RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 Q96MF0 132 aa10.39□□□□□ -0.75
SSBP3-201ENST00000326956 PKD1L2Q7Z442 2459 aa10.38□□□□□ -0.75
SSBP3-201ENST00000326956 CELSR2Q9HCU4 2923 aa10.38□□□□□ -0.75
SSBP3-201ENST00000326956 A0A096LNT2 108 aa10.38□□□□□ -0.75
SSBP3-201ENST00000326956 TRAV25A0A0B4J276 109 aa10.38□□□□□ -0.75
SSBP3-201ENST00000326956 ATP5G1P05496 136 aa10.38□□□□□ -0.75
SSBP3-201ENST00000326956 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 FSHBP01225 129 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 C3orf22Q8N5N4 141 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 LINC00337Q8N6G1 96 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 PPDPFQ9H3Y8 114 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 CXCL5P42830 114 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 OR13C6PQ8NH95 151 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 IL17DQ8TAD2 202 aa10.37□□□□□ -0.75
SSBP3-201ENST00000326956 MYO18BQ8IUG5 2567 aa10.36□□□□□ -0.75
SSBP3-201ENST00000326956 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
SSBP3-201ENST00000326956 CACNA1AO00555 2505 aa10.36□□□□□ -0.75
SSBP3-201ENST00000326956 UQCRQO14949 82 aa10.36□□□□□ -0.75
SSBP3-201ENST00000326956 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
SSBP3-201ENST00000326956 H0YGX0 51 aa10.35□□□□□ -0.75
SSBP3-201ENST00000326956 SMIM11BQ8TCY0 68 aa10.35□□□□□ -0.75
SSBP3-201ENST00000326956 ZANQ9Y493 2812 aa10.35□□□□□ -0.75
SSBP3-201ENST00000326956 PAX4O43316 350 aa10.35□□□□□ -0.75
SSBP3-201ENST00000326956 PFN2P35080 140 aa10.35□□□□□ -0.75
SSBP3-201ENST00000326956 FLNCQ14315 2725 aa10.34□□□□□ -0.75
SSBP3-201ENST00000326956 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
SSBP3-201ENST00000326956 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
SSBP3-201ENST00000326956 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
SSBP3-201ENST00000326956 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
SSBP3-201ENST00000326956 A0A087WYN8 130 aa10.33□□□□□ -0.76
SSBP3-201ENST00000326956 C14orf132Q9NPU4 83 aa10.33□□□□□ -0.76
SSBP3-201ENST00000326956 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
SSBP3-201ENST00000326956 WIPF1O43516 503 aa10.33□□□□□ -0.76
SSBP3-201ENST00000326956 CCL18P55774 89 aa10.33□□□□□ -0.76
SSBP3-201ENST00000326956 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
SSBP3-201ENST00000326956 C16orf74Q96GX8 76 aa10.32□□□□□ -0.76
SSBP3-201ENST00000326956 LECT2O14960 151 aa10.32□□□□□ -0.76
SSBP3-201ENST00000326956 NAV2Q8IVL1 2488 aa10.32□□□□□ -0.76
SSBP3-201ENST00000326956 IBA57-AS1B1ANH7 110 aa10.31□□□□□ -0.76
SSBP3-201ENST00000326956 CCL24O00175 119 aa10.31□□□□□ -0.76
SSBP3-201ENST00000326956 PTPN13Q12923 2485 aa10.31□□□□□ -0.76
SSBP3-201ENST00000326956 TRBV6-4A0A1B0GX49 114 aa10.31□□□□□ -0.76
SSBP3-201ENST00000326956 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
SSBP3-201ENST00000326956 LINC00526Q96FQ7 95 aa10.31□□□□□ -0.76
SSBP3-201ENST00000326956 ATOX1O00244 68 aa10.3□□□□□ -0.76
SSBP3-201ENST00000326956 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
SSBP3-201ENST00000326956 CFAP46Q8IYW2 2715 aa10.3□□□□□ -0.76
SSBP3-201ENST00000326956 C11orf68Q9H3H3 251 aaKnown RBP10.3□□□□□ -0.76
SSBP3-201ENST00000326956 IGLV4-60A0A075B6I1 120 aa10.3□□□□□ -0.76
SSBP3-201ENST00000326956 COX7CP15954 63 aa10.29□□□□□ -0.76
SSBP3-201ENST00000326956 CENPEQ02224 2701 aa10.29□□□□□ -0.76
SSBP3-201ENST00000326956 JMJD1CQ15652 2540 aa10.29□□□□□ -0.76
SSBP3-201ENST00000326956 PIEZO1Q92508 2521 aa10.29□□□□□ -0.76
SSBP3-201ENST00000326956 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
SSBP3-201ENST00000326956 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-201ENST00000326956 LRRC75A-AS1Q8N1F1 130 aa10.29□□□□□ -0.76
SSBP3-201ENST00000326956 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
SSBP3-201ENST00000326956 SONP18583 2426 aaKnown RBP10.28□□□□□ -0.76
SSBP3-201ENST00000326956 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
SSBP3-201ENST00000326956 IGKV3D-7A0A0C4DH55 119 aa10.28□□□□□ -0.76
SSBP3-201ENST00000326956 CHD6Q8TD26 2715 aa10.28□□□□□ -0.76
SSBP3-201ENST00000326956 C5orf47Q569G3 176 aa10.27□□□□□ -0.76
SSBP3-201ENST00000326956 A0A087WZ39 114 aa10.27□□□□□ -0.77
SSBP3-201ENST00000326956 F8WDY8 70 aa10.26□□□□□ -0.77
SSBP3-201ENST00000326956 NCR3O14931 201 aa10.26□□□□□ -0.77
SSBP3-201ENST00000326956 TMEM86BQ8N661 226 aa10.26□□□□□ -0.77
SSBP3-201ENST00000326956 KLK5Q9Y337 293 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-201ENST00000326956 SLPIP03973 132 aa10.26□□□□□ -0.77
SSBP3-201ENST00000326956 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
SSBP3-201ENST00000326956 ORMDL1Q9P0S3 153 aa10.26□□□□□ -0.77
SSBP3-201ENST00000326956 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
SSBP3-201ENST00000326956 SETD2Q9BYW2 2564 aaPredicted RBP10.25□□□□□ -0.77
SSBP3-201ENST00000326956 EPG5Q9HCE0 2579 aa10.25□□□□□ -0.77
SSBP3-201ENST00000326956 LINC00846Q9NV44 126 aa10.25□□□□□ -0.77
SSBP3-201ENST00000326956 LRRK2Q5S007 2527 aa10.25□□□□□ -0.77
SSBP3-201ENST00000326956 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
SSBP3-201ENST00000326956 CR1P17927 2039 aa10.24□□□□□ -0.77
SSBP3-201ENST00000326956 A0A1B0GX51 115 aa10.24□□□□□ -0.77
SSBP3-201ENST00000326956 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
SSBP3-201ENST00000326956 Q6JHZ5 121 aa10.24□□□□□ -0.77
SSBP3-201ENST00000326956 XCL1P47992 114 aa10.23□□□□□ -0.77
SSBP3-201ENST00000326956 TEX15Q9BXT5 2789 aa10.23□□□□□ -0.77
SSBP3-201ENST00000326956 UTP20O75691 2785 aaKnown RBP10.23□□□□□ -0.77
SSBP3-201ENST00000326956 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
SSBP3-201ENST00000326956 PLAC8L1A1L4L8 177 aa10.23□□□□□ -0.77
SSBP3-201ENST00000326956 SS18Q15532 418 aa10.23□□□□□ -0.77
SSBP3-201ENST00000326956 DEFB113Q30KQ7 82 aa10.23□□□□□ -0.77
SSBP3-201ENST00000326956 IGSF10Q6WRI0 2623 aa10.23□□□□□ -0.77
SSBP3-201ENST00000326956 GIG44P09565 113 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-201ENST00000326956 PLA2G2AP14555 144 aa10.22□□□□□ -0.77
SSBP3-201ENST00000326956 FHL2Q14192 279 aa10.22□□□□□ -0.77
SSBP3-201ENST00000326956 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
SSBP3-201ENST00000326956 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
SSBP3-201ENST00000326956 CSMD2Q7Z408 3487 aa10.21□□□□□ -0.77
SSBP3-201ENST00000326956 hADV29S1A0JD25 119 aa10.21□□□□□ -0.78
SSBP3-201ENST00000326956 DNAJC9-AS1A6NH13 148 aa10.21□□□□□ -0.78
SSBP3-201ENST00000326956 HIST1H4AP62805 103 aaKnown RBP10.21□□□□□ -0.78
SSBP3-201ENST00000326956 CRYGAP11844 174 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms