RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 NHLRC4P0CG21 123 aaPredicted RBP10.23□□□□□ -0.77
PCDH8-201ENST00000338862 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
PCDH8-201ENST00000338862 LINC00242Q5T6M2 205 aa10.23□□□□□ -0.77
PCDH8-201ENST00000338862 LECT2O14960 151 aa10.23□□□□□ -0.77
PCDH8-201ENST00000338862 COPS9Q8WXC6 57 aa10.22□□□□□ -0.77
PCDH8-201ENST00000338862 MXRA5Q9NR99 2828 aa10.22□□□□□ -0.77
PCDH8-201ENST00000338862 KLK5Q9Y337 293 aaPredicted RBP10.22□□□□□ -0.77
PCDH8-201ENST00000338862 HECTD1Q9ULT8 2610 aa10.22□□□□□ -0.77
PCDH8-201ENST00000338862 PYGO1Q9Y3Y4 419 aa10.22□□□□□ -0.77
PCDH8-201ENST00000338862 COX7A2LO14548 114 aa10.21□□□□□ -0.77
PCDH8-201ENST00000338862 SBSPONQ8IVN8 264 aa10.21□□□□□ -0.77
PCDH8-201ENST00000338862 LITAFQ99732 161 aa10.21□□□□□ -0.78
PCDH8-201ENST00000338862 NIPBLQ6KC79 2804 aaeCLIP10.21□□□□□ -0.78
PCDH8-201ENST00000338862 Q96MF0 132 aa10.2□□□□□ -0.78
PCDH8-201ENST00000338862 SPANXDQ9BXN6 97 aa10.2□□□□□ -0.78
PCDH8-201ENST00000338862 SPANXCQ9NY87 97 aa10.2□□□□□ -0.78
PCDH8-201ENST00000338862 K7EQD1 137 aa10.2□□□□□ -0.78
PCDH8-201ENST00000338862 CITED2Q99967 270 aaPredicted RBP10.2□□□□□ -0.78
PCDH8-201ENST00000338862 NDUFA1O15239 70 aa10.19□□□□□ -0.78
PCDH8-201ENST00000338862 DEFB4AO15263 64 aa10.19□□□□□ -0.78
PCDH8-201ENST00000338862 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
PCDH8-201ENST00000338862 IGSF10Q6WRI0 2623 aa10.19□□□□□ -0.78
PCDH8-201ENST00000338862 NCR3O14931 201 aa10.19□□□□□ -0.78
PCDH8-201ENST00000338862 TIRAPP58753 221 aa10.18□□□□□ -0.78
PCDH8-201ENST00000338862 ZNF702PQ9H963 129 aa10.18□□□□□ -0.78
PCDH8-201ENST00000338862 ITPR3Q14573 2671 aa10.17□□□□□ -0.78
PCDH8-201ENST00000338862 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
PCDH8-201ENST00000338862 DEFB114Q30KQ6 69 aa10.17□□□□□ -0.78
PCDH8-201ENST00000338862 WFDC11Q8NEX6 87 aa10.17□□□□□ -0.78
PCDH8-201ENST00000338862 TMEM89A2RUT3 159 aa10.17□□□□□ -0.78
PCDH8-201ENST00000338862 COX7B2Q8TF08 81 aa10.17□□□□□ -0.78
PCDH8-201ENST00000338862 A0A087WVE0 104 aa10.16□□□□□ -0.78
PCDH8-201ENST00000338862 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
PCDH8-201ENST00000338862 FAM218AQ96MZ4 157 aa10.16□□□□□ -0.78
PCDH8-201ENST00000338862 TRAV13-2A0A0B4J235 113 aa10.15□□□□□ -0.78
PCDH8-201ENST00000338862 A0A1B0GX51 115 aa10.15□□□□□ -0.78
PCDH8-201ENST00000338862 CCL24O00175 119 aa10.15□□□□□ -0.78
PCDH8-201ENST00000338862 INAFM2P0DMQ5 153 aa10.15□□□□□ -0.78
PCDH8-201ENST00000338862 MALP21145 153 aa10.15□□□□□ -0.78
PCDH8-201ENST00000338862 KRTAP10-9P60411 292 aa10.15□□□□□ -0.78
PCDH8-201ENST00000338862 WFDC9Q8NEX5 89 aa10.15□□□□□ -0.78
PCDH8-201ENST00000338862 HIST2H2BCQ6DN03 193 aa10.14□□□□□ -0.79
PCDH8-201ENST00000338862 DNAJC30Q96LL9 226 aa10.14□□□□□ -0.79
PCDH8-201ENST00000338862 F8P00451 2351 aa10.14□□□□□ -0.79
PCDH8-201ENST00000338862 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
PCDH8-201ENST00000338862 hADV29S1A0JD25 119 aa10.13□□□□□ -0.79
PCDH8-201ENST00000338862 LINC00526Q96FQ7 95 aa10.13□□□□□ -0.79
PCDH8-201ENST00000338862 A0A087WYN8 130 aa10.13□□□□□ -0.79
PCDH8-201ENST00000338862 NTM-AS1Q6ZSK4 140 aa10.13□□□□□ -0.79
PCDH8-201ENST00000338862 TMEM86BQ8N661 226 aa10.12□□□□□ -0.79
PCDH8-201ENST00000338862 LOC107984640A0A0U1RRK4 108 aa10.12□□□□□ -0.79
PCDH8-201ENST00000338862 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
PCDH8-201ENST00000338862 LINC00643Q86TS7 51 aa10.12□□□□□ -0.79
PCDH8-201ENST00000338862 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
PCDH8-201ENST00000338862 SMIM11BQ8TCY0 68 aa10.12□□□□□ -0.79
PCDH8-201ENST00000338862 KLK9Q2XQG4 91 aa10.11□□□□□ -0.79
PCDH8-201ENST00000338862 S100A7L2Q5SY68 101 aa10.11□□□□□ -0.79
PCDH8-201ENST00000338862 LAMTOR3Q9UHA4 124 aa10.11□□□□□ -0.79
PCDH8-201ENST00000338862 CDC42SE2Q9NRR3 84 aa10.11□□□□□ -0.79
PCDH8-201ENST00000338862 DSCR9P59020 149 aa10.1□□□□□ -0.79
PCDH8-201ENST00000338862 Q6YL49 198 aa10.1□□□□□ -0.79
PCDH8-201ENST00000338862 FAM104AQ969W3 186 aa10.1□□□□□ -0.79
PCDH8-201ENST00000338862 LINC00337Q8N6G1 96 aa10.1□□□□□ -0.79
PCDH8-201ENST00000338862 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
PCDH8-201ENST00000338862 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
PCDH8-201ENST00000338862 PF4P02776 101 aa10.09□□□□□ -0.79
PCDH8-201ENST00000338862 GYPEP15421 78 aa10.09□□□□□ -0.79
PCDH8-201ENST00000338862 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
PCDH8-201ENST00000338862 CCL18P55774 89 aa10.08□□□□□ -0.8
PCDH8-201ENST00000338862 HAMPP81172 84 aa10.08□□□□□ -0.8
PCDH8-201ENST00000338862 PPDPFQ9H3Y8 114 aa10.08□□□□□ -0.8
PCDH8-201ENST00000338862 ACYP1P07311 99 aa10.08□□□□□ -0.8
PCDH8-201ENST00000338862 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
PCDH8-201ENST00000338862 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
PCDH8-201ENST00000338862 SS18Q15532 418 aa10.06□□□□□ -0.8
PCDH8-201ENST00000338862 TIMM17BO60830 172 aa10.06□□□□□ -0.8
PCDH8-201ENST00000338862 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
PCDH8-201ENST00000338862 TMEM126AQ9H061 195 aa10.06□□□□□ -0.8
PCDH8-201ENST00000338862 C4orf3Q8WVX3 66 aa10.05□□□□□ -0.8
PCDH8-201ENST00000338862 BRI3O95415 125 aa10.05□□□□□ -0.8
PCDH8-201ENST00000338862 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
PCDH8-201ENST00000338862 Q6Q795 121 aa10.05□□□□□ -0.8
PCDH8-201ENST00000338862 A8MTW9 85 aa10.04□□□□□ -0.8
PCDH8-201ENST00000338862 TRACP01848 142 aa10.04□□□□□ -0.8
PCDH8-201ENST00000338862 CXCL5P42830 114 aa10.04□□□□□ -0.8
PCDH8-201ENST00000338862 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
PCDH8-201ENST00000338862 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
PCDH8-201ENST00000338862 J3QLI3 93 aa10.04□□□□□ -0.8
PCDH8-201ENST00000338862 ORMDL1Q9P0S3 153 aa10.04□□□□□ -0.8
PCDH8-201ENST00000338862 LINC00269Q8N2A0 174 aa10.03□□□□□ -0.8
PCDH8-201ENST00000338862 PRORYQ9H606 182 aa10.03□□□□□ -0.8
PCDH8-201ENST00000338862 ATRQ13535 2644 aa10.03□□□□□ -0.8
PCDH8-201ENST00000338862 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
PCDH8-201ENST00000338862 LINC00846Q9NV44 126 aa10.02□□□□□ -0.81
PCDH8-201ENST00000338862 SETXQ7Z333 2677 aaKnown RBP10.02□□□□□ -0.81
PCDH8-201ENST00000338862 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
PCDH8-201ENST00000338862 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
PCDH8-201ENST00000338862 DNAJC9-AS1A6NH13 148 aa10.01□□□□□ -0.81
PCDH8-201ENST00000338862 APCP25054 2843 aa10.01□□□□□ -0.81
PCDH8-201ENST00000338862 TRBV6-8A0A0A6YYG3 113 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms