RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RAI1Q7Z5J4 1906 aaPredicted RBP8.23□□□□□ -1.09
COL4A5-201ENST00000328300 EP400Q96L91 3159 aa8.23□□□□□ -1.09
COL4A5-201ENST00000328300 FHL3Q13643 280 aa8.22□□□□□ -1.09
COL4A5-201ENST00000328300 BPY2O14599 106 aa8.22□□□□□ -1.09
COL4A5-201ENST00000328300 FSHBP01225 129 aa8.22□□□□□ -1.09
COL4A5-201ENST00000328300 TRIAP1O43715 76 aa8.22□□□□□ -1.09
COL4A5-201ENST00000328300 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
COL4A5-201ENST00000328300 LOC100131303A0A0U1RQF7 123 aa8.21□□□□□ -1.09
COL4A5-201ENST00000328300 IGF2RP11717 2491 aa8.21□□□□□ -1.1
COL4A5-201ENST00000328300 NANOS2P60321 138 aaKnown RBP8.21□□□□□ -1.1
COL4A5-201ENST00000328300 A0A087WZ39 114 aa8.21□□□□□ -1.1
COL4A5-201ENST00000328300 AMELXQ99217 191 aa8.21□□□□□ -1.1
COL4A5-201ENST00000328300 SPTSSBQ8NFR3 76 aa8.2□□□□□ -1.1
COL4A5-201ENST00000328300 LINC00242Q5T6M2 205 aa8.2□□□□□ -1.1
COL4A5-201ENST00000328300 HCFC1P51610 2035 aa8.2□□□□□ -1.1
COL4A5-201ENST00000328300 TNCP24821 2201 aa8.2□□□□□ -1.1
COL4A5-201ENST00000328300 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
COL4A5-201ENST00000328300 ENHOQ6UWT2 76 aa8.2□□□□□ -1.1
COL4A5-201ENST00000328300 HIGD2AQ9BW72 106 aa8.2□□□□□ -1.1
COL4A5-201ENST00000328300 EDN2P20800 178 aa8.19□□□□□ -1.1
COL4A5-201ENST00000328300 FAM240AA0A1B0GVK7 77 aa8.19□□□□□ -1.1
COL4A5-201ENST00000328300 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
COL4A5-201ENST00000328300 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
COL4A5-201ENST00000328300 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-201ENST00000328300 FAM19A4Q96LR4 140 aa8.19□□□□□ -1.1
COL4A5-201ENST00000328300 MRPL55Q7Z7F7 128 aaKnown RBP8.18□□□□□ -1.1
COL4A5-201ENST00000328300 H0Y9J4 135 aa8.18□□□□□ -1.1
COL4A5-201ENST00000328300 FAM19A5Q7Z5A7 132 aaPredicted RBP8.18□□□□□ -1.1
COL4A5-201ENST00000328300 IMUPQ9GZP8 106 aa8.18□□□□□ -1.1
COL4A5-201ENST00000328300 LINC01546A6NGU7 62 aa8.17□□□□□ -1.1
COL4A5-201ENST00000328300 H3BNG1 76 aa8.17□□□□□ -1.1
COL4A5-201ENST00000328300 A0A0U1RQV1 116 aa8.17□□□□□ -1.1
COL4A5-201ENST00000328300 C6orf99Q4VX62 202 aa8.17□□□□□ -1.1
COL4A5-201ENST00000328300 SLPIP03973 132 aa8.16□□□□□ -1.1
COL4A5-201ENST00000328300 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
COL4A5-201ENST00000328300 SERP2Q8N6R1 65 aa8.16□□□□□ -1.1
COL4A5-201ENST00000328300 LST1O00453 97 aa8.16□□□□□ -1.1
COL4A5-201ENST00000328300 NOTCH2Q04721 2471 aa8.16□□□□□ -1.1
COL4A5-201ENST00000328300 PRR14LQ5THK1 2151 aa8.16□□□□□ -1.1
COL4A5-201ENST00000328300 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
COL4A5-201ENST00000328300 IGLV2-18A0A075B6J9 118 aa8.15□□□□□ -1.1
COL4A5-201ENST00000328300 SCXQ7RTU7 201 aa8.15□□□□□ -1.1
COL4A5-201ENST00000328300 CCDC179H3BU77 68 aa8.15□□□□□ -1.11
COL4A5-201ENST00000328300 URB1-AS1Q96HZ7 61 aa8.15□□□□□ -1.11
COL4A5-201ENST00000328300 CYSRT1A8MQ03 144 aa8.15□□□□□ -1.11
COL4A5-201ENST00000328300 ZNF73O43830 326 aaPredicted RBP8.15□□□□□ -1.11
COL4A5-201ENST00000328300 CSPG4Q6UVK1 2322 aa8.14□□□□□ -1.11
COL4A5-201ENST00000328300 XGP55808 180 aa8.14□□□□□ -1.11
COL4A5-201ENST00000328300 SEC61GP60059 68 aa8.14□□□□□ -1.11
COL4A5-201ENST00000328300 V9GYY9 64 aa8.14□□□□□ -1.11
COL4A5-201ENST00000328300 GAS8-AS1O95177 125 aa8.14□□□□□ -1.11
COL4A5-201ENST00000328300 ATP5EP56381 51 aaPredicted RBP8.14□□□□□ -1.11
COL4A5-201ENST00000328300 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
COL4A5-201ENST00000328300 KIF25-AS1Q9Y6Z4 181 aa8.13□□□□□ -1.11
COL4A5-201ENST00000328300 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
COL4A5-201ENST00000328300 IGKV4-1P06312 121 aa8.13□□□□□ -1.11
COL4A5-201ENST00000328300 POM121L12Q8N7R1 296 aa8.13□□□□□ -1.11
COL4A5-201ENST00000328300 LINC00310P59036 64 aa8.13□□□□□ -1.11
COL4A5-201ENST00000328300 Q6ZTC4 211 aa8.13□□□□□ -1.11
COL4A5-201ENST00000328300 NDUFC1O43677 76 aa8.12□□□□□ -1.11
COL4A5-201ENST00000328300 COX7CP15954 63 aa8.12□□□□□ -1.11
COL4A5-201ENST00000328300 TLN1Q9Y490 2541 aaKnown RBP8.12□□□□□ -1.11
COL4A5-201ENST00000328300 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
COL4A5-201ENST00000328300 LYPD5Q6UWN5 251 aa8.12□□□□□ -1.11
COL4A5-201ENST00000328300 PTPRBP23467 1997 aa8.12□□□□□ -1.11
COL4A5-201ENST00000328300 LY6G6CO95867 125 aa8.11□□□□□ -1.11
COL4A5-201ENST00000328300 TANC2Q9HCD6 1990 aa8.11□□□□□ -1.11
COL4A5-201ENST00000328300 PRM2P04554 102 aa8.11□□□□□ -1.11
COL4A5-201ENST00000328300 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
COL4A5-201ENST00000328300 PTPN13Q12923 2485 aa8.1□□□□□ -1.11
COL4A5-201ENST00000328300 RETNQ9HD89 108 aa8.1□□□□□ -1.11
COL4A5-201ENST00000328300 SMIM11BQ8TCY0 68 aa8.1□□□□□ -1.11
COL4A5-201ENST00000328300 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
COL4A5-201ENST00000328300 PRRC2AP48634 2157 aaKnown RBP8.09□□□□□ -1.11
COL4A5-201ENST00000328300 A8MZ25 164 aa8.09□□□□□ -1.12
COL4A5-201ENST00000328300 SNURFQ9Y675 71 aa8.09□□□□□ -1.12
COL4A5-201ENST00000328300 PCSK5Q92824 1860 aa8.08□□□□□ -1.12
COL4A5-201ENST00000328300 Q6Q795 121 aa8.08□□□□□ -1.12
COL4A5-201ENST00000328300 PLAC8L1A1L4L8 177 aa8.08□□□□□ -1.12
COL4A5-201ENST00000328300 Q6ZQY7 126 aa8.08□□□□□ -1.12
COL4A5-201ENST00000328300 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
COL4A5-201ENST00000328300 PRYO14603 147 aa8.07□□□□□ -1.12
COL4A5-201ENST00000328300 CCKP06307 115 aa8.07□□□□□ -1.12
COL4A5-201ENST00000328300 LINC00694P0DN24 101 aa8.07□□□□□ -1.12
COL4A5-201ENST00000328300 FAM19A3Q7Z5A8 133 aa8.07□□□□□ -1.12
COL4A5-201ENST00000328300 A0A096LNJ9 63 aa8.06□□□□□ -1.12
COL4A5-201ENST00000328300 LINC01556Q5JQF7 62 aa8.06□□□□□ -1.12
COL4A5-201ENST00000328300 UNQ6190/PRO20217Q6UXQ8 127 aa8.06□□□□□ -1.12
COL4A5-201ENST00000328300 Q6JHZ5 121 aa8.06□□□□□ -1.12
COL4A5-201ENST00000328300 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
COL4A5-201ENST00000328300 M0QXV9 152 aa8.05□□□□□ -1.12
COL4A5-201ENST00000328300 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
COL4A5-201ENST00000328300 Q6ZSN1 163 aa8.05□□□□□ -1.12
COL4A5-201ENST00000328300 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
COL4A5-201ENST00000328300 WFDC10BQ8IUB3 73 aa8.05□□□□□ -1.12
COL4A5-201ENST00000328300 C1orf134Q5TEV5 83 aa8.04□□□□□ -1.12
COL4A5-201ENST00000328300 M0R2N4 97 aa8.04□□□□□ -1.12
COL4A5-201ENST00000328300 CASC2Q6XLA1 102 aa8.04□□□□□ -1.12
COL4A5-201ENST00000328300 LINC00315P59091 139 aa8.04□□□□□ -1.12
COL4A5-201ENST00000328300 COX6A2Q02221 97 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms