RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 IFITM1P13164 125 aa15.24■□□□□ 0.03
PTPN18-202ENST00000347849 LINC00482Q8N8I6 264 aa15.23■□□□□ 0.03
PTPN18-202ENST00000347849 SPANXA1Q9NS26 97 aa15.23■□□□□ 0.03
PTPN18-202ENST00000347849 PF4P02776 101 aa15.22■□□□□ 0.03
PTPN18-202ENST00000347849 CDKN2A-AS1Q9UH64 79 aa15.22■□□□□ 0.03
PTPN18-202ENST00000347849 TRRAPQ9Y4A5 3859 aa15.22■□□□□ 0.03
PTPN18-202ENST00000347849 H3BT86 120 aa15.21■□□□□ 0.03
PTPN18-202ENST00000347849 LST1O00453 97 aa15.21■□□□□ 0.02
PTPN18-202ENST00000347849 ATRQ13535 2644 aa15.19■□□□□ 0.02
PTPN18-202ENST00000347849 CCDC179H3BU77 68 aa15.19■□□□□ 0.02
PTPN18-202ENST00000347849 Q6Q795 121 aa15.19■□□□□ 0.02
PTPN18-202ENST00000347849 IL17DQ8TAD2 202 aa15.19■□□□□ 0.02
PTPN18-202ENST00000347849 GAGE12JA6NER3 117 aa15.18■□□□□ 0.02
PTPN18-202ENST00000347849 GAGE7O76087 117 aa15.18■□□□□ 0.02
PTPN18-202ENST00000347849 GAGE12FP0CL80 117 aa15.18■□□□□ 0.02
PTPN18-202ENST00000347849 GAGE12GP0CL81 117 aa15.18■□□□□ 0.02
PTPN18-202ENST00000347849 GAGE12IP0CL82 117 aa15.18■□□□□ 0.02
PTPN18-202ENST00000347849 GAGE4Q13068 117 aa15.18■□□□□ 0.02
PTPN18-202ENST00000347849 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.18■□□□□ 0.02
PTPN18-202ENST00000347849 TMEM101Q96IK0 257 aa15.18■□□□□ 0.02
PTPN18-202ENST00000347849 TRGV1A0A0A0MS02 117 aa15.17■□□□□ 0.02
PTPN18-202ENST00000347849 A0A0U1RRA0 63 aa15.17■□□□□ 0.02
PTPN18-202ENST00000347849 PIK3CD-AS1Q5SR53 167 aa15.17■□□□□ 0.02
PTPN18-202ENST00000347849 Q6ZTI0 123 aa15.17■□□□□ 0.02
PTPN18-202ENST00000347849 ZNF625Q96I27 306 aaPredicted RBP15.17■□□□□ 0.02
PTPN18-202ENST00000347849 RS1O15537 224 aa15.16■□□□□ 0.02
PTPN18-202ENST00000347849 COX6A2Q02221 97 aa15.16■□□□□ 0.02
PTPN18-202ENST00000347849 DGAT2L7PQ6IED9 249 aa15.16■□□□□ 0.02
PTPN18-202ENST00000347849 TIMM17BO60830 172 aa15.16■□□□□ 0.02
PTPN18-202ENST00000347849 CSNK1G2-AS1Q8NCQ2 148 aa15.15■□□□□ 0.02
PTPN18-202ENST00000347849 FAM110AQ9BQ89 295 aa15.15■□□□□ 0.02
PTPN18-202ENST00000347849 IGHV3-53P01767 116 aa15.15■□□□□ 0.02
PTPN18-202ENST00000347849 CMC4P56277 68 aaPredicted RBP15.15■□□□□ 0.02
PTPN18-202ENST00000347849 CIRBPQ14011 172 aaKnown RBP15.15■□□□□ 0.02
PTPN18-202ENST00000347849 NDUFA1O15239 70 aa15.14■□□□□ 0.01
PTPN18-202ENST00000347849 PLAC8L1A1L4L8 177 aa15.14■□□□□ 0.01
PTPN18-202ENST00000347849 NOP10Q9NPE3 64 aaKnown RBP15.14■□□□□ 0.01
PTPN18-202ENST00000347849 F8P00451 2351 aa15.13■□□□□ 0.01
PTPN18-202ENST00000347849 Q9H8V8 135 aa15.13■□□□□ 0.01
PTPN18-202ENST00000347849 TIRAPP58753 221 aa15.12■□□□□ 0.01
PTPN18-202ENST00000347849 TEP1Q99973 2627 aaKnown RBP15.12■□□□□ 0.01
PTPN18-202ENST00000347849 LINC00308Q8TCZ7 52 aa15.12■□□□□ 0.01
PTPN18-202ENST00000347849 DEFB121Q5J5C9 76 aa15.11■□□□□ 0.01
PTPN18-202ENST00000347849 NBEAL2Q6ZNJ1 2754 aa15.11■□□□□ 0.01
PTPN18-202ENST00000347849 DNAJC30Q96LL9 226 aa15.11■□□□□ 0.01
PTPN18-202ENST00000347849 IGLV5-45A0A087WSX0 123 aa15.1■□□□□ 0.01
PTPN18-202ENST00000347849 FAM240AA0A1B0GVK7 77 aa15.08■□□□□ 0.01
PTPN18-202ENST00000347849 MRPL23Q16540 153 aaKnown RBP15.08■□□□□ 0.01
PTPN18-202ENST00000347849 LINC00242Q5T6M2 205 aa15.08■□□□□ 0.01
PTPN18-202ENST00000347849 LINC00694P0DN24 101 aa15.06■□□□□ 0
PTPN18-202ENST00000347849 HERVK_113P63121 156 aa15.06■□□□□ 0
PTPN18-202ENST00000347849 SOSTDC1Q6X4U4 206 aa15.06■□□□□ 0
PTPN18-202ENST00000347849 TRAV13-1A0A0B4J241 112 aa15.05■□□□□ 0
PTPN18-202ENST00000347849 IGLV5-39A0A0G2JS06 123 aa15.05■□□□□ 0
PTPN18-202ENST00000347849 CHCHD5Q9BSY4 110 aa15.05■□□□□ 0
PTPN18-202ENST00000347849 DAZ2Q13117 558 aaKnown RBP15.05■□□□□ -0
PTPN18-202ENST00000347849 SHISA2Q6UWI4 295 aa15.05■□□□□ -0
PTPN18-202ENST00000347849 COX7A2LO14548 114 aa15.04■□□□□ -0
PTPN18-202ENST00000347849 MEIG1Q5JSS6 88 aa15.04■□□□□ -0
PTPN18-202ENST00000347849 C16orf74Q96GX8 76 aa15.04■□□□□ -0
PTPN18-202ENST00000347849 SMIM1B2RUZ4 78 aa15.02■□□□□ -0
PTPN18-202ENST00000347849 PRIMA1Q86XR5 153 aa15.02■□□□□ -0
PTPN18-202ENST00000347849 TRGV2A0A075B6R0 118 aa15□□□□□ -0.01
PTPN18-202ENST00000347849 C9orf66Q5T8R8 295 aa15□□□□□ -0.01
PTPN18-202ENST00000347849 LOC100131303A0A0U1RQF7 123 aa15□□□□□ -0.01
PTPN18-202ENST00000347849 TRBV7-7A0A0K0K1E9 115 aa14.99□□□□□ -0.01
PTPN18-202ENST00000347849 K7EQD1 137 aa14.99□□□□□ -0.01
PTPN18-202ENST00000347849 OVOL2Q9BRP0 275 aa14.99□□□□□ -0.01
PTPN18-202ENST00000347849 FBN1P35555 2871 aaKnown RBP14.98□□□□□ -0.01
PTPN18-202ENST00000347849 NTM-AS1Q6ZSK4 140 aa14.98□□□□□ -0.01
PTPN18-202ENST00000347849 DAZ4Q86SG3 579 aaKnown RBP14.98□□□□□ -0.01
PTPN18-202ENST00000347849 DAZ3Q9NR90 486 aaKnown RBP14.98□□□□□ -0.01
PTPN18-202ENST00000347849 ACYP1P07311 99 aa14.97□□□□□ -0.01
PTPN18-202ENST00000347849 BAALC-AS2P0C853 105 aa14.97□□□□□ -0.01
PTPN18-202ENST00000347849 COPS9Q8WXC6 57 aa14.97□□□□□ -0.01
PTPN18-202ENST00000347849 RPL36AP83881 106 aaKnown RBP14.95□□□□□ -0.02
PTPN18-202ENST00000347849 SMCR5Q8TEV8 140 aa14.95□□□□□ -0.02
PTPN18-202ENST00000347849 RPL36ALQ969Q0 106 aaKnown RBP14.95□□□□□ -0.02
PTPN18-202ENST00000347849 FAM218AQ96MZ4 157 aa14.95□□□□□ -0.02
PTPN18-202ENST00000347849 FAM19A3Q7Z5A8 133 aa14.94□□□□□ -0.02
PTPN18-202ENST00000347849 C3orf56Q8N813 242 aa14.94□□□□□ -0.02
PTPN18-202ENST00000347849 CDC42SE2Q9NRR3 84 aa14.94□□□□□ -0.02
PTPN18-202ENST00000347849 X6R8D5 127 aa14.94□□□□□ -0.02
PTPN18-202ENST00000347849 F5H768 121 aa14.94□□□□□ -0.02
PTPN18-202ENST00000347849 FAM236AA0A1B0GUQ0 79 aa14.93□□□□□ -0.02
PTPN18-202ENST00000347849 FAM236BA0A1B0GV22 79 aa14.93□□□□□ -0.02
PTPN18-202ENST00000347849 SMIM20Q8N5G0 67 aa14.93□□□□□ -0.02
PTPN18-202ENST00000347849 CSDC2Q9Y534 153 aaKnown RBP14.93□□□□□ -0.02
PTPN18-202ENST00000347849 TRBV10-1A0A0K0K1A3 114 aa14.93□□□□□ -0.02
PTPN18-202ENST00000347849 TRACP01848 142 aa14.93□□□□□ -0.02
PTPN18-202ENST00000347849 DEFB130BP0DP73 79 aa14.93□□□□□ -0.02
PTPN18-202ENST00000347849 DEFB130AP0DP74 79 aa14.93□□□□□ -0.02
PTPN18-202ENST00000347849 HERV-K104P63124 156 aa14.92□□□□□ -0.02
PTPN18-202ENST00000347849 FHL2Q14192 279 aa14.91□□□□□ -0.02
PTPN18-202ENST00000347849 Q9HAA7 133 aa14.91□□□□□ -0.02
PTPN18-202ENST00000347849 C22orf24Q9Y442 160 aa14.91□□□□□ -0.02
PTPN18-202ENST00000347849 TRGV4A0A0C4DH28 118 aa14.9□□□□□ -0.02
PTPN18-202ENST00000347849 CYSRT1A8MQ03 144 aa14.9□□□□□ -0.02
PTPN18-202ENST00000347849 IMUPQ9GZP8 106 aa14.9□□□□□ -0.02
PTPN18-202ENST00000347849 DEFB4AO15263 64 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms