RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
RET-201ENST00000340058 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
RET-201ENST00000340058 OVOL2Q9BRP0 275 aa10.67□□□□□ -0.7
RET-201ENST00000340058 CRYBA4P53673 196 aa10.66□□□□□ -0.7
RET-201ENST00000340058 MIAQ16674 131 aa10.66□□□□□ -0.7
RET-201ENST00000340058 Q9UF83 564 aa10.66□□□□□ -0.7
RET-201ENST00000340058 NOTCH1P46531 2555 aa10.66□□□□□ -0.7
RET-201ENST00000340058 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
RET-201ENST00000340058 CHCHD10Q8WYQ3 142 aaPredicted RBP10.66□□□□□ -0.7
RET-201ENST00000340058 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
RET-201ENST00000340058 C11orf45Q8TAV5 145 aa10.66□□□□□ -0.7
RET-201ENST00000340058 RETNQ9HD89 108 aa10.65□□□□□ -0.7
RET-201ENST00000340058 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
RET-201ENST00000340058 UBE2D4Q9Y2X8 147 aa10.64□□□□□ -0.71
RET-201ENST00000340058 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
RET-201ENST00000340058 DEFB131BA0A096LNP1 70 aa10.63□□□□□ -0.71
RET-201ENST00000340058 RBMY1FQ15415 496 aaKnown RBP10.63□□□□□ -0.71
RET-201ENST00000340058 TRBV6-4A0A1B0GX49 114 aa10.63□□□□□ -0.71
RET-201ENST00000340058 POM121L12Q8N7R1 296 aa10.63□□□□□ -0.71
RET-201ENST00000340058 COL27A1Q8IZC6 1860 aaPredicted RBP10.62□□□□□ -0.71
RET-201ENST00000340058 UBE2BP63146 152 aa10.62□□□□□ -0.71
RET-201ENST00000340058 F8WEM9 126 aa10.62□□□□□ -0.71
RET-201ENST00000340058 SLPIP03973 132 aa10.62□□□□□ -0.71
RET-201ENST00000340058 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
RET-201ENST00000340058 FOXI1Q12951 378 aa10.62□□□□□ -0.71
RET-201ENST00000340058 COX8CQ7Z4L0 72 aa10.62□□□□□ -0.71
RET-201ENST00000340058 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
RET-201ENST00000340058 COL6A5A8TX70 2615 aa10.62□□□□□ -0.71
RET-201ENST00000340058 IGKV3D-7A0A0C4DH55 119 aa10.61□□□□□ -0.71
RET-201ENST00000340058 NDUFA1O15239 70 aa10.61□□□□□ -0.71
RET-201ENST00000340058 LINC00308Q8TCZ7 52 aa10.61□□□□□ -0.71
RET-201ENST00000340058 IGKV2-24A0A0C4DH68 120 aa10.61□□□□□ -0.71
RET-201ENST00000340058 IGHV4-30-4P0DP06 118 aa10.61□□□□□ -0.71
RET-201ENST00000340058 NBEAL1Q6ZS30 2694 aa10.61□□□□□ -0.71
RET-201ENST00000340058 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
RET-201ENST00000340058 TNRC18O15417 2968 aaPredicted RBP10.61□□□□□ -0.71
RET-201ENST00000340058 TEX49A0A1B0GTD5 131 aa10.6□□□□□ -0.71
RET-201ENST00000340058 TRIAP1O43715 76 aa10.6□□□□□ -0.71
RET-201ENST00000340058 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
RET-201ENST00000340058 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
RET-201ENST00000340058 ITPR1Q14643 2758 aa10.6□□□□□ -0.71
RET-201ENST00000340058 LYRM9A8MSI8 78 aa10.59□□□□□ -0.71
RET-201ENST00000340058 LRBAP50851 2863 aa10.59□□□□□ -0.71
RET-201ENST00000340058 BRI3O95415 125 aa10.59□□□□□ -0.71
RET-201ENST00000340058 DSCR8Q96T75 97 aa10.59□□□□□ -0.71
RET-201ENST00000340058 UBL5Q9BZL1 73 aa10.59□□□□□ -0.71
RET-201ENST00000340058 PYGO1Q9Y3Y4 419 aa10.59□□□□□ -0.71
RET-201ENST00000340058 RMI2Q96E14 147 aa10.58□□□□□ -0.72
RET-201ENST00000340058 USP34Q70CQ2 3546 aa10.58□□□□□ -0.72
RET-201ENST00000340058 IGLV4-60A0A075B6I1 120 aa10.58□□□□□ -0.72
RET-201ENST00000340058 SMIM9A6NGZ8 99 aa10.58□□□□□ -0.72
RET-201ENST00000340058 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
RET-201ENST00000340058 UBE2D3P61077 147 aa10.57□□□□□ -0.72
RET-201ENST00000340058 UBE2D2P62837 147 aa10.57□□□□□ -0.72
RET-201ENST00000340058 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
RET-201ENST00000340058 TRBV10-2A0A0K0K1G8 114 aa10.57□□□□□ -0.72
RET-201ENST00000340058 COX6A2Q02221 97 aa10.56□□□□□ -0.72
RET-201ENST00000340058 UNC79Q9P2D8 2635 aa10.56□□□□□ -0.72
RET-201ENST00000340058 UBE2D1P51668 147 aa10.56□□□□□ -0.72
RET-201ENST00000340058 RPL32P62910 135 aaKnown RBP10.56□□□□□ -0.72
RET-201ENST00000340058 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
RET-201ENST00000340058 KPRPQ5T749 579 aaPredicted RBP10.56□□□□□ -0.72
RET-201ENST00000340058 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
RET-201ENST00000340058 ETDCA0A1B0GVM5 59 aa10.55□□□□□ -0.72
RET-201ENST00000340058 H0YGX0 51 aa10.55□□□□□ -0.72
RET-201ENST00000340058 MIFP14174 115 aa10.55□□□□□ -0.72
RET-201ENST00000340058 TIRAPP58753 221 aa10.55□□□□□ -0.72
RET-201ENST00000340058 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
RET-201ENST00000340058 NBEAL2Q6ZNJ1 2754 aa10.55□□□□□ -0.72
RET-201ENST00000340058 G3V4G9 280 aa10.55□□□□□ -0.72
RET-201ENST00000340058 NANOS2P60321 138 aaKnown RBP10.55□□□□□ -0.72
RET-201ENST00000340058 KIF25-AS1Q9Y6Z4 181 aa10.55□□□□□ -0.72
RET-201ENST00000340058 LINC00959A0A1B0GUT2 108 aa10.54□□□□□ -0.72
RET-201ENST00000340058 CHCHD7Q9BUK0 85 aa10.54□□□□□ -0.72
RET-201ENST00000340058 MUC3AQ02505 3323 aa10.54□□□□□ -0.72
RET-201ENST00000340058 A0A0B4J2C4 111 aa10.53□□□□□ -0.72
RET-201ENST00000340058 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
RET-201ENST00000340058 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.53□□□□□ -0.72
RET-201ENST00000340058 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
RET-201ENST00000340058 SPANXB1Q9NS25 103 aaPredicted RBP10.53□□□□□ -0.72
RET-201ENST00000340058 C9orf153Q5TBE3 101 aa10.52□□□□□ -0.73
RET-201ENST00000340058 LINC00315P59091 139 aa10.52□□□□□ -0.73
RET-201ENST00000340058 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.73
RET-201ENST00000340058 ADAMTSL4-AS1Q5T5F5 129 aa10.51□□□□□ -0.73
RET-201ENST00000340058 hADV29S1A0JD25 119 aa10.51□□□□□ -0.73
RET-201ENST00000340058 PRR3P79522 188 aaKnown RBP10.51□□□□□ -0.73
RET-201ENST00000340058 A0A0J9YWU9 116 aa10.5□□□□□ -0.73
RET-201ENST00000340058 B5MCH6 92 aa10.5□□□□□ -0.73
RET-201ENST00000340058 C6orf99Q4VX62 202 aa10.5□□□□□ -0.73
RET-201ENST00000340058 A0A096LNI7 61 aa10.49□□□□□ -0.73
RET-201ENST00000340058 MT-ATP8P03928 68 aa10.49□□□□□ -0.73
RET-201ENST00000340058 FHL2Q14192 279 aa10.49□□□□□ -0.73
RET-201ENST00000340058 CXCL5P42830 114 aa10.49□□□□□ -0.73
RET-201ENST00000340058 H3BT86 120 aa10.48□□□□□ -0.73
RET-201ENST00000340058 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
RET-201ENST00000340058 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
RET-201ENST00000340058 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
RET-201ENST00000340058 TRACP01848 142 aa10.48□□□□□ -0.73
RET-201ENST00000340058 Q6ZTC4 211 aa10.48□□□□□ -0.73
RET-201ENST00000340058 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms