RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 GAGE10A6NGK3 116 aa11.86□□□□□ -0.51
SSR4-201ENST00000320857 FABP2P12104 132 aa11.86□□□□□ -0.51
SSR4-201ENST00000320857 IGLV5-39A0A0G2JS06 123 aa11.84□□□□□ -0.51
SSR4-201ENST00000320857 IGLL5B9A064 214 aa11.84□□□□□ -0.51
SSR4-201ENST00000320857 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
SSR4-201ENST00000320857 K7EP34 96 aa11.84□□□□□ -0.51
SSR4-201ENST00000320857 SMIM1B2RUZ4 78 aa11.83□□□□□ -0.52
SSR4-201ENST00000320857 F5H768 121 aa11.83□□□□□ -0.52
SSR4-201ENST00000320857 NDUFA1O15239 70 aa11.83□□□□□ -0.52
SSR4-201ENST00000320857 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
SSR4-201ENST00000320857 G3V4G9 280 aa11.82□□□□□ -0.52
SSR4-201ENST00000320857 RPL24P83731 157 aaKnown RBP11.82□□□□□ -0.52
SSR4-201ENST00000320857 SPCS1Q9Y6A9 102 aa11.82□□□□□ -0.52
SSR4-201ENST00000320857 A0A1B0GUV1 79 aa11.81□□□□□ -0.52
SSR4-201ENST00000320857 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
SSR4-201ENST00000320857 TIMM17BO60830 172 aa11.81□□□□□ -0.52
SSR4-201ENST00000320857 A0A096LPF7 62 aa11.81□□□□□ -0.52
SSR4-201ENST00000320857 SH2D6Q7Z4S9 175 aa11.81□□□□□ -0.52
SSR4-201ENST00000320857 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
SSR4-201ENST00000320857 LITAFQ99732 161 aa11.8□□□□□ -0.52
SSR4-201ENST00000320857 SPANXDQ9BXN6 97 aa11.8□□□□□ -0.52
SSR4-201ENST00000320857 SPANXCQ9NY87 97 aa11.8□□□□□ -0.52
SSR4-201ENST00000320857 NBEAL2Q6ZNJ1 2754 aa11.79□□□□□ -0.52
SSR4-201ENST00000320857 IGKV3OR2-268A0A0C4DH90 116 aa11.79□□□□□ -0.52
SSR4-201ENST00000320857 APOMO95445 188 aa11.79□□□□□ -0.52
SSR4-201ENST00000320857 HTN3P15516 51 aa11.79□□□□□ -0.52
SSR4-201ENST00000320857 RBX1P62877 108 aa11.79□□□□□ -0.52
SSR4-201ENST00000320857 MUSTN1Q8IVN3 82 aa11.79□□□□□ -0.52
SSR4-201ENST00000320857 PGPEP1Q9NXJ5 209 aa11.78□□□□□ -0.52
SSR4-201ENST00000320857 ICOSQ9Y6W8 199 aa11.78□□□□□ -0.52
SSR4-201ENST00000320857 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.78□□□□□ -0.52
SSR4-201ENST00000320857 CIRBPQ14011 172 aaKnown RBP11.78□□□□□ -0.52
SSR4-201ENST00000320857 Q9H8V8 135 aa11.78□□□□□ -0.52
SSR4-201ENST00000320857 RETNQ9HD89 108 aa11.78□□□□□ -0.52
SSR4-201ENST00000320857 A4D1N5 150 aa11.77□□□□□ -0.53
SSR4-201ENST00000320857 CFC1BP0CG36 223 aa11.77□□□□□ -0.53
SSR4-201ENST00000320857 CFC1P0CG37 223 aa11.77□□□□□ -0.53
SSR4-201ENST00000320857 MIAQ16674 131 aa11.77□□□□□ -0.53
SSR4-201ENST00000320857 LINC00959A0A1B0GUT2 108 aa11.76□□□□□ -0.53
SSR4-201ENST00000320857 PRSS2P07478 247 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 HERV-K104P63124 156 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 SS18Q15532 418 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 C11orf68Q9H3H3 251 aaKnown RBP11.75□□□□□ -0.53
SSR4-201ENST00000320857 IGHV3OR16-9A0A0B4J2B5 98 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 A0A0B4J2C4 111 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 IFITM1P13164 125 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
SSR4-201ENST00000320857 DNAH3Q8TD57 4116 aa11.74□□□□□ -0.53
SSR4-201ENST00000320857 TSPAN13O95857 204 aa11.74□□□□□ -0.53
SSR4-201ENST00000320857 ZNF625Q96I27 306 aaPredicted RBP11.74□□□□□ -0.53
SSR4-201ENST00000320857 A0A087WZ39 114 aa11.73□□□□□ -0.53
SSR4-201ENST00000320857 PRB2P02812 416 aaPredicted RBP11.73□□□□□ -0.53
SSR4-201ENST00000320857 LELP1Q5T871 98 aa11.73□□□□□ -0.53
SSR4-201ENST00000320857 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
SSR4-201ENST00000320857 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
SSR4-201ENST00000320857 LYRM7Q5U5X0 104 aa11.72□□□□□ -0.53
SSR4-201ENST00000320857 COPS9Q8WXC6 57 aa11.71□□□□□ -0.53
SSR4-201ENST00000320857 H3BNG1 76 aa11.71□□□□□ -0.54
SSR4-201ENST00000320857 MEIG1Q5JSS6 88 aa11.7□□□□□ -0.54
SSR4-201ENST00000320857 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
SSR4-201ENST00000320857 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
SSR4-201ENST00000320857 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
SSR4-201ENST00000320857 XCL1P47992 114 aa11.68□□□□□ -0.54
SSR4-201ENST00000320857 LINC00269Q8N2A0 174 aa11.68□□□□□ -0.54
SSR4-201ENST00000320857 TOMM7Q9P0U1 55 aa11.68□□□□□ -0.54
SSR4-201ENST00000320857 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
SSR4-201ENST00000320857 IGHV3-33P01772 117 aa11.68□□□□□ -0.54
SSR4-201ENST00000320857 SFTA2Q6UW10 78 aa11.68□□□□□ -0.54
SSR4-201ENST00000320857 CLPSL2Q6UWE3 100 aa11.68□□□□□ -0.54
SSR4-201ENST00000320857 LOC107984156A0A0G2JMH3 177 aa11.67□□□□□ -0.54
SSR4-201ENST00000320857 EIF4EBP3O60516 100 aaPredicted RBP11.67□□□□□ -0.54
SSR4-201ENST00000320857 NPC2P61916 151 aa11.67□□□□□ -0.54
SSR4-201ENST00000320857 ARL17AQ8IVW1 177 aa11.67□□□□□ -0.54
SSR4-201ENST00000320857 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
SSR4-201ENST00000320857 KPRPQ5T749 579 aaPredicted RBP11.66□□□□□ -0.54
SSR4-201ENST00000320857 Q6ZTC4 211 aa11.66□□□□□ -0.54
SSR4-201ENST00000320857 DAND5Q8N907 189 aa11.66□□□□□ -0.54
SSR4-201ENST00000320857 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
SSR4-201ENST00000320857 NOTCH1P46531 2555 aa11.66□□□□□ -0.54
SSR4-201ENST00000320857 A0A0J9YWU9 116 aa11.65□□□□□ -0.54
SSR4-201ENST00000320857 REG3AQ06141 175 aa11.65□□□□□ -0.54
SSR4-201ENST00000320857 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
SSR4-201ENST00000320857 LYPD5Q6UWN5 251 aa11.65□□□□□ -0.54
SSR4-201ENST00000320857 K7EIL1 84 aa11.65□□□□□ -0.55
SSR4-201ENST00000320857 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.55
SSR4-201ENST00000320857 A0A0U1RRA0 63 aa11.64□□□□□ -0.55
SSR4-201ENST00000320857 CHCHD10Q8WYQ3 142 aaPredicted RBP11.64□□□□□ -0.55
SSR4-201ENST00000320857 H3BMG7 143 aa11.63□□□□□ -0.55
SSR4-201ENST00000320857 SCGB1C2P0DMR2 95 aa11.63□□□□□ -0.55
SSR4-201ENST00000320857 PSMB2P49721 201 aa11.63□□□□□ -0.55
SSR4-201ENST00000320857 Q1RN00 199 aa11.63□□□□□ -0.55
SSR4-201ENST00000320857 C11orf45Q8TAV5 145 aa11.63□□□□□ -0.55
SSR4-201ENST00000320857 SPATA25Q9BR10 227 aa11.63□□□□□ -0.55
SSR4-201ENST00000320857 TRBV20-1A0A075B6N2 111 aa11.62□□□□□ -0.55
SSR4-201ENST00000320857 F8W1H4 67 aa11.62□□□□□ -0.55
SSR4-201ENST00000320857 H7C2G1 150 aa11.62□□□□□ -0.55
SSR4-201ENST00000320857 COX7A2LO14548 114 aa11.62□□□□□ -0.55
SSR4-201ENST00000320857 Q8N3U1 123 aa11.62□□□□□ -0.55
SSR4-201ENST00000320857 C6orf226Q5I0X4 101 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms