RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RNASE1P07998 156 aaKnown RBP8.76□□□□□ -1.01
VPS33B-201ENST00000333371 HERVK_113P63121 156 aa8.76□□□□□ -1.01
VPS33B-201ENST00000333371 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
VPS33B-201ENST00000333371 PRIMA1Q86XR5 153 aa8.76□□□□□ -1.01
VPS33B-201ENST00000333371 TIMM17BO60830 172 aa8.76□□□□□ -1.01
VPS33B-201ENST00000333371 NHLRC4P0CG21 123 aaPredicted RBP8.76□□□□□ -1.01
VPS33B-201ENST00000333371 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
VPS33B-201ENST00000333371 IL17DQ8TAD2 202 aa8.76□□□□□ -1.01
VPS33B-201ENST00000333371 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
VPS33B-201ENST00000333371 FASNP49327 2511 aaKnown RBP8.76□□□□□ -1.01
VPS33B-201ENST00000333371 IFITM1P13164 125 aa8.75□□□□□ -1.01
VPS33B-201ENST00000333371 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
VPS33B-201ENST00000333371 CIRBPQ14011 172 aaKnown RBP8.75□□□□□ -1.01
VPS33B-201ENST00000333371 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
VPS33B-201ENST00000333371 LINC01006Q8NI28 216 aa8.75□□□□□ -1.01
VPS33B-201ENST00000333371 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
VPS33B-201ENST00000333371 RPL35AP18077 110 aaKnown RBP8.74□□□□□ -1.01
VPS33B-201ENST00000333371 CDC42SE2Q9NRR3 84 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 F5H768 121 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 H3BT86 120 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 GAGE7O76087 117 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 GIG44P09565 113 aaPredicted RBP8.74□□□□□ -1.01
VPS33B-201ENST00000333371 GAGE12FP0CL80 117 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 GAGE12GP0CL81 117 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 GAGE12IP0CL82 117 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
VPS33B-201ENST00000333371 TRAV25A0A0B4J276 109 aa8.73□□□□□ -1.01
VPS33B-201ENST00000333371 C16orf95Q9H693 158 aa8.73□□□□□ -1.01
VPS33B-201ENST00000333371 HIVEP2P31629 2446 aa8.73□□□□□ -1.01
VPS33B-201ENST00000333371 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
VPS33B-201ENST00000333371 SMR3AQ99954 134 aa8.72□□□□□ -1.01
VPS33B-201ENST00000333371 TRGV2A0A075B6R0 118 aa8.71□□□□□ -1.01
VPS33B-201ENST00000333371 HILS1P60008 231 aa8.71□□□□□ -1.01
VPS33B-201ENST00000333371 DAZ2Q13117 558 aaKnown RBP8.71□□□□□ -1.01
VPS33B-201ENST00000333371 DAZ4Q86SG3 579 aaKnown RBP8.71□□□□□ -1.01
VPS33B-201ENST00000333371 FAM218AQ96MZ4 157 aa8.71□□□□□ -1.01
VPS33B-201ENST00000333371 DAZ3Q9NR90 486 aaKnown RBP8.71□□□□□ -1.01
VPS33B-201ENST00000333371 TOMM7Q9P0U1 55 aa8.71□□□□□ -1.01
VPS33B-201ENST00000333371 ANK3Q12955 4377 aaKnown RBP8.71□□□□□ -1.02
VPS33B-201ENST00000333371 HECTD1Q9ULT8 2610 aa8.71□□□□□ -1.02
VPS33B-201ENST00000333371 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
VPS33B-201ENST00000333371 UBE2L6O14933 153 aa8.71□□□□□ -1.02
VPS33B-201ENST00000333371 GAGE6Q13070 117 aa8.71□□□□□ -1.02
VPS33B-201ENST00000333371 VWFP04275 2813 aa8.7□□□□□ -1.02
VPS33B-201ENST00000333371 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
VPS33B-201ENST00000333371 B5MCH6 92 aa8.7□□□□□ -1.02
VPS33B-201ENST00000333371 COX7A2LO14548 114 aa8.7□□□□□ -1.02
VPS33B-201ENST00000333371 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
VPS33B-201ENST00000333371 TMEM243Q9BU79 118 aa8.69□□□□□ -1.02
VPS33B-201ENST00000333371 SS18L2Q9UHA2 77 aa8.69□□□□□ -1.02
VPS33B-201ENST00000333371 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
VPS33B-201ENST00000333371 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
VPS33B-201ENST00000333371 CCDC179H3BU77 68 aa8.69□□□□□ -1.02
VPS33B-201ENST00000333371 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
VPS33B-201ENST00000333371 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
VPS33B-201ENST00000333371 Q9HAA7 133 aa8.68□□□□□ -1.02
VPS33B-201ENST00000333371 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
VPS33B-201ENST00000333371 TRGV4A0A0C4DH28 118 aa8.67□□□□□ -1.02
VPS33B-201ENST00000333371 LY6G6DO95868 133 aa8.66□□□□□ -1.02
VPS33B-201ENST00000333371 DEFB121Q5J5C9 76 aa8.66□□□□□ -1.02
VPS33B-201ENST00000333371 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
VPS33B-201ENST00000333371 C11orf68Q9H3H3 251 aaKnown RBP8.66□□□□□ -1.02
VPS33B-201ENST00000333371 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
VPS33B-201ENST00000333371 CMC4P56277 68 aaPredicted RBP8.66□□□□□ -1.02
VPS33B-201ENST00000333371 C5orf38Q86SI9 138 aa8.65□□□□□ -1.02
VPS33B-201ENST00000333371 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
VPS33B-201ENST00000333371 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.03
VPS33B-201ENST00000333371 IGKV2D-28P01615 120 aa8.65□□□□□ -1.03
VPS33B-201ENST00000333371 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.03
VPS33B-201ENST00000333371 SMCR5Q8TEV8 140 aa8.65□□□□□ -1.03
VPS33B-201ENST00000333371 C19orf73Q9NVV2 129 aa8.65□□□□□ -1.03
VPS33B-201ENST00000333371 CHCHD5Q9BSY4 110 aa8.64□□□□□ -1.03
VPS33B-201ENST00000333371 PFN2P35080 140 aa8.64□□□□□ -1.03
VPS33B-201ENST00000333371 C16orf74Q96GX8 76 aa8.64□□□□□ -1.03
VPS33B-201ENST00000333371 LINC00158P58513 81 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 HERV-K104P63124 156 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 CSNK1G2-AS1Q8NCQ2 148 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 IGLV1-51P01701 117 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 DEFB130BP0DP73 79 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 DEFB130AP0DP74 79 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 Q6Q795 121 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
VPS33B-201ENST00000333371 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
VPS33B-201ENST00000333371 PF4P02776 101 aa8.62□□□□□ -1.03
VPS33B-201ENST00000333371 FHL2Q14192 279 aa8.62□□□□□ -1.03
VPS33B-201ENST00000333371 C9orf129Q5T035 196 aaKnown RBP8.62□□□□□ -1.03
VPS33B-201ENST00000333371 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 TRBV6-4A0A1B0GX49 114 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 CRPP02741 224 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 C3orf56Q8N813 242 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 A0A087WYN8 130 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 A0A096LPF7 62 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 CCL18P55774 89 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 COPS9Q8WXC6 57 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 ATP5G1P05496 136 aa8.61□□□□□ -1.03
VPS33B-201ENST00000333371 TRACP01848 142 aa8.6□□□□□ -1.03
VPS33B-201ENST00000333371 SMIM11BQ8TCY0 68 aa8.6□□□□□ -1.03
VPS33B-201ENST00000333371 INAFM1C9JVW0 142 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms