RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 MTORP42345 2549 aa10.23□□□□□ -0.77
CHRNA3-201ENST00000326828 B4DSR2 109 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 UBE2L6O14933 153 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 UCNP55089 124 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 NTM-AS1Q6ZSK4 140 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 TMEM126AQ9H061 195 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 MALP21145 153 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 SETXQ7Z333 2677 aaKnown RBP10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 SND1-IT1Q9HBX3 110 aa10.22□□□□□ -0.77
CHRNA3-201ENST00000326828 AKAP9Q99996 3911 aa10.21□□□□□ -0.77
CHRNA3-201ENST00000326828 IGLV5-39A0A0G2JS06 123 aa10.21□□□□□ -0.77
CHRNA3-201ENST00000326828 LOC100131303A0A0U1RQF7 123 aa10.21□□□□□ -0.77
CHRNA3-201ENST00000326828 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.77
CHRNA3-201ENST00000326828 MAP6D1Q9H9H5 199 aa10.21□□□□□ -0.77
CHRNA3-201ENST00000326828 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
CHRNA3-201ENST00000326828 INSP01308 110 aa10.21□□□□□ -0.78
CHRNA3-201ENST00000326828 RPL36AP83881 106 aaKnown RBP10.21□□□□□ -0.78
CHRNA3-201ENST00000326828 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.78
CHRNA3-201ENST00000326828 TMEM89A2RUT3 159 aa10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 NCR3O14931 201 aa10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 GCN1Q92616 2671 aaKnown RBP10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 HIST2H2BCQ6DN03 193 aa10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 UQCRQO14949 82 aa10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 LECT2O14960 151 aa10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 PLA2G2AP14555 144 aa10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 CYSTM1Q9H1C7 97 aa10.2□□□□□ -0.78
CHRNA3-201ENST00000326828 IGLV5-45A0A087WSX0 123 aa10.19□□□□□ -0.78
CHRNA3-201ENST00000326828 PAX4O43316 350 aa10.19□□□□□ -0.78
CHRNA3-201ENST00000326828 TRACP01848 142 aa10.19□□□□□ -0.78
CHRNA3-201ENST00000326828 BEAN1Q3B7T3 259 aa10.19□□□□□ -0.78
CHRNA3-201ENST00000326828 C5orf38Q86SI9 138 aa10.19□□□□□ -0.78
CHRNA3-201ENST00000326828 NOP10Q9NPE3 64 aaKnown RBP10.19□□□□□ -0.78
CHRNA3-201ENST00000326828 SMIM11BQ8TCY0 68 aa10.18□□□□□ -0.78
CHRNA3-201ENST00000326828 A0A1B0GX51 115 aa10.18□□□□□ -0.78
CHRNA3-201ENST00000326828 HIST1H4AP62805 103 aaKnown RBP10.18□□□□□ -0.78
CHRNA3-201ENST00000326828 PEMTQ9UBM1 199 aa10.18□□□□□ -0.78
CHRNA3-201ENST00000326828 INAFM2P0DMQ5 153 aa10.18□□□□□ -0.78
CHRNA3-201ENST00000326828 IMUPQ9GZP8 106 aa10.18□□□□□ -0.78
CHRNA3-201ENST00000326828 STHQ8IWL8 128 aa10.17□□□□□ -0.78
CHRNA3-201ENST00000326828 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
CHRNA3-201ENST00000326828 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
CHRNA3-201ENST00000326828 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
CHRNA3-201ENST00000326828 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
CHRNA3-201ENST00000326828 TRGV2A0A075B6R0 118 aa10.16□□□□□ -0.78
CHRNA3-201ENST00000326828 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
CHRNA3-201ENST00000326828 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
CHRNA3-201ENST00000326828 LINC00846Q9NV44 126 aa10.16□□□□□ -0.78
CHRNA3-201ENST00000326828 ACANP16112 2415 aa10.16□□□□□ -0.78
CHRNA3-201ENST00000326828 F5H768 121 aa10.16□□□□□ -0.78
CHRNA3-201ENST00000326828 TRAV13-2A0A0B4J235 113 aa10.15□□□□□ -0.78
CHRNA3-201ENST00000326828 K7EQD1 137 aa10.15□□□□□ -0.78
CHRNA3-201ENST00000326828 LINC00526Q96FQ7 95 aa10.15□□□□□ -0.78
CHRNA3-201ENST00000326828 COX7CP15954 63 aa10.15□□□□□ -0.78
CHRNA3-201ENST00000326828 CLPSL2Q6UWE3 100 aa10.15□□□□□ -0.78
CHRNA3-201ENST00000326828 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
CHRNA3-201ENST00000326828 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
CHRNA3-201ENST00000326828 KIR2DL5BQ8NHK3 375 aa10.14□□□□□ -0.79
CHRNA3-201ENST00000326828 C1orf158Q8N1D5 194 aa10.14□□□□□ -0.79
CHRNA3-201ENST00000326828 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
CHRNA3-201ENST00000326828 WFDC10AQ9H1F0 79 aa10.14□□□□□ -0.79
CHRNA3-201ENST00000326828 NOTCH2Q04721 2471 aa10.13□□□□□ -0.79
CHRNA3-201ENST00000326828 APCP25054 2843 aa10.13□□□□□ -0.79
CHRNA3-201ENST00000326828 CCL18P55774 89 aa10.13□□□□□ -0.79
CHRNA3-201ENST00000326828 PRR3P79522 188 aaKnown RBP10.13□□□□□ -0.79
CHRNA3-201ENST00000326828 RPL35AP18077 110 aaKnown RBP10.12□□□□□ -0.79
CHRNA3-201ENST00000326828 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
CHRNA3-201ENST00000326828 FAM19A5Q7Z5A7 132 aaPredicted RBP10.12□□□□□ -0.79
CHRNA3-201ENST00000326828 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
CHRNA3-201ENST00000326828 ODF3L2Q3SX64 289 aa10.11□□□□□ -0.79
CHRNA3-201ENST00000326828 DSCR8Q96T75 97 aa10.11□□□□□ -0.79
CHRNA3-201ENST00000326828 RPL28P46779 137 aaKnown RBP10.11□□□□□ -0.79
CHRNA3-201ENST00000326828 DEFB114Q30KQ6 69 aa10.11□□□□□ -0.79
CHRNA3-201ENST00000326828 CSDC2Q9Y534 153 aaKnown RBP10.11□□□□□ -0.79
CHRNA3-201ENST00000326828 CXCL5P42830 114 aa10.1□□□□□ -0.79
CHRNA3-201ENST00000326828 HILS1P60008 231 aa10.1□□□□□ -0.79
CHRNA3-201ENST00000326828 LINC01356Q8N9X3 169 aa10.1□□□□□ -0.79
CHRNA3-201ENST00000326828 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
CHRNA3-201ENST00000326828 ATOX1O00244 68 aa10.1□□□□□ -0.79
CHRNA3-201ENST00000326828 C2orf48Q96LS8 159 aa10.1□□□□□ -0.79
CHRNA3-201ENST00000326828 A0A096LPF7 62 aa10.09□□□□□ -0.79
CHRNA3-201ENST00000326828 XCL1P47992 114 aa10.09□□□□□ -0.79
CHRNA3-201ENST00000326828 LRRC75A-AS1Q8N1F1 130 aa10.09□□□□□ -0.79
CHRNA3-201ENST00000326828 J3KT08 172 aa10.09□□□□□ -0.79
CHRNA3-201ENST00000326828 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
CHRNA3-201ENST00000326828 RPL18AQ02543 176 aaKnown RBP10.08□□□□□ -0.8
CHRNA3-201ENST00000326828 FAM222AQ5U5X8 452 aa10.08□□□□□ -0.8
CHRNA3-201ENST00000326828 RNF152Q8N8N0 203 aa10.07□□□□□ -0.8
CHRNA3-201ENST00000326828 PRORYQ9H606 182 aa10.07□□□□□ -0.8
CHRNA3-201ENST00000326828 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
CHRNA3-201ENST00000326828 USP17L23D6RBM5 183 aa10.06□□□□□ -0.8
CHRNA3-201ENST00000326828 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
CHRNA3-201ENST00000326828 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
CHRNA3-201ENST00000326828 HIVEP2P31629 2446 aa10.06□□□□□ -0.8
CHRNA3-201ENST00000326828 LINC01561Q8N1V8 128 aa10.05□□□□□ -0.8
CHRNA3-201ENST00000326828 PRB1P04280 392 aa10.04□□□□□ -0.8
CHRNA3-201ENST00000326828 Q6YL49 198 aa10.04□□□□□ -0.8
CHRNA3-201ENST00000326828 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
CHRNA3-201ENST00000326828 PF4P02776 101 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms