RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 Q6ZN92 141 aa13.67□□□□□ -0.22
SMARCB1-202ENST00000344921 FAM104AQ969W3 186 aa13.67□□□□□ -0.22
SMARCB1-202ENST00000344921 TOMM6Q96B49 74 aa13.67□□□□□ -0.22
SMARCB1-202ENST00000344921 AP5S1Q9NUS5 200 aa13.67□□□□□ -0.22
SMARCB1-202ENST00000344921 LINC01546A6NGU7 62 aa13.66□□□□□ -0.22
SMARCB1-202ENST00000344921 LINC00614P0C842 121 aa13.66□□□□□ -0.22
SMARCB1-202ENST00000344921 A0A1B0GV90 55 aa13.65□□□□□ -0.22
SMARCB1-202ENST00000344921 FOXI1Q12951 378 aa13.65□□□□□ -0.22
SMARCB1-202ENST00000344921 CD164L2Q6UWJ8 174 aa13.65□□□□□ -0.22
SMARCB1-202ENST00000344921 BIRC6Q9NR09 4857 aa13.65□□□□□ -0.22
SMARCB1-202ENST00000344921 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
SMARCB1-202ENST00000344921 TEX43Q6ZNM6 134 aa13.64□□□□□ -0.23
SMARCB1-202ENST00000344921 PRSS1P07477 247 aa13.64□□□□□ -0.23
SMARCB1-202ENST00000344921 GCSHP23434 173 aa13.64□□□□□ -0.23
SMARCB1-202ENST00000344921 SCGB3A1Q96QR1 104 aa13.64□□□□□ -0.23
SMARCB1-202ENST00000344921 VCX2Q9H322 139 aa13.64□□□□□ -0.23
SMARCB1-202ENST00000344921 hDV102S1A0JD36 115 aa13.63□□□□□ -0.23
SMARCB1-202ENST00000344921 LINC01549A6NIU2 74 aa13.63□□□□□ -0.23
SMARCB1-202ENST00000344921 IGIPA6NJ69 53 aa13.63□□□□□ -0.23
SMARCB1-202ENST00000344921 NPSP0C0P6 89 aa13.61□□□□□ -0.23
SMARCB1-202ENST00000344921 PAPPA-AS1Q5QFB9 102 aa13.61□□□□□ -0.23
SMARCB1-202ENST00000344921 ERASQ7Z444 233 aa13.61□□□□□ -0.23
SMARCB1-202ENST00000344921 URB1-AS1Q96HZ7 61 aa13.61□□□□□ -0.23
SMARCB1-202ENST00000344921 TIMM17AQ99595 171 aa13.61□□□□□ -0.23
SMARCB1-202ENST00000344921 MALP21145 153 aa13.61□□□□□ -0.23
SMARCB1-202ENST00000344921 DNAH5Q8TE73 4624 aa13.61□□□□□ -0.23
SMARCB1-202ENST00000344921 M0R143 59 aa13.6□□□□□ -0.23
SMARCB1-202ENST00000344921 COX7A2LO14548 114 aa13.6□□□□□ -0.23
SMARCB1-202ENST00000344921 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
SMARCB1-202ENST00000344921 DYNC1H1Q14204 4646 aaKnown RBP13.6□□□□□ -0.23
SMARCB1-202ENST00000344921 SCGB1D1O95968 90 aa13.59□□□□□ -0.23
SMARCB1-202ENST00000344921 C15orf56Q8N910 161 aa13.59□□□□□ -0.23
SMARCB1-202ENST00000344921 PMCHL1Q16048 86 aa13.59□□□□□ -0.23
SMARCB1-202ENST00000344921 HIGD2BQ4VC39 106 aa13.59□□□□□ -0.23
SMARCB1-202ENST00000344921 C5orf38Q86SI9 138 aa13.59□□□□□ -0.23
SMARCB1-202ENST00000344921 BAGE3Q86Y29 109 aa13.59□□□□□ -0.23
SMARCB1-202ENST00000344921 AMELXQ99217 191 aa13.59□□□□□ -0.23
SMARCB1-202ENST00000344921 IGHV1-58A0A0C4DH39 117 aa13.57□□□□□ -0.24
SMARCB1-202ENST00000344921 HBDP02042 147 aa13.57□□□□□ -0.24
SMARCB1-202ENST00000344921 KRTAP10-1P60331 282 aa13.57□□□□□ -0.24
SMARCB1-202ENST00000344921 LINC01620Q4KN68 170 aa13.57□□□□□ -0.24
SMARCB1-202ENST00000344921 LINC00173Q6ZV60 143 aa13.56□□□□□ -0.24
SMARCB1-202ENST00000344921 CHCHD1Q96BP2 118 aaKnown RBP13.56□□□□□ -0.24
SMARCB1-202ENST00000344921 UBE2D1P51668 147 aa13.56□□□□□ -0.24
SMARCB1-202ENST00000344921 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.55□□□□□ -0.24
SMARCB1-202ENST00000344921 LINC00242Q5T6M2 205 aa13.55□□□□□ -0.24
SMARCB1-202ENST00000344921 LRP1BQ9NZR2 4599 aa13.54□□□□□ -0.24
SMARCB1-202ENST00000344921 A0A096LNJ9 63 aa13.54□□□□□ -0.24
SMARCB1-202ENST00000344921 APOMO95445 188 aa13.54□□□□□ -0.24
SMARCB1-202ENST00000344921 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
SMARCB1-202ENST00000344921 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
SMARCB1-202ENST00000344921 IGHV3OR16-9A0A0B4J2B5 98 aa13.53□□□□□ -0.24
SMARCB1-202ENST00000344921 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
SMARCB1-202ENST00000344921 SNHG12Q9BXW3 62 aa13.53□□□□□ -0.24
SMARCB1-202ENST00000344921 HSBP1O75506 76 aa13.53□□□□□ -0.24
SMARCB1-202ENST00000344921 COX6A2Q02221 97 aa13.52□□□□□ -0.25
SMARCB1-202ENST00000344921 MIEN1Q9BRT3 115 aa13.52□□□□□ -0.25
SMARCB1-202ENST00000344921 CNBPP62633 177 aaKnown RBP13.51□□□□□ -0.25
SMARCB1-202ENST00000344921 LINC00526Q96FQ7 95 aa13.51□□□□□ -0.25
SMARCB1-202ENST00000344921 SEC11AP67812 179 aa13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 PMVKQ15126 192 aa13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 NUPR1O60356 82 aa13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 SERF1AO75920 110 aa13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 CDK2AP2O75956 126 aa13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 SLPIP03973 132 aa13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 C9orf163Q8N9P6 203 aa13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 GEMIN7Q9H840 131 aaKnown RBP13.5□□□□□ -0.25
SMARCB1-202ENST00000344921 ATP5LO75964 103 aa13.49□□□□□ -0.25
SMARCB1-202ENST00000344921 LINC00310P59036 64 aa13.49□□□□□ -0.25
SMARCB1-202ENST00000344921 CST9LQ9H4G1 147 aa13.49□□□□□ -0.25
SMARCB1-202ENST00000344921 HERVK_113P63121 156 aa13.48□□□□□ -0.25
SMARCB1-202ENST00000344921 FAM19A2Q8N3H0 131 aa13.48□□□□□ -0.25
SMARCB1-202ENST00000344921 A0A087WZ39 114 aa13.47□□□□□ -0.25
SMARCB1-202ENST00000344921 A0A0J9YXV3 536 aa13.47□□□□□ -0.25
SMARCB1-202ENST00000344921 FAM19A3Q7Z5A8 133 aa13.47□□□□□ -0.25
SMARCB1-202ENST00000344921 ORAOV1Q8WV07 137 aa13.47□□□□□ -0.25
SMARCB1-202ENST00000344921 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
SMARCB1-202ENST00000344921 IGLV4-69A0A075B6H9 119 aa13.47□□□□□ -0.25
SMARCB1-202ENST00000344921 SPAG11BQ08648 103 aa13.46□□□□□ -0.25
SMARCB1-202ENST00000344921 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
SMARCB1-202ENST00000344921 FAM30AQ9NZY2 134 aa13.45□□□□□ -0.26
SMARCB1-202ENST00000344921 CARD19Q96LW7 228 aa13.44□□□□□ -0.26
SMARCB1-202ENST00000344921 CAMK2N2Q96S95 79 aa13.44□□□□□ -0.26
SMARCB1-202ENST00000344921 CDKN2A-AS1Q9UH64 79 aa13.44□□□□□ -0.26
SMARCB1-202ENST00000344921 KIAA1109Q2LD37 5005 aa13.44□□□□□ -0.26
SMARCB1-202ENST00000344921 TINCRA0A1B0GVN0 87 aa13.43□□□□□ -0.26
SMARCB1-202ENST00000344921 SYCNQ0VAF6 134 aa13.43□□□□□ -0.26
SMARCB1-202ENST00000344921 HAMPP81172 84 aa13.42□□□□□ -0.26
SMARCB1-202ENST00000344921 XGP55808 180 aa13.42□□□□□ -0.26
SMARCB1-202ENST00000344921 IFI27L1Q96BM0 104 aa13.42□□□□□ -0.26
SMARCB1-202ENST00000344921 LINC01561Q8N1V8 128 aa13.41□□□□□ -0.26
SMARCB1-202ENST00000344921 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
SMARCB1-202ENST00000344921 LEPROTL1O95214 131 aa13.4□□□□□ -0.26
SMARCB1-202ENST00000344921 SDIM1Q6ZPB5 146 aa13.4□□□□□ -0.26
SMARCB1-202ENST00000344921 APOBP04114 4563 aaKnown RBP13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 Q6ZRU5 148 aa13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 Q6ZSA8 131 aa13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 TOMM7Q9P0U1 55 aa13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 C20orf202A1L168 122 aa13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 DLEU1O43261 78 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms