RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 LINC00959A0A1B0GUT2 108 aa11.72□□□□□ -0.53
FRMD4A-202ENST00000342409 SEC11AP67812 179 aa11.72□□□□□ -0.53
FRMD4A-202ENST00000342409 BATFQ16520 125 aa11.72□□□□□ -0.53
FRMD4A-202ENST00000342409 ESRGQ1W209 222 aa11.72□□□□□ -0.53
FRMD4A-202ENST00000342409 BVES-AS1Q5T3Y7 98 aa11.72□□□□□ -0.53
FRMD4A-202ENST00000342409 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.54
FRMD4A-202ENST00000342409 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
FRMD4A-202ENST00000342409 CLPSL2Q6UWE3 100 aa11.7□□□□□ -0.54
FRMD4A-202ENST00000342409 IGHV3OR16-9A0A0B4J2B5 98 aa11.69□□□□□ -0.54
FRMD4A-202ENST00000342409 H3BRM9 83 aa11.69□□□□□ -0.54
FRMD4A-202ENST00000342409 LGALS3P17931 250 aaKnown RBP11.69□□□□□ -0.54
FRMD4A-202ENST00000342409 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
FRMD4A-202ENST00000342409 HSD52Q0P140 79 aa11.69□□□□□ -0.54
FRMD4A-202ENST00000342409 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
FRMD4A-202ENST00000342409 ANGP03950 147 aaKnown RBP11.67□□□□□ -0.54
FRMD4A-202ENST00000342409 C10orf126Q8N4M7 172 aa11.67□□□□□ -0.54
FRMD4A-202ENST00000342409 CSMD3Q7Z407 3707 aa11.67□□□□□ -0.54
FRMD4A-202ENST00000342409 DNAH7Q8WXX0 4024 aa11.66□□□□□ -0.54
FRMD4A-202ENST00000342409 LBHQ53QV2 105 aaPredicted RBP11.66□□□□□ -0.54
FRMD4A-202ENST00000342409 CCL25O15444 150 aa11.65□□□□□ -0.54
FRMD4A-202ENST00000342409 REG3AQ06141 175 aa11.65□□□□□ -0.54
FRMD4A-202ENST00000342409 ZFAND6Q6FIF0 208 aa11.65□□□□□ -0.54
FRMD4A-202ENST00000342409 C15orf53Q8NAA6 179 aa11.64□□□□□ -0.55
FRMD4A-202ENST00000342409 PRR34Q9NV39 138 aa11.64□□□□□ -0.55
FRMD4A-202ENST00000342409 A0A087WZ39 114 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 K7EP13 123 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 IGHV3-30P01768 117 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 IGHV3-33P01772 117 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 IGHV3-30-5P0DP03 117 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 XCL1P47992 114 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 SS18Q15532 418 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 SCGB1D4Q6XE38 83 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 A0A0J9YXY3 114 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 FXYD2P54710 66 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 ENHOQ6UWT2 76 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 C5orf38Q86SI9 138 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 KLK12Q9UKR0 248 aa11.63□□□□□ -0.55
FRMD4A-202ENST00000342409 NHLRC4P0CG21 123 aaPredicted RBP11.62□□□□□ -0.55
FRMD4A-202ENST00000342409 TAL2Q16559 108 aa11.62□□□□□ -0.55
FRMD4A-202ENST00000342409 COL5A1-AS1Q5SY13 56 aa11.62□□□□□ -0.55
FRMD4A-202ENST00000342409 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
FRMD4A-202ENST00000342409 CEND1Q8N111 149 aa11.61□□□□□ -0.55
FRMD4A-202ENST00000342409 CHCHD10Q8WYQ3 142 aaPredicted RBP11.61□□□□□ -0.55
FRMD4A-202ENST00000342409 TM2D2Q9BX73 214 aa11.61□□□□□ -0.55
FRMD4A-202ENST00000342409 IGLV10-54A0A075B6I4 117 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 IGLL5B9A064 214 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 NDUFA1O15239 70 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 LITAFQ99732 161 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 GCSHP23434 173 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 HIST1H4GQ99525 98 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 SPANXB1Q9NS25 103 aaPredicted RBP11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 DNAH1Q9P2D7 4330 aa11.6□□□□□ -0.55
FRMD4A-202ENST00000342409 PLECQ15149 4684 aaKnown RBP11.59□□□□□ -0.55
FRMD4A-202ENST00000342409 A0A1B0GV90 55 aa11.59□□□□□ -0.55
FRMD4A-202ENST00000342409 CD164L2Q6UWJ8 174 aa11.59□□□□□ -0.55
FRMD4A-202ENST00000342409 LYSTQ99698 3801 aa11.58□□□□□ -0.55
FRMD4A-202ENST00000342409 FOXI1Q12951 378 aa11.58□□□□□ -0.56
FRMD4A-202ENST00000342409 Q6ZVH6 145 aa11.58□□□□□ -0.56
FRMD4A-202ENST00000342409 LINC01556Q5JQF7 62 aa11.57□□□□□ -0.56
FRMD4A-202ENST00000342409 Q9H8V8 135 aa11.57□□□□□ -0.56
FRMD4A-202ENST00000342409 COX7B2Q8TF08 81 aa11.57□□□□□ -0.56
FRMD4A-202ENST00000342409 TAX1BP3O14907 124 aa11.56□□□□□ -0.56
FRMD4A-202ENST00000342409 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
FRMD4A-202ENST00000342409 LINC01561Q8N1V8 128 aa11.56□□□□□ -0.56
FRMD4A-202ENST00000342409 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
FRMD4A-202ENST00000342409 UBE2WQ96B02 151 aa11.55□□□□□ -0.56
FRMD4A-202ENST00000342409 STARD9Q9P2P6 4700 aa11.55□□□□□ -0.56
FRMD4A-202ENST00000342409 TENM2Q9NT68 2774 aa11.55□□□□□ -0.56
FRMD4A-202ENST00000342409 SRSF9Q13242 221 aaKnown RBP eCLIP11.55□□□□□ -0.56
FRMD4A-202ENST00000342409 KRTAP26-1Q6PEX3 210 aa11.55□□□□□ -0.56
FRMD4A-202ENST00000342409 GAGE12HA6NDE8 117 aa11.54□□□□□ -0.56
FRMD4A-202ENST00000342409 COX7A2LO14548 114 aa11.54□□□□□ -0.56
FRMD4A-202ENST00000342409 TOMM7Q9P0U1 55 aa11.54□□□□□ -0.56
FRMD4A-202ENST00000342409 FBN3Q75N90 2809 aa11.53□□□□□ -0.56
FRMD4A-202ENST00000342409 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
FRMD4A-202ENST00000342409 TIMM17BO60830 172 aa11.52□□□□□ -0.56
FRMD4A-202ENST00000342409 KIAA0087Q14695 138 aa11.52□□□□□ -0.56
FRMD4A-202ENST00000342409 A6NDN8 102 aa11.52□□□□□ -0.57
FRMD4A-202ENST00000342409 TMEM238C9JI98 176 aa11.52□□□□□ -0.57
FRMD4A-202ENST00000342409 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 K7ERJ3 54 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 CRPP02741 224 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 CCL18P55774 89 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 MIAQ16674 131 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 SPANXDQ9BXN6 97 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 NHP2Q9NX24 153 aaKnown RBP11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 SPANXCQ9NY87 97 aa11.51□□□□□ -0.57
FRMD4A-202ENST00000342409 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
FRMD4A-202ENST00000342409 Q8IZM0 81 aa11.5□□□□□ -0.57
FRMD4A-202ENST00000342409 UPK3BQ9BT76 320 aa11.5□□□□□ -0.57
FRMD4A-202ENST00000342409 EIF4EBP3O60516 100 aaPredicted RBP11.49□□□□□ -0.57
FRMD4A-202ENST00000342409 MUSTN1Q8IVN3 82 aa11.49□□□□□ -0.57
FRMD4A-202ENST00000342409 HERV-K104P63124 156 aa11.49□□□□□ -0.57
FRMD4A-202ENST00000342409 DAND5Q8N907 189 aa11.49□□□□□ -0.57
FRMD4A-202ENST00000342409 COX11Q9Y6N1 276 aa11.49□□□□□ -0.57
FRMD4A-202ENST00000342409 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms