
CHRNA3-202ENST00000348639 COX6CP09669 75 aa13.96□□□□□ -0.17
CHRNA3-202ENST00000348639 REG3AQ06141 175 aa13.96□□□□□ -0.17
CHRNA3-202ENST00000348639 CD164L2Q6UWJ8 174 aa13.96□□□□□ -0.17
CHRNA3-202ENST00000348639 C6orf226Q5I0X4 101 aa13.95□□□□□ -0.18
CHRNA3-202ENST00000348639 MIR7-3HGQ8N6C7 128 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms