RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
COL18A1-201ENST00000342220 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
COL18A1-201ENST00000342220 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
COL18A1-201ENST00000342220 M0R2P5 195 aa9.42□□□□□ -0.9
COL18A1-201ENST00000342220 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
COL18A1-201ENST00000342220 Q6ZSN1 163 aa9.41□□□□□ -0.9
COL18A1-201ENST00000342220 ZNRF2Q8NHG8 242 aa9.41□□□□□ -0.9
COL18A1-201ENST00000342220 A0A0J9YY99 117 aa9.41□□□□□ -0.9
COL18A1-201ENST00000342220 IGHV3-64A0A075B6Q5 118 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 C2orf82Q6UX34 121 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 TMEM141Q96I45 108 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 C9orf85Q96MD7 179 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 TRBV27A0A0K0K1C4 114 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 TIMM17AQ99595 171 aa9.4□□□□□ -0.9
COL18A1-201ENST00000342220 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.91
COL18A1-201ENST00000342220 RETNQ9HD89 108 aa9.4□□□□□ -0.91
COL18A1-201ENST00000342220 ATXN8Q156A1 80 aa9.39□□□□□ -0.91
COL18A1-201ENST00000342220 M0QY20 66 aa9.39□□□□□ -0.91
COL18A1-201ENST00000342220 UQCRQO14949 82 aa9.39□□□□□ -0.91
COL18A1-201ENST00000342220 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
COL18A1-201ENST00000342220 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
COL18A1-201ENST00000342220 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
COL18A1-201ENST00000342220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
COL18A1-201ENST00000342220 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
COL18A1-201ENST00000342220 DGAT2L7PQ6IED9 249 aa9.38□□□□□ -0.91
COL18A1-201ENST00000342220 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
COL18A1-201ENST00000342220 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
COL18A1-201ENST00000342220 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
COL18A1-201ENST00000342220 A0A1B0GX51 115 aa9.37□□□□□ -0.91
COL18A1-201ENST00000342220 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
COL18A1-201ENST00000342220 J3QQQ9 107 aa9.36□□□□□ -0.91
COL18A1-201ENST00000342220 AMELXQ99217 191 aa9.36□□□□□ -0.91
COL18A1-201ENST00000342220 TRBV10-2A0A0K0K1G8 114 aa9.36□□□□□ -0.91
COL18A1-201ENST00000342220 GIG44P09565 113 aaPredicted RBP9.36□□□□□ -0.91
COL18A1-201ENST00000342220 IGHV4-30-4P0DP06 118 aa9.36□□□□□ -0.91
COL18A1-201ENST00000342220 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
COL18A1-201ENST00000342220 LINC00526Q96FQ7 95 aa9.36□□□□□ -0.91
COL18A1-201ENST00000342220 TRBV7-7A0A0K0K1E9 115 aa9.35□□□□□ -0.91
COL18A1-201ENST00000342220 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
COL18A1-201ENST00000342220 LGALS3P17931 250 aaKnown RBP9.35□□□□□ -0.91
COL18A1-201ENST00000342220 SLC25A29Q8N8R3 303 aa9.35□□□□□ -0.91
COL18A1-201ENST00000342220 KIR2DL5BQ8NHK3 375 aa9.35□□□□□ -0.91
COL18A1-201ENST00000342220 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
COL18A1-201ENST00000342220 hADV29S1A0JD25 119 aa9.35□□□□□ -0.91
COL18A1-201ENST00000342220 TENM3Q9P273 2699 aa9.35□□□□□ -0.91
COL18A1-201ENST00000342220 CMC4P56277 68 aaPredicted RBP9.34□□□□□ -0.91
COL18A1-201ENST00000342220 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
COL18A1-201ENST00000342220 C20orf203Q8NBC4 194 aa9.33□□□□□ -0.92
COL18A1-201ENST00000342220 RHOHQ15669 191 aa9.33□□□□□ -0.92
COL18A1-201ENST00000342220 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
COL18A1-201ENST00000342220 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
COL18A1-201ENST00000342220 TMEM223A0PJW6 202 aa9.33□□□□□ -0.92
COL18A1-201ENST00000342220 FAM222AQ5U5X8 452 aa9.33□□□□□ -0.92
COL18A1-201ENST00000342220 I3L3M4 83 aa9.32□□□□□ -0.92
COL18A1-201ENST00000342220 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
COL18A1-201ENST00000342220 IGLV4-3A0A075B6K6 122 aa9.31□□□□□ -0.92
COL18A1-201ENST00000342220 LEPROTO15243 131 aa9.31□□□□□ -0.92
COL18A1-201ENST00000342220 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
COL18A1-201ENST00000342220 H7C423 109 aa9.3□□□□□ -0.92
COL18A1-201ENST00000342220 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
COL18A1-201ENST00000342220 TRIAP1O43715 76 aa9.3□□□□□ -0.92
COL18A1-201ENST00000342220 TRACP01848 142 aa9.3□□□□□ -0.92
COL18A1-201ENST00000342220 COX7CP15954 63 aa9.3□□□□□ -0.92
COL18A1-201ENST00000342220 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
COL18A1-201ENST00000342220 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
COL18A1-201ENST00000342220 RPS28P62857 69 aaKnown RBP9.3□□□□□ -0.92
COL18A1-201ENST00000342220 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
COL18A1-201ENST00000342220 TRAV13-1A0A0B4J241 112 aa9.29□□□□□ -0.92
COL18A1-201ENST00000342220 DAD1P61803 113 aa9.29□□□□□ -0.92
COL18A1-201ENST00000342220 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
COL18A1-201ENST00000342220 CYSTM1Q9H1C7 97 aa9.29□□□□□ -0.92
COL18A1-201ENST00000342220 APOC4P55056 127 aa9.29□□□□□ -0.92
COL18A1-201ENST00000342220 CLEC2BQ92478 149 aa9.29□□□□□ -0.92
COL18A1-201ENST00000342220 STAB2Q8WWQ8 2551 aa9.29□□□□□ -0.92
COL18A1-201ENST00000342220 IGHV4-28A0A0C4DH34 117 aa9.28□□□□□ -0.92
COL18A1-201ENST00000342220 KRTAP10-11P60412 298 aa9.28□□□□□ -0.92
COL18A1-201ENST00000342220 MDFIQ99750 246 aa9.28□□□□□ -0.92
COL18A1-201ENST00000342220 C1orf43Q9BWL3 253 aa9.28□□□□□ -0.92
COL18A1-201ENST00000342220 DPH3Q96FX2 82 aa9.28□□□□□ -0.92
COL18A1-201ENST00000342220 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.92
COL18A1-201ENST00000342220 UBE2L6O14933 153 aa9.27□□□□□ -0.92
COL18A1-201ENST00000342220 FAM104AQ969W3 186 aa9.27□□□□□ -0.92
COL18A1-201ENST00000342220 TRAV8-3A0A0A6YYJ7 113 aa9.27□□□□□ -0.93
COL18A1-201ENST00000342220 OXTP01178 125 aa9.27□□□□□ -0.93
COL18A1-201ENST00000342220 GYPEP15421 78 aa9.27□□□□□ -0.93
COL18A1-201ENST00000342220 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 RS1O15537 224 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 IMUPQ9GZP8 106 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 A0A0J9YXY3 114 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 K7EQD1 137 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 IGHV3-30-3P0DP02 117 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 LINC00467Q9BRT7 94 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
COL18A1-201ENST00000342220 PRSS2P07478 247 aa9.25□□□□□ -0.93
COL18A1-201ENST00000342220 H3BT86 120 aa9.25□□□□□ -0.93
COL18A1-201ENST00000342220 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
COL18A1-201ENST00000342220 A0A0B4J2C4 111 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms