RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 NDUFV3P56181 108 aaKnown RBP14.15□□□□□ -0.14
CRLF3-201ENST00000324238 GAGE7O76087 117 aa14.15□□□□□ -0.14
CRLF3-201ENST00000324238 GAGE12FP0CL80 117 aa14.15□□□□□ -0.14
CRLF3-201ENST00000324238 GAGE12GP0CL81 117 aa14.15□□□□□ -0.14
CRLF3-201ENST00000324238 GAGE12IP0CL82 117 aa14.15□□□□□ -0.14
CRLF3-201ENST00000324238 TIRAPP58753 221 aa14.15□□□□□ -0.14
CRLF3-201ENST00000324238 CCL24O00175 119 aa14.14□□□□□ -0.15
CRLF3-201ENST00000324238 DNAJC30Q96LL9 226 aa14.14□□□□□ -0.15
CRLF3-201ENST00000324238 KRTAP1-3Q8IUG1 177 aa14.14□□□□□ -0.15
CRLF3-201ENST00000324238 RPL36AP83881 106 aaKnown RBP14.13□□□□□ -0.15
CRLF3-201ENST00000324238 RPL36ALQ969Q0 106 aaKnown RBP14.13□□□□□ -0.15
CRLF3-201ENST00000324238 C3orf56Q8N813 242 aa14.13□□□□□ -0.15
CRLF3-201ENST00000324238 UNC79Q9P2D8 2635 aa14.13□□□□□ -0.15
CRLF3-201ENST00000324238 HERVK_113P63121 156 aa14.13□□□□□ -0.15
CRLF3-201ENST00000324238 IGLV5-45A0A087WSX0 123 aa14.12□□□□□ -0.15
CRLF3-201ENST00000324238 M0QXV9 152 aa14.12□□□□□ -0.15
CRLF3-201ENST00000324238 K7EQD1 137 aa14.12□□□□□ -0.15
CRLF3-201ENST00000324238 IGLV5-39A0A0G2JS06 123 aa14.11□□□□□ -0.15
CRLF3-201ENST00000324238 Q9HAA7 133 aa14.11□□□□□ -0.15
CRLF3-201ENST00000324238 GAGE6Q13070 117 aa14.11□□□□□ -0.15
CRLF3-201ENST00000324238 TRGV2A0A075B6R0 118 aa14.1□□□□□ -0.15
CRLF3-201ENST00000324238 IFITM1P13164 125 aa14.1□□□□□ -0.15
CRLF3-201ENST00000324238 FAM218AQ96MZ4 157 aa14.1□□□□□ -0.15
CRLF3-201ENST00000324238 CDC42SE2Q9NRR3 84 aa14.1□□□□□ -0.15
CRLF3-201ENST00000324238 H3BT86 120 aa14.1□□□□□ -0.15
CRLF3-201ENST00000324238 C11orf68Q9H3H3 251 aaKnown RBP14.09□□□□□ -0.15
CRLF3-201ENST00000324238 PDZD2O15018 2839 aa14.09□□□□□ -0.15
CRLF3-201ENST00000324238 UBE2L6O14933 153 aa14.08□□□□□ -0.16
CRLF3-201ENST00000324238 F5H768 121 aa14.08□□□□□ -0.16
CRLF3-201ENST00000324238 TIMM17BO60830 172 aa14.08□□□□□ -0.16
CRLF3-201ENST00000324238 CHCHD5Q9BSY4 110 aa14.07□□□□□ -0.16
CRLF3-201ENST00000324238 GIG44P09565 113 aaPredicted RBP14.05□□□□□ -0.16
CRLF3-201ENST00000324238 SMR3AQ99954 134 aa14.05□□□□□ -0.16
CRLF3-201ENST00000324238 IGLV4-60A0A075B6I1 120 aa14.05□□□□□ -0.16
CRLF3-201ENST00000324238 COX7A2LO14548 114 aa14.04□□□□□ -0.16
CRLF3-201ENST00000324238 DAZ2Q13117 558 aaKnown RBP14.04□□□□□ -0.16
CRLF3-201ENST00000324238 DAZ4Q86SG3 579 aaKnown RBP14.04□□□□□ -0.16
CRLF3-201ENST00000324238 DAZ3Q9NR90 486 aaKnown RBP14.04□□□□□ -0.16
CRLF3-201ENST00000324238 MIR7-3HGQ8N6C7 128 aa14.04□□□□□ -0.16
CRLF3-201ENST00000324238 BAALC-AS2P0C853 105 aa14.03□□□□□ -0.16
CRLF3-201ENST00000324238 PFN2P35080 140 aa14.03□□□□□ -0.16
CRLF3-201ENST00000324238 C5orf38Q86SI9 138 aa14.03□□□□□ -0.16
CRLF3-201ENST00000324238 TMEM243Q9BU79 118 aa14.03□□□□□ -0.16
CRLF3-201ENST00000324238 LINC01006Q8NI28 216 aa14.02□□□□□ -0.16
CRLF3-201ENST00000324238 TRGV4A0A0C4DH28 118 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 IL17DQ8TAD2 202 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 SMCR5Q8TEV8 140 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 TENM1Q9UKZ4 2725 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 LINC00158P58513 81 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 SHISA2Q6UWI4 295 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 LINC00337Q8N6G1 96 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 ATRQ13535 2644 aa14.01□□□□□ -0.17
CRLF3-201ENST00000324238 A0A096LPF7 62 aa14□□□□□ -0.17
CRLF3-201ENST00000324238 ATP5G1P05496 136 aa14□□□□□ -0.17
CRLF3-201ENST00000324238 CLPSL2Q6UWE3 100 aa14□□□□□ -0.17
CRLF3-201ENST00000324238 LINC01600Q96MT4 127 aa14□□□□□ -0.17
CRLF3-201ENST00000324238 PLAC8L1A1L4L8 177 aa13.99□□□□□ -0.17
CRLF3-201ENST00000324238 DEFB130BP0DP73 79 aa13.99□□□□□ -0.17
CRLF3-201ENST00000324238 DEFB130AP0DP74 79 aa13.99□□□□□ -0.17
CRLF3-201ENST00000324238 OTOGQ6ZRI0 2925 aa13.99□□□□□ -0.17
CRLF3-201ENST00000324238 TRBV10-1A0A0K0K1A3 114 aa13.98□□□□□ -0.17
CRLF3-201ENST00000324238 C9orf129Q5T035 196 aaKnown RBP13.98□□□□□ -0.17
CRLF3-201ENST00000324238 C22orf24Q9Y442 160 aa13.98□□□□□ -0.17
CRLF3-201ENST00000324238 COX7B2Q8TF08 81 aa13.97□□□□□ -0.17
CRLF3-201ENST00000324238 SND1-IT1Q9HBX3 110 aa13.97□□□□□ -0.17
CRLF3-201ENST00000324238 IGKV2-28A0A075B6P5 120 aa13.97□□□□□ -0.17
CRLF3-201ENST00000324238 IGKV2D-28P01615 120 aa13.97□□□□□ -0.17
CRLF3-201ENST00000324238 LRRC75A-AS1Q8N1F1 130 aa13.96□□□□□ -0.17
CRLF3-201ENST00000324238 CSDC2Q9Y534 153 aaKnown RBP13.95□□□□□ -0.18
CRLF3-201ENST00000324238 GAGE2AQ6NT46 116 aa13.95□□□□□ -0.18
CRLF3-201ENST00000324238 ANK3Q12955 4377 aaKnown RBP13.95□□□□□ -0.18
CRLF3-201ENST00000324238 A0A087WYN8 130 aa13.95□□□□□ -0.18
CRLF3-201ENST00000324238 CRPP02741 224 aa13.94□□□□□ -0.18
CRLF3-201ENST00000324238 DEFB121Q5J5C9 76 aa13.94□□□□□ -0.18
CRLF3-201ENST00000324238 FAM236AA0A1B0GUQ0 79 aa13.94□□□□□ -0.18
CRLF3-201ENST00000324238 FAM236BA0A1B0GV22 79 aa13.94□□□□□ -0.18
CRLF3-201ENST00000324238 SLPIP03973 132 aa13.93□□□□□ -0.18
CRLF3-201ENST00000324238 OR13C6PQ8NH95 151 aa13.93□□□□□ -0.18
CRLF3-201ENST00000324238 SMIM11BQ8TCY0 68 aa13.92□□□□□ -0.18
CRLF3-201ENST00000324238 XCL1P47992 114 aa13.92□□□□□ -0.18
CRLF3-201ENST00000324238 CCL18P55774 89 aa13.92□□□□□ -0.18
CRLF3-201ENST00000324238 DEFB4AO15263 64 aa13.91□□□□□ -0.18
CRLF3-201ENST00000324238 Q6Q795 121 aa13.91□□□□□ -0.18
CRLF3-201ENST00000324238 TRRAPQ9Y4A5 3859 aa13.91□□□□□ -0.18
CRLF3-201ENST00000324238 TRAV25A0A0B4J276 109 aa13.9□□□□□ -0.18
CRLF3-201ENST00000324238 PAX4O43316 350 aa13.9□□□□□ -0.18
CRLF3-201ENST00000324238 HERV-K104P63124 156 aa13.9□□□□□ -0.18
CRLF3-201ENST00000324238 PRR3P79522 188 aaKnown RBP13.9□□□□□ -0.18
CRLF3-201ENST00000324238 FAM19A3Q7Z5A8 133 aa13.9□□□□□ -0.18
CRLF3-201ENST00000324238 FAM240AA0A1B0GVK7 77 aa13.89□□□□□ -0.19
CRLF3-201ENST00000324238 FHL2Q14192 279 aa13.89□□□□□ -0.19
CRLF3-201ENST00000324238 TRBV6-8A0A0A6YYG3 113 aa13.89□□□□□ -0.19
CRLF3-201ENST00000324238 KRTAP1-1Q07627 177 aa13.89□□□□□ -0.19
CRLF3-201ENST00000324238 C16orf74Q96GX8 76 aa13.88□□□□□ -0.19
CRLF3-201ENST00000324238 C14orf132Q9NPU4 83 aa13.88□□□□□ -0.19
CRLF3-201ENST00000324238 IGHV3OR16-9A0A0B4J2B5 98 aa13.88□□□□□ -0.19
CRLF3-201ENST00000324238 TRACP01848 142 aa13.87□□□□□ -0.19
CRLF3-201ENST00000324238 SPATA3Q8NHX4 192 aa13.87□□□□□ -0.19
CRLF3-201ENST00000324238 C19orf73Q9NVV2 129 aa13.87□□□□□ -0.19
CRLF3-201ENST00000324238 TMEM86BQ8N661 226 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms