RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 DPH3P1Q9H4G8 78 aa0.83□□□□□ -2.28
CBX3P1-201ENST00000325243 NXT2Q9NPJ8 142 aaKnown RBP0.83□□□□□ -2.28
CBX3P1-201ENST00000325243 HIGD1BQ9P298 99 aa0.83□□□□□ -2.28
CBX3P1-201ENST00000325243 PDE4DIPQ5VU43 2346 aa0.83□□□□□ -2.28
CBX3P1-201ENST00000325243 KCPQ6ZWJ8 1503 aa0.83□□□□□ -2.28
CBX3P1-201ENST00000325243 MUC22E2RYF6 1773 aaPredicted RBP0.83□□□□□ -2.28
CBX3P1-201ENST00000325243 TNRC6BQ9UPQ9 1833 aaKnown RBP0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 TNRC6CQ9HCJ0 1690 aaKnown RBP0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 CACNA1GO43497 2377 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 A0A087WSZ3 146 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 TRBV6-8A0A0A6YYG3 113 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 IGHV1-24A0A0C4DH33 117 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 TRBV6-5A0A0K0K1A5 114 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 UBE2L5PA0A1B0GUS4 154 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 F2Z2F3 143 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 J3QLW9 94 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 LEPROTL1O95214 131 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 ACYP1P07311 99 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 GCHFRP30047 84 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 S100A3P33764 101 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 ATP5EP56381 51 aaPredicted RBP0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 SMIM11AP58511 58 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 CCL8P80075 99 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 MRPS36P82909 103 aaKnown RBP0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 INSL4Q14641 139 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 ZNF56Q15929 161 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 KRTAP21-3Q3LHN1 58 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 C10orf55Q5SWW7 151 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 TMEM170BQ5T4T1 132 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 MIC13Q5XKP0 118 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 KRTAP26-1Q6PEX3 210 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 SBSPONQ8IVN8 264 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 LINC00269Q8N2A0 174 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 Q8N2B8 174 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 SERP2Q8N6R1 65 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 ZNF563Q8TA94 476 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 TMEM254Q8TBM7 123 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 MYOZ3Q8TDC0 251 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 ODF3Q96PU9 254 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 TRGV9Q99603 122 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 KNTC1P50748 2209 aa0.82□□□□□ -2.28
CBX3P1-201ENST00000325243 CADP27708 2225 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 TRAV17A0A0B4J275 112 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 LOC107984156A0A0G2JMH3 177 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 MYMXA0A1B0GTQ4 84 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 CTXND1A0A1B0GTU2 59 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 A0A1B0GWA3 101 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 CRYM-AS1A6NIL9 109 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 CCL16O15467 120 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 ERC2-IT1O76042 136 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 CCL4P13236 92 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 FCER1GP30273 86 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 CKS2P33552 79 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 EFNA4P52798 201 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 FXYD6P3P58550 94 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 RPL38P63173 70 aaKnown RBP0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 SERF2P84101 59 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 RBM3P98179 157 aaKnown RBP0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 CIRBPQ14011 172 aaKnown RBP0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 ATXN8Q156A1 80 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 S100A7L2Q5SY68 101 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 ZNF833PQ6ZTB9 187 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 RPS27LQ71UM5 84 aaKnown RBP0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 C5orf38Q86SI9 138 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 LINC00643Q86TS7 51 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 ARL17AQ8IVW1 177 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 SPTSSAQ969W0 71 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 BPTFQ12830 3046 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 RTTNQ86VV8 2226 aa0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 ZFHX2Q9C0A1 2572 aaPredicted RBP0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 URB1O60287 2271 aaKnown RBP0.81□□□□□ -2.28
CBX3P1-201ENST00000325243 COL1A1P02452 1464 aaPredicted RBP0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 CD163L1Q9NR16 1453 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 USF3Q68DE3 2245 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 ICE1Q9Y2F5 2266 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 LINC01549A6NIU2 74 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 A6NN06 94 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 NDUFC1O43677 76 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 PPYP01298 95 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 CXCL8P10145 99 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 UBE2D3P61077 147 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 UBE2D2P62837 147 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 MIR22HGQ0VDD5 57 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 DEFB121Q5J5C9 76 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 C2orf82Q6UX34 121 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 Q8N8P6 123 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 IFI27L1Q96BM0 104 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 LINC01600Q96MT4 127 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 DYNLRB1Q9NP97 96 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 TIMM8BQ9Y5J9 83 aaPredicted RBP0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 ASCC3Q8N3C0 2202 aaKnown RBP0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 DOPEY2Q9Y3R5 2298 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 CNTRLQ7Z7A1 2325 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 PTPRQQ9UMZ3 2332 aa0.8□□□□□ -2.28
CBX3P1-201ENST00000325243 FN1P02751 2386 aaKnown RBP0.79□□□□□ -2.28
CBX3P1-201ENST00000325243 COL4A6Q14031 1691 aa0.79□□□□□ -2.28
CBX3P1-201ENST00000325243 TRBV7-3A0A075B6L6 115 aa0.79□□□□□ -2.28
CBX3P1-201ENST00000325243 TRBV25-1A0A075B6N4 114 aa0.79□□□□□ -2.28
CBX3P1-201ENST00000325243 TRGV2A0A075B6R0 118 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms