RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 CAMK2N2Q96S95 79 aa13.25□□□□□ -0.29
SLC12A4-201ENST00000316341 WFDC9Q8NEX5 89 aa13.25□□□□□ -0.29
SLC12A4-201ENST00000316341 AMELXQ99217 191 aa13.25□□□□□ -0.29
SLC12A4-201ENST00000316341 UPK3BQ9BT76 320 aa13.25□□□□□ -0.29
SLC12A4-201ENST00000316341 Q6Q795 121 aa13.24□□□□□ -0.29
SLC12A4-201ENST00000316341 SCXQ7RTU7 201 aa13.24□□□□□ -0.29
SLC12A4-201ENST00000316341 PRB2P02812 416 aaPredicted RBP13.24□□□□□ -0.29
SLC12A4-201ENST00000316341 ZNF702PQ9H963 129 aa13.24□□□□□ -0.29
SLC12A4-201ENST00000316341 FRYLO94915 3013 aa13.24□□□□□ -0.29
SLC12A4-201ENST00000316341 SMIM1B2RUZ4 78 aa13.24□□□□□ -0.29
SLC12A4-201ENST00000316341 ACANP16112 2415 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 IBA57-AS1B1ANH7 110 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 F8WEM9 126 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 IGKV2D-24A0A075B6R9 120 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 TRBV6-8A0A0A6YYG3 113 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 APOC4P55056 127 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 LINC00526Q96FQ7 95 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 IMUPQ9GZP8 106 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 A0A087WVE0 104 aa13.23□□□□□ -0.29
SLC12A4-201ENST00000316341 USP17L23D6RBM5 183 aa13.22□□□□□ -0.29
SLC12A4-201ENST00000316341 C6orf99Q4VX62 202 aa13.22□□□□□ -0.29
SLC12A4-201ENST00000316341 CDC42SE2Q9NRR3 84 aa13.21□□□□□ -0.29
SLC12A4-201ENST00000316341 Q9UF83 564 aa13.21□□□□□ -0.29
SLC12A4-201ENST00000316341 PRO0255Q9UI72 69 aa13.21□□□□□ -0.29
SLC12A4-201ENST00000316341 DNAJC9-AS1A6NH13 148 aa13.21□□□□□ -0.29
SLC12A4-201ENST00000316341 CCL18P55774 89 aa13.21□□□□□ -0.29
SLC12A4-201ENST00000316341 KLK5Q9Y337 293 aaPredicted RBP13.21□□□□□ -0.29
SLC12A4-201ENST00000316341 FAM240AA0A1B0GVK7 77 aa13.2□□□□□ -0.3
SLC12A4-201ENST00000316341 C1orf43Q9BWL3 253 aa13.2□□□□□ -0.3
SLC12A4-201ENST00000316341 COX7CP15954 63 aa13.2□□□□□ -0.3
SLC12A4-201ENST00000316341 CXCL5P42830 114 aa13.19□□□□□ -0.3
SLC12A4-201ENST00000316341 DOPEY1Q5JWR5 2465 aa13.19□□□□□ -0.3
SLC12A4-201ENST00000316341 IGHV4-31P0DP07 118 aa13.19□□□□□ -0.3
SLC12A4-201ENST00000316341 FRYQ5TBA9 3013 aa13.19□□□□□ -0.3
SLC12A4-201ENST00000316341 XAGE1AQ9HD64 81 aa13.18□□□□□ -0.3
SLC12A4-201ENST00000316341 CHCHD10Q8WYQ3 142 aaPredicted RBP13.18□□□□□ -0.3
SLC12A4-201ENST00000316341 NREPQ16612 68 aa13.17□□□□□ -0.3
SLC12A4-201ENST00000316341 REG3AQ06141 175 aa13.17□□□□□ -0.3
SLC12A4-201ENST00000316341 DIRC1Q969H9 104 aa13.17□□□□□ -0.3
SLC12A4-201ENST00000316341 HIGD2BQ4VC39 106 aa13.16□□□□□ -0.3
SLC12A4-201ENST00000316341 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
SLC12A4-201ENST00000316341 A0A087WYN8 130 aa13.16□□□□□ -0.3
SLC12A4-201ENST00000316341 SERP2Q8N6R1 65 aa13.16□□□□□ -0.3
SLC12A4-201ENST00000316341 ODF3L2Q3SX64 289 aa13.15□□□□□ -0.3
SLC12A4-201ENST00000316341 ZNF462Q96JM2 2506 aa13.15□□□□□ -0.3
SLC12A4-201ENST00000316341 TRBV6-4A0A1B0GX49 114 aa13.15□□□□□ -0.3
SLC12A4-201ENST00000316341 PRR3P79522 188 aaKnown RBP13.15□□□□□ -0.3
SLC12A4-201ENST00000316341 MAP1AP78559 2803 aaPredicted RBP13.15□□□□□ -0.31
SLC12A4-201ENST00000316341 FHL3Q13643 280 aa13.14□□□□□ -0.31
SLC12A4-201ENST00000316341 Q8N2B8 174 aa13.13□□□□□ -0.31
SLC12A4-201ENST00000316341 SPART-AS1P0CW21 52 aa13.13□□□□□ -0.31
SLC12A4-201ENST00000316341 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
SLC12A4-201ENST00000316341 BBC3Q96PG8 261 aaPredicted RBP13.13□□□□□ -0.31
SLC12A4-201ENST00000316341 LINC00959A0A1B0GUT2 108 aa13.12□□□□□ -0.31
SLC12A4-201ENST00000316341 M0QXV9 152 aa13.12□□□□□ -0.31
SLC12A4-201ENST00000316341 DEFB121Q5J5C9 76 aa13.12□□□□□ -0.31
SLC12A4-201ENST00000316341 IGLV4-60A0A075B6I1 120 aa13.12□□□□□ -0.31
SLC12A4-201ENST00000316341 LRRC75A-AS1Q8N1F1 130 aa13.12□□□□□ -0.31
SLC12A4-201ENST00000316341 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
SLC12A4-201ENST00000316341 CENPEQ02224 2701 aa13.11□□□□□ -0.31
SLC12A4-201ENST00000316341 FAM19A4Q96LR4 140 aa13.11□□□□□ -0.31
SLC12A4-201ENST00000316341 PSCAO43653 123 aa13.1□□□□□ -0.31
SLC12A4-201ENST00000316341 SNURFQ9Y675 71 aa13.1□□□□□ -0.31
SLC12A4-201ENST00000316341 TMEM258P61165 79 aa13.1□□□□□ -0.31
SLC12A4-201ENST00000316341 Q6ZQY7 126 aa13.09□□□□□ -0.31
SLC12A4-201ENST00000316341 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
SLC12A4-201ENST00000316341 LOC107984640A0A0U1RRK4 108 aa13.09□□□□□ -0.31
SLC12A4-201ENST00000316341 FUSP35637 526 aaKnown RBP eCLIP13.09□□□□□ -0.314e-6■□□□□ 11.3
SLC12A4-201ENST00000316341 COX7BP24311 80 aa13.09□□□□□ -0.31
SLC12A4-201ENST00000316341 UBE2BP63146 152 aa13.09□□□□□ -0.31
SLC12A4-201ENST00000316341 COL27A1Q8IZC6 1860 aaPredicted RBP13.08□□□□□ -0.31
SLC12A4-201ENST00000316341 FAM236DA0A1B0GTK5 79 aa13.08□□□□□ -0.31
SLC12A4-201ENST00000316341 FAM236CP0DP71 79 aa13.08□□□□□ -0.31
SLC12A4-201ENST00000316341 RPL28P46779 137 aaKnown RBP13.08□□□□□ -0.32
SLC12A4-201ENST00000316341 C9orf116Q5BN46 136 aaPredicted RBP13.08□□□□□ -0.32
SLC12A4-201ENST00000316341 PRORYQ9H606 182 aa13.08□□□□□ -0.32
SLC12A4-201ENST00000316341 PLA2G2AP14555 144 aa13.07□□□□□ -0.32
SLC12A4-201ENST00000316341 MUC4Q99102 2169 aa13.07□□□□□ -0.32
SLC12A4-201ENST00000316341 ETDCA0A1B0GVM5 59 aa13.07□□□□□ -0.32
SLC12A4-201ENST00000316341 SBSPONQ8IVN8 264 aa13.07□□□□□ -0.32
SLC12A4-201ENST00000316341 LINC00337Q8N6G1 96 aa13.06□□□□□ -0.32
SLC12A4-201ENST00000316341 FAM110AQ9BQ89 295 aa13.05□□□□□ -0.32
SLC12A4-201ENST00000316341 MYO15AQ9UKN7 3530 aa13.05□□□□□ -0.32
SLC12A4-201ENST00000316341 C5orf47Q569G3 176 aa13.04□□□□□ -0.32
SLC12A4-201ENST00000316341 C9orf66Q5T8R8 295 aa13.04□□□□□ -0.32
SLC12A4-201ENST00000316341 SHISA2Q6UWI4 295 aa13.04□□□□□ -0.32
SLC12A4-201ENST00000316341 Q6JHZ5 121 aa13.04□□□□□ -0.32
SLC12A4-201ENST00000316341 LINC00846Q9NV44 126 aa13.04□□□□□ -0.32
SLC12A4-201ENST00000316341 PPDPFQ9H3Y8 114 aa13.04□□□□□ -0.32
SLC12A4-201ENST00000316341 UBE2DNLQ8IWF7 75 aa13.03□□□□□ -0.32
SLC12A4-201ENST00000316341 ATP5EP2Q5VTU8 51 aa13.03□□□□□ -0.32
SLC12A4-201ENST00000316341 MPLKIPQ8TAP9 179 aa13.03□□□□□ -0.32
SLC12A4-201ENST00000316341 BRK1Q8WUW1 75 aa13.03□□□□□ -0.32
SLC12A4-201ENST00000316341 EPG5Q9HCE0 2579 aa13.02□□□□□ -0.32
SLC12A4-201ENST00000316341 BRI3O95415 125 aa13.02□□□□□ -0.32
SLC12A4-201ENST00000316341 SVIPQ8NHG7 77 aa13.02□□□□□ -0.32
SLC12A4-201ENST00000316341 SOSTDC1Q6X4U4 206 aa13.02□□□□□ -0.33
SLC12A4-201ENST00000316341 EYSQ5T1H1 3165 aa13.02□□□□□ -0.33
SLC12A4-201ENST00000316341 PDE6GP18545 87 aa13.01□□□□□ -0.33
SLC12A4-201ENST00000316341 BEAN1Q3B7T3 259 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms