RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 LINC01620Q4KN68 170 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 Q9H8V8 135 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 GAGE7O76087 117 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
CHFR-202ENST00000315585 COX6A2Q02221 97 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 WNK1Q9H4A3 2382 aa10.6□□□□□ -0.71
CHFR-202ENST00000315585 TRBV10-2A0A0K0K1G8 114 aa10.59□□□□□ -0.71
CHFR-202ENST00000315585 A8MZ25 164 aa10.59□□□□□ -0.71
CHFR-202ENST00000315585 TRIAP1O43715 76 aa10.59□□□□□ -0.71
CHFR-202ENST00000315585 CSNK1G2-AS1Q8NCQ2 148 aa10.59□□□□□ -0.71
CHFR-202ENST00000315585 PLAC8L1A1L4L8 177 aa10.59□□□□□ -0.71
CHFR-202ENST00000315585 SMIM1B2RUZ4 78 aa10.59□□□□□ -0.71
CHFR-202ENST00000315585 PRIMA1Q86XR5 153 aa10.58□□□□□ -0.72
CHFR-202ENST00000315585 NF1P21359 2839 aa10.58□□□□□ -0.72
CHFR-202ENST00000315585 MEIG1Q5JSS6 88 aa10.57□□□□□ -0.72
CHFR-202ENST00000315585 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
CHFR-202ENST00000315585 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
CHFR-202ENST00000315585 H3BT86 120 aa10.56□□□□□ -0.72
CHFR-202ENST00000315585 RPL13AP40429 203 aaKnown RBP10.56□□□□□ -0.72
CHFR-202ENST00000315585 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
CHFR-202ENST00000315585 KIR2DL5BQ8NHK3 375 aa10.55□□□□□ -0.72
CHFR-202ENST00000315585 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
CHFR-202ENST00000315585 NPC2P61916 151 aa10.55□□□□□ -0.72
CHFR-202ENST00000315585 ZNF625Q96I27 306 aaPredicted RBP10.55□□□□□ -0.72
CHFR-202ENST00000315585 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
CHFR-202ENST00000315585 SMIM9A6NGZ8 99 aa10.54□□□□□ -0.72
CHFR-202ENST00000315585 F5H768 121 aa10.54□□□□□ -0.72
CHFR-202ENST00000315585 SETXQ7Z333 2677 aaKnown RBP10.53□□□□□ -0.72
CHFR-202ENST00000315585 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
CHFR-202ENST00000315585 FHL2Q14192 279 aa10.53□□□□□ -0.72
CHFR-202ENST00000315585 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
CHFR-202ENST00000315585 CDIP1Q9H305 208 aa10.53□□□□□ -0.72
CHFR-202ENST00000315585 CUBNO60494 3623 aa10.53□□□□□ -0.72
CHFR-202ENST00000315585 LST1O00453 97 aa10.53□□□□□ -0.72
CHFR-202ENST00000315585 DAND5Q8N907 189 aa10.52□□□□□ -0.73
CHFR-202ENST00000315585 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.73
CHFR-202ENST00000315585 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
CHFR-202ENST00000315585 NTN5Q8WTR8 489 aaPredicted RBP10.51□□□□□ -0.73
CHFR-202ENST00000315585 HIVEP1P15822 2718 aa10.51□□□□□ -0.73
CHFR-202ENST00000315585 C2CD3Q4AC94 2353 aa10.51□□□□□ -0.73
CHFR-202ENST00000315585 A0A1B0GV72 72 aa10.5□□□□□ -0.73
CHFR-202ENST00000315585 COX7B2Q8TF08 81 aa10.5□□□□□ -0.73
CHFR-202ENST00000315585 UBE2WQ96B02 151 aa10.5□□□□□ -0.73
CHFR-202ENST00000315585 SETD2Q9BYW2 2564 aaPredicted RBP10.5□□□□□ -0.73
CHFR-202ENST00000315585 GAGE6Q13070 117 aa10.49□□□□□ -0.73
CHFR-202ENST00000315585 TRAV13-2A0A0B4J235 113 aa10.49□□□□□ -0.73
CHFR-202ENST00000315585 LINC00612Q8N6U2 182 aa10.49□□□□□ -0.73
CHFR-202ENST00000315585 LOC100131303A0A0U1RQF7 123 aa10.48□□□□□ -0.73
CHFR-202ENST00000315585 COX7A2LO14548 114 aa10.48□□□□□ -0.73
CHFR-202ENST00000315585 FAM222AQ5U5X8 452 aa10.48□□□□□ -0.73
CHFR-202ENST00000315585 WIPF1O43516 503 aa10.47□□□□□ -0.73
CHFR-202ENST00000315585 DEFB130BP0DP73 79 aa10.47□□□□□ -0.73
CHFR-202ENST00000315585 DEFB130AP0DP74 79 aa10.47□□□□□ -0.73
CHFR-202ENST00000315585 APOC4P55056 127 aa10.47□□□□□ -0.73
CHFR-202ENST00000315585 SHISA2Q6UWI4 295 aa10.47□□□□□ -0.73
CHFR-202ENST00000315585 A0A087WZ39 114 aa10.46□□□□□ -0.73
CHFR-202ENST00000315585 TRAV8-4A0A0B4J246 113 aa10.46□□□□□ -0.73
CHFR-202ENST00000315585 A0A0U1RRA0 63 aa10.46□□□□□ -0.73
CHFR-202ENST00000315585 PRO0255Q9UI72 69 aa10.46□□□□□ -0.73
CHFR-202ENST00000315585 IGHV3OR16-9A0A0B4J2B5 98 aa10.46□□□□□ -0.74
CHFR-202ENST00000315585 A0A1B0GUV1 79 aa10.46□□□□□ -0.74
CHFR-202ENST00000315585 CLEC2BQ92478 149 aa10.46□□□□□ -0.74
CHFR-202ENST00000315585 LYRM9A8MSI8 78 aa10.45□□□□□ -0.74
CHFR-202ENST00000315585 IBA57-AS1B1ANH7 110 aa10.45□□□□□ -0.74
CHFR-202ENST00000315585 XGP55808 180 aa10.45□□□□□ -0.74
CHFR-202ENST00000315585 SS18Q15532 418 aa10.45□□□□□ -0.74
CHFR-202ENST00000315585 TEX49A0A1B0GTD5 131 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 TRACP01848 142 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 SPATA3Q8NHX4 192 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 TOMM7Q9P0U1 55 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 GYPEP15421 78 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 LINC01561Q8N1V8 128 aa10.44□□□□□ -0.74
CHFR-202ENST00000315585 FAM240AA0A1B0GVK7 77 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 CRPP02741 224 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 MT-ATP8P03928 68 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 KRTAP24-1Q3LI83 254 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 TRAV26-1A0A087WT03 109 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 IGKV3OR2-268A0A0C4DH90 116 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 SNCGO76070 127 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 NOTCH3Q9UM47 2321 aa10.43□□□□□ -0.74
CHFR-202ENST00000315585 LINC00959A0A1B0GUT2 108 aa10.42□□□□□ -0.74
CHFR-202ENST00000315585 LINC00158P58513 81 aa10.42□□□□□ -0.74
CHFR-202ENST00000315585 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
CHFR-202ENST00000315585 DEFB121Q5J5C9 76 aa10.42□□□□□ -0.74
CHFR-202ENST00000315585 C3orf56Q8N813 242 aa10.42□□□□□ -0.74
CHFR-202ENST00000315585 MIR7-3HGQ8N6C7 128 aa10.42□□□□□ -0.74
CHFR-202ENST00000315585 CKS1BP61024 79 aa10.41□□□□□ -0.74
CHFR-202ENST00000315585 SND1-IT1Q9HBX3 110 aa10.41□□□□□ -0.74
CHFR-202ENST00000315585 F8P00451 2351 aa10.41□□□□□ -0.74
CHFR-202ENST00000315585 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
CHFR-202ENST00000315585 X6R8D5 127 aa10.41□□□□□ -0.74
CHFR-202ENST00000315585 ACYP1P07311 99 aa10.4□□□□□ -0.74
CHFR-202ENST00000315585 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
CHFR-202ENST00000315585 PAX4O43316 350 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms