RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 HIVEP2P31629 2446 aa10.33□□□□□ -0.76
FNDC1-202ENST00000329629 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
FNDC1-202ENST00000329629 PLAC8L1A1L4L8 177 aa10.33□□□□□ -0.76
FNDC1-202ENST00000329629 PMAIP1Q13794 54 aa10.33□□□□□ -0.76
FNDC1-202ENST00000329629 UBE2D3P61077 147 aa10.32□□□□□ -0.76
FNDC1-202ENST00000329629 C18orf65Q6ZTR6 163 aa10.32□□□□□ -0.76
FNDC1-202ENST00000329629 ZNF702PQ9H963 129 aa10.32□□□□□ -0.76
FNDC1-202ENST00000329629 PSMG3-AS1Q96PY0 264 aa10.31□□□□□ -0.76
FNDC1-202ENST00000329629 RETNQ9HD89 108 aa10.31□□□□□ -0.76
FNDC1-202ENST00000329629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.31□□□□□ -0.76
FNDC1-202ENST00000329629 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
FNDC1-202ENST00000329629 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
FNDC1-202ENST00000329629 CRIP2P52943 208 aaPredicted RBP10.31□□□□□ -0.76
FNDC1-202ENST00000329629 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
FNDC1-202ENST00000329629 TRAV7A0A075B6U4 112 aa10.31□□□□□ -0.76
FNDC1-202ENST00000329629 COX17Q14061 63 aa10.31□□□□□ -0.76
FNDC1-202ENST00000329629 ESRGQ1W209 222 aa10.3□□□□□ -0.76
FNDC1-202ENST00000329629 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
FNDC1-202ENST00000329629 CDSNQ15517 529 aa10.3□□□□□ -0.76
FNDC1-202ENST00000329629 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
FNDC1-202ENST00000329629 Q6ZVQ6 151 aa10.3□□□□□ -0.76
FNDC1-202ENST00000329629 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
FNDC1-202ENST00000329629 LINC00208Q96KT6 92 aa10.3□□□□□ -0.76
FNDC1-202ENST00000329629 TRAV10A0A0B4J240 114 aa10.29□□□□□ -0.76
FNDC1-202ENST00000329629 NCOA6Q14686 2063 aaPredicted RBP10.29□□□□□ -0.76
FNDC1-202ENST00000329629 LELP1Q5T871 98 aa10.29□□□□□ -0.76
FNDC1-202ENST00000329629 CUL9Q8IWT3 2517 aa10.29□□□□□ -0.76
FNDC1-202ENST00000329629 ALPK3Q96L96 1907 aa10.29□□□□□ -0.76
FNDC1-202ENST00000329629 A0A087WYN8 130 aa10.28□□□□□ -0.76
FNDC1-202ENST00000329629 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
FNDC1-202ENST00000329629 C10orf25Q5T742 122 aa10.28□□□□□ -0.76
FNDC1-202ENST00000329629 PSPHP1O15172 72 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 DSCAMO60469 2012 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 CYSRT1A8MQ03 144 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 KLLNB2CW77 178 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 PRYO14603 147 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 UBE2D2P62837 147 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 Q8IZM0 81 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 FREM1Q5H8C1 2179 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 TNCP24821 2201 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 KIAA1549Q9HCM3 1950 aa10.27□□□□□ -0.77
FNDC1-202ENST00000329629 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
FNDC1-202ENST00000329629 Q8N814 137 aa10.26□□□□□ -0.77
FNDC1-202ENST00000329629 SMR3AQ99954 134 aa10.26□□□□□ -0.77
FNDC1-202ENST00000329629 PTPRSQ13332 1948 aa10.26□□□□□ -0.77
FNDC1-202ENST00000329629 C10orf142B7Z368 130 aa10.25□□□□□ -0.77
FNDC1-202ENST00000329629 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
FNDC1-202ENST00000329629 KRTAP10-9P60411 292 aa10.25□□□□□ -0.77
FNDC1-202ENST00000329629 PRR3P79522 188 aaKnown RBP10.25□□□□□ -0.77
FNDC1-202ENST00000329629 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
FNDC1-202ENST00000329629 COX6A2Q02221 97 aa10.25□□□□□ -0.77
FNDC1-202ENST00000329629 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
FNDC1-202ENST00000329629 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
FNDC1-202ENST00000329629 UNQ6190/PRO20217Q6UXQ8 127 aa10.23□□□□□ -0.77
FNDC1-202ENST00000329629 MED12LQ86YW9 2145 aa10.23□□□□□ -0.77
FNDC1-202ENST00000329629 TANC2Q9HCD6 1990 aa10.23□□□□□ -0.77
FNDC1-202ENST00000329629 C1orf137Q5JT78 98 aa10.23□□□□□ -0.77
FNDC1-202ENST00000329629 LINC00310P59036 64 aa10.23□□□□□ -0.77
FNDC1-202ENST00000329629 IGHV6-1A0A0B4J1U7 121 aa10.23□□□□□ -0.77
FNDC1-202ENST00000329629 URB1-AS1Q96HZ7 61 aa10.23□□□□□ -0.77
FNDC1-202ENST00000329629 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
FNDC1-202ENST00000329629 TSPEAR-AS2P59090 65 aa10.22□□□□□ -0.77
FNDC1-202ENST00000329629 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
FNDC1-202ENST00000329629 EDN2P20800 178 aa10.22□□□□□ -0.77
FNDC1-202ENST00000329629 X6R8D5 127 aa10.22□□□□□ -0.77
FNDC1-202ENST00000329629 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.77
FNDC1-202ENST00000329629 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.78
FNDC1-202ENST00000329629 Q8N6K4 173 aa10.2□□□□□ -0.78
FNDC1-202ENST00000329629 ACACBO00763 2458 aa10.2□□□□□ -0.78
FNDC1-202ENST00000329629 TRBV7-7A0A0K0K1E9 115 aa10.2□□□□□ -0.78
FNDC1-202ENST00000329629 SMIM1B2RUZ4 78 aa10.2□□□□□ -0.78
FNDC1-202ENST00000329629 Q8N3U1 123 aa10.19□□□□□ -0.78
FNDC1-202ENST00000329629 SPINK1P00995 79 aa10.19□□□□□ -0.78
FNDC1-202ENST00000329629 LY6G6CO95867 125 aa10.19□□□□□ -0.78
FNDC1-202ENST00000329629 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
FNDC1-202ENST00000329629 ADAMTSL4-AS1Q5T5F5 129 aa10.19□□□□□ -0.78
FNDC1-202ENST00000329629 REG3GQ6UW15 175 aa10.19□□□□□ -0.78
FNDC1-202ENST00000329629 MRGPRG-AS1Q2M3A8 158 aa10.19□□□□□ -0.78
FNDC1-202ENST00000329629 ANKHD1Q8IWZ3 2542 aaKnown RBP10.18□□□□□ -0.78
FNDC1-202ENST00000329629 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
FNDC1-202ENST00000329629 ZNF580Q9UK33 172 aa10.18□□□□□ -0.78
FNDC1-202ENST00000329629 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
FNDC1-202ENST00000329629 LRP4O75096 1905 aa10.17□□□□□ -0.78
FNDC1-202ENST00000329629 AVPP01185 164 aa10.17□□□□□ -0.78
FNDC1-202ENST00000329629 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
FNDC1-202ENST00000329629 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
FNDC1-202ENST00000329629 LINC00575Q6W349 94 aa10.16□□□□□ -0.78
FNDC1-202ENST00000329629 IGLV1-40P01703 118 aa10.16□□□□□ -0.78
FNDC1-202ENST00000329629 C6orf223Q8N319 242 aa10.16□□□□□ -0.78
FNDC1-202ENST00000329629 OXLD1Q5BKU9 147 aa10.16□□□□□ -0.78
FNDC1-202ENST00000329629 CRYGAP11844 174 aa10.16□□□□□ -0.78
FNDC1-202ENST00000329629 H0Y9P7 68 aa10.15□□□□□ -0.78
FNDC1-202ENST00000329629 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.78
FNDC1-202ENST00000329629 NOTCH2Q04721 2471 aa10.15□□□□□ -0.78
FNDC1-202ENST00000329629 MUC7Q8TAX7 377 aa10.15□□□□□ -0.79
FNDC1-202ENST00000329629 COL5A1P20908 1838 aaPredicted RBP10.15□□□□□ -0.79
FNDC1-202ENST00000329629 PCNX3Q9H6A9 2034 aa10.13□□□□□ -0.79
FNDC1-202ENST00000329629 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
FNDC1-202ENST00000329629 EGFEM1PQ0D2K5 195 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms