RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TIRAPP58753 221 aa8.19□□□□□ -1.1
PTPN2-201ENST00000309660 FOXI1Q12951 378 aa8.19□□□□□ -1.1
PTPN2-201ENST00000309660 TRIAP1O43715 76 aa8.18□□□□□ -1.1
PTPN2-201ENST00000309660 CSNK1G2-AS1Q8NCQ2 148 aa8.18□□□□□ -1.1
PTPN2-201ENST00000309660 TENM1Q9UKZ4 2725 aa8.18□□□□□ -1.1
PTPN2-201ENST00000309660 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
PTPN2-201ENST00000309660 SLC25A20O43772 301 aa8.18□□□□□ -1.1
PTPN2-201ENST00000309660 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
PTPN2-201ENST00000309660 KMT2BQ9UMN6 2715 aaPredicted RBP8.17□□□□□ -1.1
PTPN2-201ENST00000309660 RPL13AP40429 203 aaKnown RBP8.17□□□□□ -1.1
PTPN2-201ENST00000309660 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
PTPN2-201ENST00000309660 FLNBO75369 2602 aaKnown RBP8.17□□□□□ -1.1
PTPN2-201ENST00000309660 CLPSL2Q6UWE3 100 aa8.17□□□□□ -1.1
PTPN2-201ENST00000309660 C11orf68Q9H3H3 251 aaKnown RBP8.17□□□□□ -1.1
PTPN2-201ENST00000309660 NSD1Q96L73 2696 aaPredicted RBP8.17□□□□□ -1.1
PTPN2-201ENST00000309660 IGLV4-60A0A075B6I1 120 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 NDUFA1O15239 70 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 CLEC2BQ92478 149 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 SIGMAR1Q99720 223 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 FHL2Q14192 279 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 TEN1Q86WV5 123 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 SPANXDQ9BXN6 97 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 SPANXCQ9NY87 97 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 ICOSQ9Y6W8 199 aa8.16□□□□□ -1.1
PTPN2-201ENST00000309660 DEFB135Q30KP9 77 aa8.15□□□□□ -1.1
PTPN2-201ENST00000309660 IGLV5-45A0A087WSX0 123 aa8.15□□□□□ -1.1
PTPN2-201ENST00000309660 COX6CP09669 75 aa8.15□□□□□ -1.1
PTPN2-201ENST00000309660 GYPEP15421 78 aa8.15□□□□□ -1.1
PTPN2-201ENST00000309660 C5orf38Q86SI9 138 aa8.15□□□□□ -1.1
PTPN2-201ENST00000309660 ATXN8Q156A1 80 aa8.15□□□□□ -1.11
PTPN2-201ENST00000309660 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.11
PTPN2-201ENST00000309660 HIVEP1P15822 2718 aa8.14□□□□□ -1.11
PTPN2-201ENST00000309660 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
PTPN2-201ENST00000309660 LINC00308Q8TCZ7 52 aa8.14□□□□□ -1.11
PTPN2-201ENST00000309660 OVOL2Q9BRP0 275 aa8.14□□□□□ -1.11
PTPN2-201ENST00000309660 LINC01620Q4KN68 170 aa8.13□□□□□ -1.11
PTPN2-201ENST00000309660 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
PTPN2-201ENST00000309660 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
PTPN2-201ENST00000309660 CARD19Q96LW7 228 aa8.13□□□□□ -1.11
PTPN2-201ENST00000309660 FAM110AQ9BQ89 295 aa8.13□□□□□ -1.11
PTPN2-201ENST00000309660 CSDC2Q9Y534 153 aaKnown RBP8.13□□□□□ -1.11
PTPN2-201ENST00000309660 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
PTPN2-201ENST00000309660 HTN3P15516 51 aa8.13□□□□□ -1.11
PTPN2-201ENST00000309660 FAM222AQ5U5X8 452 aa8.12□□□□□ -1.11
PTPN2-201ENST00000309660 XCL1P47992 114 aa8.12□□□□□ -1.11
PTPN2-201ENST00000309660 TEP1Q99973 2627 aaKnown RBP8.11□□□□□ -1.11
PTPN2-201ENST00000309660 PFN2P35080 140 aa8.11□□□□□ -1.11
PTPN2-201ENST00000309660 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
PTPN2-201ENST00000309660 ATP6V0E2Q8NHE4 81 aa8.11□□□□□ -1.11
PTPN2-201ENST00000309660 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
PTPN2-201ENST00000309660 F5H768 121 aa8.11□□□□□ -1.11
PTPN2-201ENST00000309660 IFITM1P13164 125 aa8.11□□□□□ -1.11
PTPN2-201ENST00000309660 LINC00158P58513 81 aa8.11□□□□□ -1.11
PTPN2-201ENST00000309660 C2orf82Q6UX34 121 aa8.1□□□□□ -1.11
PTPN2-201ENST00000309660 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
PTPN2-201ENST00000309660 TIMM17BO60830 172 aa8.1□□□□□ -1.11
PTPN2-201ENST00000309660 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
PTPN2-201ENST00000309660 F8P00451 2351 aa8.09□□□□□ -1.11
PTPN2-201ENST00000309660 MIR7-3HGQ8N6C7 128 aa8.09□□□□□ -1.11
PTPN2-201ENST00000309660 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
PTPN2-201ENST00000309660 X6R8D5 127 aa8.09□□□□□ -1.11
PTPN2-201ENST00000309660 PAX4O43316 350 aa8.09□□□□□ -1.11
PTPN2-201ENST00000309660 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
PTPN2-201ENST00000309660 IGLV10-54A0A075B6I4 117 aa8.08□□□□□ -1.12
PTPN2-201ENST00000309660 CIDEAO60543 219 aa8.08□□□□□ -1.12
PTPN2-201ENST00000309660 PRO0255Q9UI72 69 aa8.07□□□□□ -1.12
PTPN2-201ENST00000309660 MT-ATP8P03928 68 aa8.07□□□□□ -1.12
PTPN2-201ENST00000309660 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
PTPN2-201ENST00000309660 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 HERV-K104P63124 156 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 CDIP1Q9H305 208 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 Q8N3U1 123 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 KIR2DL5BQ8NHK3 375 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 H7C423 109 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 DAD1P61803 113 aa8.06□□□□□ -1.12
PTPN2-201ENST00000309660 LINC00959A0A1B0GUT2 108 aa8.05□□□□□ -1.12
PTPN2-201ENST00000309660 XGP55808 180 aa8.05□□□□□ -1.12
PTPN2-201ENST00000309660 IGHV3OR16-9A0A0B4J2B5 98 aa8.05□□□□□ -1.12
PTPN2-201ENST00000309660 IGHV4-28A0A0C4DH34 117 aa8.05□□□□□ -1.12
PTPN2-201ENST00000309660 COPS9Q8WXC6 57 aa8.05□□□□□ -1.12
PTPN2-201ENST00000309660 UBE2WQ96B02 151 aa8.05□□□□□ -1.12
PTPN2-201ENST00000309660 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
PTPN2-201ENST00000309660 TRAV26-1A0A087WT03 109 aa8.04□□□□□ -1.12
PTPN2-201ENST00000309660 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
PTPN2-201ENST00000309660 LST1O00453 97 aa8.04□□□□□ -1.12
PTPN2-201ENST00000309660 CRPP02741 224 aa8.04□□□□□ -1.12
PTPN2-201ENST00000309660 ANGP03950 147 aaKnown RBP8.04□□□□□ -1.12
PTPN2-201ENST00000309660 LINC00269Q8N2A0 174 aa8.04□□□□□ -1.12
PTPN2-201ENST00000309660 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
PTPN2-201ENST00000309660 SS18Q15532 418 aa8.04□□□□□ -1.12
PTPN2-201ENST00000309660 CELA1Q9UNI1 258 aa8.03□□□□□ -1.12
PTPN2-201ENST00000309660 APOC4P55056 127 aa8.03□□□□□ -1.12
PTPN2-201ENST00000309660 A0A087WZ39 114 aa8.02□□□□□ -1.13
PTPN2-201ENST00000309660 SMIM9A6NGZ8 99 aa8.01□□□□□ -1.13
PTPN2-201ENST00000309660 RNF183Q96D59 192 aa8.01□□□□□ -1.13
PTPN2-201ENST00000309660 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
PTPN2-201ENST00000309660 COX7A2LO14548 114 aa8.01□□□□□ -1.13
PTPN2-201ENST00000309660 Q9HAA7 133 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms