RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PYGO1Q9Y3Y4 419 aa9.05□□□□□ -0.96
SNRNP48-201ENST00000342415 UBL5Q9BZL1 73 aa9.05□□□□□ -0.96
SNRNP48-201ENST00000342415 ORMDL1Q9P0S3 153 aa9.05□□□□□ -0.96
SNRNP48-201ENST00000342415 MGAM2Q2M2H8 2515 aa9.04□□□□□ -0.96
SNRNP48-201ENST00000342415 KRTAP10-9P60411 292 aa9.04□□□□□ -0.96
SNRNP48-201ENST00000342415 LST1O00453 97 aa9.04□□□□□ -0.96
SNRNP48-201ENST00000342415 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
SNRNP48-201ENST00000342415 NCR3O14931 201 aa9.04□□□□□ -0.96
SNRNP48-201ENST00000342415 Q6YL49 198 aa9.04□□□□□ -0.96
SNRNP48-201ENST00000342415 ZNF702PQ9H963 129 aa9.04□□□□□ -0.96
SNRNP48-201ENST00000342415 DEFB121Q5J5C9 76 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 RNF152Q8N8N0 203 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 ACYP1P07311 99 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 NDUFA1O15239 70 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 DEFB135Q30KP9 77 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 LINC00242Q5T6M2 205 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
SNRNP48-201ENST00000342415 TRAV25A0A0B4J276 109 aa9.02□□□□□ -0.96
SNRNP48-201ENST00000342415 TMEM89A2RUT3 159 aa9.02□□□□□ -0.96
SNRNP48-201ENST00000342415 PLA2G2AP14555 144 aa9.02□□□□□ -0.96
SNRNP48-201ENST00000342415 C16orf74Q96GX8 76 aa9.02□□□□□ -0.96
SNRNP48-201ENST00000342415 MAST4O15021 2626 aa9.02□□□□□ -0.96
SNRNP48-201ENST00000342415 IGHV4-31P0DP07 118 aa9.02□□□□□ -0.97
SNRNP48-201ENST00000342415 ITPR3Q14573 2671 aa9.02□□□□□ -0.97
SNRNP48-201ENST00000342415 RBMY1FQ15415 496 aaKnown RBP9.02□□□□□ -0.97
SNRNP48-201ENST00000342415 ITPR1Q14643 2758 aa9.02□□□□□ -0.97
SNRNP48-201ENST00000342415 LINC01546A6NGU7 62 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 TRACP01848 142 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 DNAJC9-AS1A6NH13 148 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 H0YGX0 51 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 ZNF561-AS1K7EIQ3 104 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 CHCHD7Q9BUK0 85 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 SPANXCQ9NY87 97 aa9.01□□□□□ -0.97
SNRNP48-201ENST00000342415 LINC00643Q86TS7 51 aa9□□□□□ -0.97
SNRNP48-201ENST00000342415 FLNCQ14315 2725 aa9□□□□□ -0.97
SNRNP48-201ENST00000342415 TIRAPP58753 221 aa8.99□□□□□ -0.97
SNRNP48-201ENST00000342415 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
SNRNP48-201ENST00000342415 SPANXDQ9BXN6 97 aa8.99□□□□□ -0.97
SNRNP48-201ENST00000342415 RELNP78509 3460 aa8.99□□□□□ -0.97
SNRNP48-201ENST00000342415 ODF3L2Q3SX64 289 aa8.99□□□□□ -0.97
SNRNP48-201ENST00000342415 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
SNRNP48-201ENST00000342415 CITED1Q99966 193 aa8.98□□□□□ -0.97
SNRNP48-201ENST00000342415 KLK12Q9UKR0 248 aa8.98□□□□□ -0.97
SNRNP48-201ENST00000342415 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
SNRNP48-201ENST00000342415 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
SNRNP48-201ENST00000342415 DSCR8Q96T75 97 aa8.98□□□□□ -0.97
SNRNP48-201ENST00000342415 ZNF575Q86XF7 245 aa8.97□□□□□ -0.97
SNRNP48-201ENST00000342415 AMELXQ99217 191 aa8.97□□□□□ -0.97
SNRNP48-201ENST00000342415 SMIM1B2RUZ4 78 aa8.97□□□□□ -0.97
SNRNP48-201ENST00000342415 TNRC18O15417 2968 aaPredicted RBP8.96□□□□□ -0.97
SNRNP48-201ENST00000342415 PRR3P79522 188 aaKnown RBP8.96□□□□□ -0.97
SNRNP48-201ENST00000342415 NBEAL2Q6ZNJ1 2754 aa8.96□□□□□ -0.98
SNRNP48-201ENST00000342415 RPL18AQ02543 176 aaKnown RBP8.96□□□□□ -0.98
SNRNP48-201ENST00000342415 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
SNRNP48-201ENST00000342415 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
SNRNP48-201ENST00000342415 CDC42SE2Q9NRR3 84 aa8.95□□□□□ -0.98
SNRNP48-201ENST00000342415 TRBV6-8A0A0A6YYG3 113 aa8.95□□□□□ -0.98
SNRNP48-201ENST00000342415 Q8N2B8 174 aa8.95□□□□□ -0.98
SNRNP48-201ENST00000342415 FHL3Q13643 280 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 FAM222AQ5U5X8 452 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 WFDC9Q8NEX5 89 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 ATOX1O00244 68 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 FAM19A4Q96LR4 140 aa8.94□□□□□ -0.98
SNRNP48-201ENST00000342415 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 CCL18P55774 89 aa8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 SPAG11BQ08648 103 aa8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 MRAPQ8TCY5 172 aa8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 TEP1Q99973 2627 aaKnown RBP8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 GCN1Q92616 2671 aaKnown RBP8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 A0A087WVE0 104 aa8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 IGHV4-28A0A0C4DH34 117 aa8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 BBC3Q96PG8 261 aaPredicted RBP8.93□□□□□ -0.98
SNRNP48-201ENST00000342415 EIF4EBP3O60516 100 aaPredicted RBP8.92□□□□□ -0.98
SNRNP48-201ENST00000342415 PRO0255Q9UI72 69 aa8.92□□□□□ -0.98
SNRNP48-201ENST00000342415 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
SNRNP48-201ENST00000342415 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
SNRNP48-201ENST00000342415 TIMM17BO60830 172 aa8.91□□□□□ -0.98
SNRNP48-201ENST00000342415 HIGD2BQ4VC39 106 aa8.91□□□□□ -0.98
SNRNP48-201ENST00000342415 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
SNRNP48-201ENST00000342415 SMR3AQ99954 134 aa8.91□□□□□ -0.98
SNRNP48-201ENST00000342415 HELZ2Q9BYK8 2649 aaKnown RBP8.9□□□□□ -0.98
SNRNP48-201ENST00000342415 IGKV2D-24A0A075B6R9 120 aa8.9□□□□□ -0.98
SNRNP48-201ENST00000342415 GHRHP01286 108 aa8.9□□□□□ -0.98
SNRNP48-201ENST00000342415 C20orf197Q8N268 126 aa8.9□□□□□ -0.98
SNRNP48-201ENST00000342415 CAMK2N2Q96S95 79 aa8.9□□□□□ -0.98
SNRNP48-201ENST00000342415 KLK5Q9Y337 293 aaPredicted RBP8.9□□□□□ -0.98
SNRNP48-201ENST00000342415 CHCHD10Q8WYQ3 142 aaPredicted RBP8.9□□□□□ -0.99
SNRNP48-201ENST00000342415 A0A087WYN8 130 aa8.89□□□□□ -0.99
SNRNP48-201ENST00000342415 ENHOQ6UWT2 76 aa8.89□□□□□ -0.99
SNRNP48-201ENST00000342415 LINC01006Q8NI28 216 aa8.89□□□□□ -0.99
SNRNP48-201ENST00000342415 PRB2P02812 416 aaPredicted RBP8.89□□□□□ -0.99
SNRNP48-201ENST00000342415 RBM3P98179 157 aaKnown RBP8.89□□□□□ -0.99
SNRNP48-201ENST00000342415 REG3AQ06141 175 aa8.89□□□□□ -0.99
SNRNP48-201ENST00000342415 IBA57-AS1B1ANH7 110 aa8.88□□□□□ -0.99
SNRNP48-201ENST00000342415 APOC4P55056 127 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms