RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 A0A1B0GV72 72 aa7.71□□□□□ -1.18
RTN3-201ENST00000338850 SCGB1C2P0DMR2 95 aa7.71□□□□□ -1.18
RTN3-201ENST00000338850 LINC01620Q4KN68 170 aa7.71□□□□□ -1.18
RTN3-201ENST00000338850 CARD19Q96LW7 228 aa7.71□□□□□ -1.18
RTN3-201ENST00000338850 GTSF1LQ9H1H1 148 aa7.71□□□□□ -1.18
RTN3-201ENST00000338850 TENM3Q9P273 2699 aa7.71□□□□□ -1.18
RTN3-201ENST00000338850 K7EQD1 137 aa7.7□□□□□ -1.18
RTN3-201ENST00000338850 COX6CP09669 75 aa7.7□□□□□ -1.18
RTN3-201ENST00000338850 INSL3P51460 131 aa7.7□□□□□ -1.18
RTN3-201ENST00000338850 RPL36AP83881 106 aaKnown RBP7.7□□□□□ -1.18
RTN3-201ENST00000338850 DEFB136Q30KP8 78 aa7.7□□□□□ -1.18
RTN3-201ENST00000338850 DEFB121Q5J5C9 76 aa7.7□□□□□ -1.18
RTN3-201ENST00000338850 Q6ZSN1 163 aa7.7□□□□□ -1.18
RTN3-201ENST00000338850 ANKRD29Q8N6D5 301 aa7.7□□□□□ -1.18
RTN3-201ENST00000338850 RPL36ALQ969Q0 106 aaKnown RBP7.7□□□□□ -1.18
RTN3-201ENST00000338850 HERV-K104P63124 156 aa7.69□□□□□ -1.18
RTN3-201ENST00000338850 CIRBPQ14011 172 aaKnown RBP7.69□□□□□ -1.18
RTN3-201ENST00000338850 STHQ8IWL8 128 aa7.69□□□□□ -1.18
RTN3-201ENST00000338850 C1orf158Q8N1D5 194 aa7.69□□□□□ -1.18
RTN3-201ENST00000338850 ICOSQ9Y6W8 199 aa7.69□□□□□ -1.18
RTN3-201ENST00000338850 TRAV8-3A0A0A6YYJ7 113 aa7.68□□□□□ -1.18
RTN3-201ENST00000338850 FAM240AA0A1B0GVK7 77 aa7.68□□□□□ -1.18
RTN3-201ENST00000338850 CCL24O00175 119 aa7.68□□□□□ -1.18
RTN3-201ENST00000338850 MRPL23Q16540 153 aaKnown RBP7.68□□□□□ -1.18
RTN3-201ENST00000338850 B9D2Q9BPU9 175 aa7.68□□□□□ -1.18
RTN3-201ENST00000338850 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.67□□□□□ -1.18
RTN3-201ENST00000338850 IGHV3OR16-12A0A075B7B8 117 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 IGHV3-73A0A0B4J1V6 119 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 IGKV2-29A2NJV5 120 aaPredicted RBP7.67□□□□□ -1.18
RTN3-201ENST00000338850 C9JAW5 83 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 LST1O00453 97 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 TRIAP1O43715 76 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 DGAT2L7PQ6IED9 249 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 Q6Q795 121 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 C16orf74Q96GX8 76 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 TMEM101Q96IK0 257 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 DNAH9Q9NYC9 4486 aa7.67□□□□□ -1.18
RTN3-201ENST00000338850 IGHV3-64A0A075B6Q5 118 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 SPINK8P0C7L1 97 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 Q1RN00 199 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 ADAMTSL4-AS1Q5T5F5 129 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 LINC00242Q5T6M2 205 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 FAM222AQ5U5X8 452 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 OVOL2Q9BRP0 275 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 SORL1Q92673 2214 aa7.66□□□□□ -1.18
RTN3-201ENST00000338850 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.18
RTN3-201ENST00000338850 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.18
RTN3-201ENST00000338850 SFTA2Q6UW10 78 aa7.65□□□□□ -1.18
RTN3-201ENST00000338850 DEFB104AQ8WTQ1 72 aa7.65□□□□□ -1.18
RTN3-201ENST00000338850 ZNF625Q96I27 306 aaPredicted RBP7.65□□□□□ -1.18
RTN3-201ENST00000338850 STAB2Q8WWQ8 2551 aa7.64□□□□□ -1.19
RTN3-201ENST00000338850 F5H768 121 aa7.64□□□□□ -1.19
RTN3-201ENST00000338850 LINC00694P0DN24 101 aa7.64□□□□□ -1.19
RTN3-201ENST00000338850 HTN1P15515 57 aa7.64□□□□□ -1.19
RTN3-201ENST00000338850 C9orf66Q5T8R8 295 aa7.64□□□□□ -1.19
RTN3-201ENST00000338850 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
RTN3-201ENST00000338850 TRGV1A0A0A0MS02 117 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 IGLV1-51P01701 117 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 XGP55808 180 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 LINC00308Q8TCZ7 52 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 UBE2WQ96B02 151 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 WWC2-AS2Q96NR7 200 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 TMEM243Q9BU79 118 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 XCL2Q9UBD3 114 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 Q9UF83 564 aa7.63□□□□□ -1.19
RTN3-201ENST00000338850 KMT2CQ8NEZ4 4911 aaKnown RBP7.62□□□□□ -1.19
RTN3-201ENST00000338850 TRAV26-1A0A087WT03 109 aa7.62□□□□□ -1.19
RTN3-201ENST00000338850 PLAC8L1A1L4L8 177 aa7.62□□□□□ -1.19
RTN3-201ENST00000338850 PRSS2P07478 247 aa7.62□□□□□ -1.19
RTN3-201ENST00000338850 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
RTN3-201ENST00000338850 IGHV3-38A0A0C4DH36 116 aa7.61□□□□□ -1.19
RTN3-201ENST00000338850 COX7A2LO14548 114 aa7.61□□□□□ -1.19
RTN3-201ENST00000338850 TRACP01848 142 aa7.61□□□□□ -1.19
RTN3-201ENST00000338850 NHLRC4P0CG21 123 aaPredicted RBP7.61□□□□□ -1.19
RTN3-201ENST00000338850 RNASE13Q5GAN3 156 aaKnown RBP7.61□□□□□ -1.19
RTN3-201ENST00000338850 NTN5Q8WTR8 489 aaPredicted RBP7.61□□□□□ -1.19
RTN3-201ENST00000338850 Q9H8V8 135 aa7.61□□□□□ -1.19
RTN3-201ENST00000338850 C19orf73Q9NVV2 129 aa7.61□□□□□ -1.19
RTN3-201ENST00000338850 MT-ATP8P03928 68 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 GIG44P09565 113 aaPredicted RBP7.6□□□□□ -1.19
RTN3-201ENST00000338850 CKS1BP61024 79 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 COX6A2Q02221 97 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 Q6ZTI0 123 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 LINC01561Q8N1V8 128 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 LINC00612Q8N6U2 182 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 CSNK1G2-AS1Q8NCQ2 148 aa7.6□□□□□ -1.19
RTN3-201ENST00000338850 PRM2P04554 102 aa7.59□□□□□ -1.19
RTN3-201ENST00000338850 ACYP1P07311 99 aa7.59□□□□□ -1.19
RTN3-201ENST00000338850 KIR2DL5BQ8NHK3 375 aa7.59□□□□□ -1.19
RTN3-201ENST00000338850 TRAV8-4A0A0B4J246 113 aa7.58□□□□□ -1.2
RTN3-201ENST00000338850 H7C2G1 150 aa7.58□□□□□ -1.2
RTN3-201ENST00000338850 UBE2L6O14933 153 aa7.58□□□□□ -1.2
RTN3-201ENST00000338850 TRAV13-2A0A0B4J235 113 aa7.57□□□□□ -1.2
RTN3-201ENST00000338850 A8MZ25 164 aa7.57□□□□□ -1.2
RTN3-201ENST00000338850 RPL28P46779 137 aaKnown RBP7.56□□□□□ -1.2
RTN3-201ENST00000338850 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
RTN3-201ENST00000338850 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms