RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 IGHV1-58A0A0C4DH39 117 aa11.36□□□□□ -0.59
CLCN2-202ENST00000344937 COX6CP09669 75 aa11.36□□□□□ -0.59
CLCN2-202ENST00000344937 RPS28P62857 69 aaKnown RBP11.36□□□□□ -0.59
CLCN2-202ENST00000344937 UBE2E2Q96LR5 201 aa11.36□□□□□ -0.59
CLCN2-202ENST00000344937 LITAFQ99732 161 aa11.36□□□□□ -0.59
CLCN2-202ENST00000344937 C2orf48Q96LS8 159 aa11.35□□□□□ -0.59
CLCN2-202ENST00000344937 DNAJC9-AS1A6NH13 148 aa11.35□□□□□ -0.59
CLCN2-202ENST00000344937 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
CLCN2-202ENST00000344937 hADV29S1A0JD25 119 aa11.34□□□□□ -0.59
CLCN2-202ENST00000344937 XCL2Q9UBD3 114 aa11.34□□□□□ -0.59
CLCN2-202ENST00000344937 LINC00643Q86TS7 51 aa11.34□□□□□ -0.59
CLCN2-202ENST00000344937 VSIG2Q96IQ7 327 aa11.34□□□□□ -0.59
CLCN2-202ENST00000344937 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
CLCN2-202ENST00000344937 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.34□□□□□ -0.59
CLCN2-202ENST00000344937 KIR2DL5BQ8NHK3 375 aa11.34□□□□□ -0.59
CLCN2-202ENST00000344937 ACYP1P07311 99 aa11.33□□□□□ -0.6
CLCN2-202ENST00000344937 CRYGAP11844 174 aa11.33□□□□□ -0.6
CLCN2-202ENST00000344937 RBMY1BA6NDE4 496 aaKnown RBP11.33□□□□□ -0.6
CLCN2-202ENST00000344937 RBMY1EA6NEQ0 496 aaKnown RBP11.33□□□□□ -0.6
CLCN2-202ENST00000344937 RBMY1DP0C7P1 496 aaKnown RBP11.33□□□□□ -0.6
CLCN2-202ENST00000344937 MRPS36P82909 103 aaKnown RBP11.33□□□□□ -0.6
CLCN2-202ENST00000344937 COX6A2Q02221 97 aa11.32□□□□□ -0.6
CLCN2-202ENST00000344937 TMEM61Q8N0U2 210 aa11.32□□□□□ -0.6
CLCN2-202ENST00000344937 Q9H8V8 135 aa11.32□□□□□ -0.6
CLCN2-202ENST00000344937 ATP5G1P05496 136 aa11.32□□□□□ -0.6
CLCN2-202ENST00000344937 MIAQ16674 131 aa11.31□□□□□ -0.6
CLCN2-202ENST00000344937 CHCHD7Q9BUK0 85 aa11.31□□□□□ -0.6
CLCN2-202ENST00000344937 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
CLCN2-202ENST00000344937 OXTP01178 125 aa11.31□□□□□ -0.6
CLCN2-202ENST00000344937 HIVEP1P15822 2718 aa11.31□□□□□ -0.6
CLCN2-202ENST00000344937 C4orf26Q17RF5 130 aa11.3□□□□□ -0.6
CLCN2-202ENST00000344937 C5orf38Q86SI9 138 aa11.3□□□□□ -0.6
CLCN2-202ENST00000344937 TMEM89A2RUT3 159 aa11.3□□□□□ -0.6
CLCN2-202ENST00000344937 Q8N2B8 174 aa11.3□□□□□ -0.6
CLCN2-202ENST00000344937 F5H768 121 aa11.29□□□□□ -0.6
CLCN2-202ENST00000344937 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
CLCN2-202ENST00000344937 A0A1W2PRX2 142 aa11.29□□□□□ -0.6
CLCN2-202ENST00000344937 DPH3Q96FX2 82 aa11.29□□□□□ -0.6
CLCN2-202ENST00000344937 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
CLCN2-202ENST00000344937 DYNLRB2Q8TF09 96 aa11.28□□□□□ -0.6
CLCN2-202ENST00000344937 SDIM1Q6ZPB5 146 aa11.28□□□□□ -0.6
CLCN2-202ENST00000344937 TRACP01848 142 aa11.27□□□□□ -0.61
CLCN2-202ENST00000344937 HRCT1Q6UXD1 115 aa11.27□□□□□ -0.61
CLCN2-202ENST00000344937 DSCR8Q96T75 97 aa11.27□□□□□ -0.61
CLCN2-202ENST00000344937 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.61
CLCN2-202ENST00000344937 RNF152Q8N8N0 203 aa11.26□□□□□ -0.61
CLCN2-202ENST00000344937 TINCRA0A1B0GVN0 87 aa11.26□□□□□ -0.61
CLCN2-202ENST00000344937 CXCL5P42830 114 aa11.26□□□□□ -0.61
CLCN2-202ENST00000344937 ZNF415Q09FC8 603 aa11.26□□□□□ -0.61
CLCN2-202ENST00000344937 PYGO1Q9Y3Y4 419 aa11.26□□□□□ -0.61
CLCN2-202ENST00000344937 PRIMA1Q86XR5 153 aa11.26□□□□□ -0.61
CLCN2-202ENST00000344937 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
CLCN2-202ENST00000344937 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
CLCN2-202ENST00000344937 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
CLCN2-202ENST00000344937 RS1O15537 224 aa11.25□□□□□ -0.61
CLCN2-202ENST00000344937 CIRBPQ14011 172 aaKnown RBP11.25□□□□□ -0.61
CLCN2-202ENST00000344937 TMEM86BQ8N661 226 aa11.25□□□□□ -0.61
CLCN2-202ENST00000344937 SPANXCQ9NY87 97 aa11.24□□□□□ -0.61
CLCN2-202ENST00000344937 CITED2Q99967 270 aaPredicted RBP11.24□□□□□ -0.61
CLCN2-202ENST00000344937 ATOX1O00244 68 aa11.24□□□□□ -0.61
CLCN2-202ENST00000344937 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
CLCN2-202ENST00000344937 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
CLCN2-202ENST00000344937 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
CLCN2-202ENST00000344937 Q5XG85 94 aa11.23□□□□□ -0.61
CLCN2-202ENST00000344937 Q9HAA7 133 aa11.23□□□□□ -0.61
CLCN2-202ENST00000344937 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
CLCN2-202ENST00000344937 PEMTQ9UBM1 199 aa11.22□□□□□ -0.61
CLCN2-202ENST00000344937 LY6G6DO95868 133 aa11.22□□□□□ -0.61
CLCN2-202ENST00000344937 TMEM258P61165 79 aa11.22□□□□□ -0.61
CLCN2-202ENST00000344937 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
CLCN2-202ENST00000344937 MAP6D1Q9H9H5 199 aa11.21□□□□□ -0.61
CLCN2-202ENST00000344937 LINC00242Q5T6M2 205 aa11.21□□□□□ -0.62
CLCN2-202ENST00000344937 TIRAPP58753 221 aa11.2□□□□□ -0.62
CLCN2-202ENST00000344937 LINC01006Q8NI28 216 aa11.2□□□□□ -0.62
CLCN2-202ENST00000344937 C4orf3Q8WVX3 66 aa11.2□□□□□ -0.62
CLCN2-202ENST00000344937 Q6ZTI0 123 aa11.2□□□□□ -0.62
CLCN2-202ENST00000344937 C11orf68Q9H3H3 251 aaKnown RBP11.2□□□□□ -0.62
CLCN2-202ENST00000344937 C22orf24Q9Y442 160 aa11.19□□□□□ -0.62
CLCN2-202ENST00000344937 UPK3BQ9BT76 320 aa11.19□□□□□ -0.62
CLCN2-202ENST00000344937 INSP01308 110 aa11.18□□□□□ -0.62
CLCN2-202ENST00000344937 RPL18AQ02543 176 aaKnown RBP11.18□□□□□ -0.62
CLCN2-202ENST00000344937 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
CLCN2-202ENST00000344937 VWFP04275 2813 aa11.18□□□□□ -0.62
CLCN2-202ENST00000344937 TENM1Q9UKZ4 2725 aa11.18□□□□□ -0.62
CLCN2-202ENST00000344937 NDUFA1O15239 70 aa11.18□□□□□ -0.62
CLCN2-202ENST00000344937 LOC100131303A0A0U1RQF7 123 aa11.17□□□□□ -0.62
CLCN2-202ENST00000344937 RNASE1P07998 156 aaKnown RBP11.17□□□□□ -0.62
CLCN2-202ENST00000344937 COX7A2LO14548 114 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 BAALC-AS2P0C853 105 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 STHQ8IWL8 128 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 INAFM1C9JVW0 142 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 FAM218AQ96MZ4 157 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 NOP10Q9NPE3 64 aaKnown RBP11.16□□□□□ -0.62
CLCN2-202ENST00000344937 SMIM1B2RUZ4 78 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 WFDC10AQ9H1F0 79 aa11.16□□□□□ -0.62
CLCN2-202ENST00000344937 F8P00451 2351 aa11.15□□□□□ -0.62
CLCN2-202ENST00000344937 HILS1P60008 231 aa11.15□□□□□ -0.62
CLCN2-202ENST00000344937 NTM-AS1Q6ZSK4 140 aa11.15□□□□□ -0.62
CLCN2-202ENST00000344937 SERP2Q8N6R1 65 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms