RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PTPRBP23467 1997 aa7.99□□□□□ -1.13
CLCN6-202ENST00000346436 A8MZ25 164 aa7.98□□□□□ -1.13
CLCN6-202ENST00000346436 AVPP01185 164 aa7.98□□□□□ -1.13
CLCN6-202ENST00000346436 CRYBA4P53673 196 aa7.98□□□□□ -1.13
CLCN6-202ENST00000346436 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
CLCN6-202ENST00000346436 Q6ZUT4 128 aa7.98□□□□□ -1.13
CLCN6-202ENST00000346436 ZNF580Q9UK33 172 aa7.98□□□□□ -1.13
CLCN6-202ENST00000346436 EYSQ5T1H1 3165 aa7.98□□□□□ -1.13
CLCN6-202ENST00000346436 JMJD7-PLA2G4BH0Y9G9 81 aa7.97□□□□□ -1.13
CLCN6-202ENST00000346436 LECT2O14960 151 aa7.97□□□□□ -1.13
CLCN6-202ENST00000346436 CASC2Q6XLA1 102 aa7.97□□□□□ -1.13
CLCN6-202ENST00000346436 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
CLCN6-202ENST00000346436 MIR7-3HGQ8N6C7 128 aa7.97□□□□□ -1.13
CLCN6-202ENST00000346436 MYO15AQ9UKN7 3530 aa7.97□□□□□ -1.13
CLCN6-202ENST00000346436 BAALC-AS2P0C853 105 aa7.96□□□□□ -1.13
CLCN6-202ENST00000346436 B5MCH6 92 aa7.96□□□□□ -1.14
CLCN6-202ENST00000346436 CFAP126Q5VTH2 177 aa7.96□□□□□ -1.14
CLCN6-202ENST00000346436 LRRK2Q5S007 2527 aa7.96□□□□□ -1.14
CLCN6-202ENST00000346436 SPTBN4Q9H254 2564 aa7.96□□□□□ -1.14
CLCN6-202ENST00000346436 MT-ATP8P03928 68 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 C18orf65Q6ZTR6 163 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 WFDC10AQ9H1F0 79 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 ZNF462Q96JM2 2506 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 TLN2Q9Y4G6 2542 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 A0A096LNI7 61 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 A0A0J9YXY3 114 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 CD164L2Q6UWJ8 174 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 RETNQ9HD89 108 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 M0QY20 66 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 PLAC8L1A1L4L8 177 aa7.95□□□□□ -1.14
CLCN6-202ENST00000346436 ZNF22P17026 224 aaPredicted RBP7.94□□□□□ -1.14
CLCN6-202ENST00000346436 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
CLCN6-202ENST00000346436 SPATA3Q8NHX4 192 aa7.94□□□□□ -1.14
CLCN6-202ENST00000346436 SETD2Q9BYW2 2564 aaPredicted RBP7.94□□□□□ -1.14
CLCN6-202ENST00000346436 LINC00467Q9BRT7 94 aa7.94□□□□□ -1.14
CLCN6-202ENST00000346436 IGLV4-3A0A075B6K6 122 aa7.94□□□□□ -1.14
CLCN6-202ENST00000346436 SPTBN5Q9NRC6 3674 aaKnown RBP7.93□□□□□ -1.14
CLCN6-202ENST00000346436 UPK3BQ9BT76 320 aa7.93□□□□□ -1.14
CLCN6-202ENST00000346436 BRI3O95415 125 aa7.93□□□□□ -1.14
CLCN6-202ENST00000346436 MUC7Q8TAX7 377 aa7.93□□□□□ -1.14
CLCN6-202ENST00000346436 JMJD1CQ15652 2540 aa7.93□□□□□ -1.14
CLCN6-202ENST00000346436 TRBV10-2A0A0K0K1G8 114 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 TEX49A0A1B0GTD5 131 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 TMEM256-PLSCR3K7ERE1 68 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 DHRS4-AS1Q9P1J3 65 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 IGKV4-1P06312 121 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 USP9YO00507 2555 aaPredicted RBP7.92□□□□□ -1.14
CLCN6-202ENST00000346436 KRTAP24-1Q3LI83 254 aa7.92□□□□□ -1.14
CLCN6-202ENST00000346436 USP9XQ93008 2570 aaPredicted RBP7.91□□□□□ -1.14
CLCN6-202ENST00000346436 PIK3CD-AS1Q5SR53 167 aa7.91□□□□□ -1.14
CLCN6-202ENST00000346436 Q6ZTC4 211 aa7.91□□□□□ -1.14
CLCN6-202ENST00000346436 IBA57-AS1B1ANH7 110 aa7.91□□□□□ -1.14
CLCN6-202ENST00000346436 FHL3Q13643 280 aa7.91□□□□□ -1.14
CLCN6-202ENST00000346436 SPANXCQ9NY87 97 aa7.9□□□□□ -1.14
CLCN6-202ENST00000346436 J3QL48 77 aa7.9□□□□□ -1.14
CLCN6-202ENST00000346436 TSHBP01222 138 aa7.9□□□□□ -1.14
CLCN6-202ENST00000346436 DCANP1Q8TF63 244 aa7.9□□□□□ -1.14
CLCN6-202ENST00000346436 ZFYVE26Q68DK2 2539 aa7.9□□□□□ -1.15
CLCN6-202ENST00000346436 CRIP2P52943 208 aaPredicted RBP7.9□□□□□ -1.15
CLCN6-202ENST00000346436 LINC00337Q8N6G1 96 aa7.9□□□□□ -1.15
CLCN6-202ENST00000346436 KLLNB2CW77 178 aa7.89□□□□□ -1.15
CLCN6-202ENST00000346436 M0R378 163 aa7.89□□□□□ -1.15
CLCN6-202ENST00000346436 POLR2KP53803 58 aaKnown RBP7.89□□□□□ -1.15
CLCN6-202ENST00000346436 TRBV27A0A0K0K1C4 114 aa7.89□□□□□ -1.15
CLCN6-202ENST00000346436 F8WDY8 70 aa7.89□□□□□ -1.15
CLCN6-202ENST00000346436 POM121L12Q8N7R1 296 aa7.89□□□□□ -1.15
CLCN6-202ENST00000346436 ACYP1P07311 99 aa7.89□□□□□ -1.15
CLCN6-202ENST00000346436 ODF3L2Q3SX64 289 aa7.89□□□□□ -1.15
CLCN6-202ENST00000346436 TRIAP1O43715 76 aa7.88□□□□□ -1.15
CLCN6-202ENST00000346436 C3orf84H3BNL1 204 aa7.88□□□□□ -1.15
CLCN6-202ENST00000346436 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
CLCN6-202ENST00000346436 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
CLCN6-202ENST00000346436 REV3LO60673 3130 aa7.87□□□□□ -1.15
CLCN6-202ENST00000346436 REG3GQ6UW15 175 aa7.87□□□□□ -1.15
CLCN6-202ENST00000346436 SPINK6Q6UWN8 80 aa7.87□□□□□ -1.15
CLCN6-202ENST00000346436 MDFIQ99750 246 aa7.87□□□□□ -1.15
CLCN6-202ENST00000346436 XAGE1AQ9HD64 81 aa7.87□□□□□ -1.15
CLCN6-202ENST00000346436 AGRNO00468 2067 aa7.87□□□□□ -1.15
CLCN6-202ENST00000346436 IGIPA6NJ69 53 aa7.86□□□□□ -1.15
CLCN6-202ENST00000346436 FRYLO94915 3013 aa7.86□□□□□ -1.15
CLCN6-202ENST00000346436 MGAQ8IWI9 3026 aa7.86□□□□□ -1.15
CLCN6-202ENST00000346436 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
CLCN6-202ENST00000346436 IGKV3D-7A0A0C4DH55 119 aa7.86□□□□□ -1.15
CLCN6-202ENST00000346436 COX8CQ7Z4L0 72 aa7.86□□□□□ -1.15
CLCN6-202ENST00000346436 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
CLCN6-202ENST00000346436 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
CLCN6-202ENST00000346436 POLQO75417 2590 aa7.85□□□□□ -1.15
CLCN6-202ENST00000346436 FAM236AA0A1B0GUQ0 79 aa7.85□□□□□ -1.15
CLCN6-202ENST00000346436 FAM236BA0A1B0GV22 79 aa7.85□□□□□ -1.15
CLCN6-202ENST00000346436 M0QXV9 152 aa7.85□□□□□ -1.15
CLCN6-202ENST00000346436 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
CLCN6-202ENST00000346436 TMEM258P61165 79 aa7.84□□□□□ -1.15
CLCN6-202ENST00000346436 PPDPFQ9H3Y8 114 aa7.84□□□□□ -1.15
CLCN6-202ENST00000346436 TRBV6-5A0A0K0K1A5 114 aa7.84□□□□□ -1.15
CLCN6-202ENST00000346436 C6orf223Q8N319 242 aa7.84□□□□□ -1.15
CLCN6-202ENST00000346436 C16orf90A8MZG2 172 aa7.84□□□□□ -1.16
CLCN6-202ENST00000346436 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 USP34Q70CQ2 3546 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms