RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
LIMK1-201ENST00000336180 RPL36ALQ969Q0 106 aaKnown RBP8.93□□□□□ -0.98
LIMK1-201ENST00000336180 J3KT08 172 aa8.93□□□□□ -0.98
LIMK1-201ENST00000336180 J3QQQ9 107 aa8.93□□□□□ -0.98
LIMK1-201ENST00000336180 COX6A2Q02221 97 aa8.93□□□□□ -0.98
LIMK1-201ENST00000336180 LGALS3P17931 250 aaKnown RBP8.92□□□□□ -0.98
LIMK1-201ENST00000336180 HERVK_113P61574 105 aa8.92□□□□□ -0.98
LIMK1-201ENST00000336180 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
LIMK1-201ENST00000336180 DAND5Q8N907 189 aa8.92□□□□□ -0.98
LIMK1-201ENST00000336180 PRO0461Q9UI25 63 aa8.92□□□□□ -0.98
LIMK1-201ENST00000336180 H7C2G1 150 aa8.92□□□□□ -0.98
LIMK1-201ENST00000336180 CLPSL2Q6UWE3 100 aa8.92□□□□□ -0.98
LIMK1-201ENST00000336180 TINCRA0A1B0GVN0 87 aa8.91□□□□□ -0.98
LIMK1-201ENST00000336180 CDKN2A-AS1Q9UH64 79 aa8.91□□□□□ -0.98
LIMK1-201ENST00000336180 PRB2P02812 416 aaPredicted RBP8.9□□□□□ -0.98
LIMK1-201ENST00000336180 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
LIMK1-201ENST00000336180 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.98
LIMK1-201ENST00000336180 RETNQ9HD89 108 aa8.9□□□□□ -0.98
LIMK1-201ENST00000336180 TMEM223A0PJW6 202 aa8.9□□□□□ -0.99
LIMK1-201ENST00000336180 SNCGO76070 127 aa8.9□□□□□ -0.99
LIMK1-201ENST00000336180 C12orf74Q32Q52 190 aa8.89□□□□□ -0.99
LIMK1-201ENST00000336180 C9orf66Q5T8R8 295 aa8.89□□□□□ -0.99
LIMK1-201ENST00000336180 X6R8D5 127 aa8.89□□□□□ -0.99
LIMK1-201ENST00000336180 IGHV3-30-3P0DP02 117 aa8.89□□□□□ -0.99
LIMK1-201ENST00000336180 Q8N3U1 123 aa8.89□□□□□ -0.99
LIMK1-201ENST00000336180 HIGD1BQ9P298 99 aa8.89□□□□□ -0.99
LIMK1-201ENST00000336180 PRSS2P07478 247 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 DAZ2Q13117 558 aaKnown RBP8.88□□□□□ -0.99
LIMK1-201ENST00000336180 FHL2Q14192 279 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 ANK2Q01484 3957 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 UBE2D3P61077 147 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 UBE2D2P62837 147 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 CHCHD5Q9BSY4 110 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 C10orf126Q8N4M7 172 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 AMELXQ99217 191 aa8.88□□□□□ -0.99
LIMK1-201ENST00000336180 UBE2L6O14933 153 aa8.87□□□□□ -0.99
LIMK1-201ENST00000336180 GYPEP15421 78 aa8.87□□□□□ -0.99
LIMK1-201ENST00000336180 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
LIMK1-201ENST00000336180 CMC4P56277 68 aaPredicted RBP8.87□□□□□ -0.99
LIMK1-201ENST00000336180 IGLV4-60A0A075B6I1 120 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 LINC01549A6NIU2 74 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
LIMK1-201ENST00000336180 V9GYY9 64 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 FAM236AA0A1B0GUQ0 79 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 FAM236BA0A1B0GV22 79 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 HERVK_113P63121 156 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 C11orf68Q9H3H3 251 aaKnown RBP8.86□□□□□ -0.99
LIMK1-201ENST00000336180 NBEAL1Q6ZS30 2694 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 IGLL5B9A064 214 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 PAPPA-AS1Q5QFB9 102 aa8.86□□□□□ -0.99
LIMK1-201ENST00000336180 IGHV4-28A0A0C4DH34 117 aa8.85□□□□□ -0.99
LIMK1-201ENST00000336180 EIF4EBP3O60516 100 aaPredicted RBP8.85□□□□□ -0.99
LIMK1-201ENST00000336180 IGHV4-30-4P0DP06 118 aa8.85□□□□□ -0.99
LIMK1-201ENST00000336180 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 SPANXA1Q9NS26 97 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 MGAM2Q2M2H8 2515 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 LEPROTO15243 131 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 UBE2D1P51668 147 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
LIMK1-201ENST00000336180 ADAMTSL4-AS1Q5T5F5 129 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 TMEM243Q9BU79 118 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 TOMM7Q9P0U1 55 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 PIK3CD-AS1Q5SR53 167 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 LINC00242Q5T6M2 205 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
LIMK1-201ENST00000336180 MUSTN1Q8IVN3 82 aa8.83□□□□□ -1
LIMK1-201ENST00000336180 C9orf153Q5TBE3 101 aa8.83□□□□□ -1
LIMK1-201ENST00000336180 OVOL2Q9BRP0 275 aa8.83□□□□□ -1
LIMK1-201ENST00000336180 A0A0J9YXY3 114 aa8.82□□□□□ -1
LIMK1-201ENST00000336180 PPDPFLQ8WWR9 84 aa8.82□□□□□ -1
LIMK1-201ENST00000336180 KRTAP10-11P60412 298 aa8.82□□□□□ -1
LIMK1-201ENST00000336180 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
LIMK1-201ENST00000336180 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
LIMK1-201ENST00000336180 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
LIMK1-201ENST00000336180 TRBV10-1A0A0K0K1A3 114 aa8.81□□□□□ -1
LIMK1-201ENST00000336180 C5orf38Q86SI9 138 aa8.81□□□□□ -1
LIMK1-201ENST00000336180 IGHV3-30P01768 117 aa8.81□□□□□ -1
LIMK1-201ENST00000336180 IGHV3-30-5P0DP03 117 aa8.81□□□□□ -1
LIMK1-201ENST00000336180 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
LIMK1-201ENST00000336180 IGLV10-54A0A075B6I4 117 aa8.8□□□□□ -1
LIMK1-201ENST00000336180 IGHV1-58A0A0C4DH39 117 aa8.8□□□□□ -1
LIMK1-201ENST00000336180 VSIG2Q96IQ7 327 aa8.8□□□□□ -1
LIMK1-201ENST00000336180 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
LIMK1-201ENST00000336180 CFC1BP0CG36 223 aa8.8□□□□□ -1
LIMK1-201ENST00000336180 CFC1P0CG37 223 aa8.8□□□□□ -1
LIMK1-201ENST00000336180 DAD1P61803 113 aa8.8□□□□□ -1
LIMK1-201ENST00000336180 PAX4O43316 350 aa8.79□□□□□ -1
LIMK1-201ENST00000336180 PRIMA1Q86XR5 153 aa8.79□□□□□ -1
LIMK1-201ENST00000336180 Q9H8V8 135 aa8.79□□□□□ -1
LIMK1-201ENST00000336180 TRBV6-8A0A0A6YYG3 113 aa8.79□□□□□ -1
LIMK1-201ENST00000336180 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
LIMK1-201ENST00000336180 XCL1P47992 114 aa8.78□□□□□ -1
LIMK1-201ENST00000336180 PRO0628Q9UI54 55 aa8.78□□□□□ -1
LIMK1-201ENST00000336180 A0A1B0GX51 115 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms