RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 HERV-K104P63124 156 aa10.64□□□□□ -0.71
RUNX3-201ENST00000308873 DEFB114Q30KQ6 69 aa10.63□□□□□ -0.71
RUNX3-201ENST00000308873 K7EQD1 137 aa10.63□□□□□ -0.71
RUNX3-201ENST00000308873 TMEM243Q9BU79 118 aa10.63□□□□□ -0.71
RUNX3-201ENST00000308873 SND1-IT1Q9HBX3 110 aa10.63□□□□□ -0.71
RUNX3-201ENST00000308873 C11orf72Q8NBR9 251 aa10.63□□□□□ -0.71
RUNX3-201ENST00000308873 C9orf153Q5TBE3 101 aa10.62□□□□□ -0.71
RUNX3-201ENST00000308873 IGKV3D-7A0A0C4DH55 119 aa10.62□□□□□ -0.71
RUNX3-201ENST00000308873 SLPIP03973 132 aa10.62□□□□□ -0.71
RUNX3-201ENST00000308873 DNAJC30Q96LL9 226 aa10.62□□□□□ -0.71
RUNX3-201ENST00000308873 FAM218AQ96MZ4 157 aa10.62□□□□□ -0.71
RUNX3-201ENST00000308873 TIRAPP58753 221 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 C14orf132Q9NPU4 83 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 COPS9Q8WXC6 57 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 KRTAP10-9P60411 292 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 Q6YL49 198 aa10.61□□□□□ -0.71
RUNX3-201ENST00000308873 C1orf158Q8N1D5 194 aa10.6□□□□□ -0.71
RUNX3-201ENST00000308873 Q96MF0 132 aa10.6□□□□□ -0.71
RUNX3-201ENST00000308873 PRORYQ9H606 182 aa10.6□□□□□ -0.71
RUNX3-201ENST00000308873 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
RUNX3-201ENST00000308873 XCL1P47992 114 aa10.59□□□□□ -0.71
RUNX3-201ENST00000308873 DSCR9P59020 149 aa10.59□□□□□ -0.71
RUNX3-201ENST00000308873 SDIM1Q6ZPB5 146 aa10.59□□□□□ -0.71
RUNX3-201ENST00000308873 LECT2O14960 151 aa10.58□□□□□ -0.72
RUNX3-201ENST00000308873 CDC42SE2Q9NRR3 84 aa10.58□□□□□ -0.72
RUNX3-201ENST00000308873 M0QXV9 152 aa10.58□□□□□ -0.72
RUNX3-201ENST00000308873 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
RUNX3-201ENST00000308873 TIMM17BO60830 172 aa10.57□□□□□ -0.72
RUNX3-201ENST00000308873 SMCR5Q8TEV8 140 aa10.57□□□□□ -0.72
RUNX3-201ENST00000308873 ESM1Q9NQ30 184 aa10.57□□□□□ -0.72
RUNX3-201ENST00000308873 CCL24O00175 119 aa10.56□□□□□ -0.72
RUNX3-201ENST00000308873 IGHV4-31P0DP07 118 aa10.56□□□□□ -0.72
RUNX3-201ENST00000308873 HIST1H4AP62805 103 aaKnown RBP10.56□□□□□ -0.72
RUNX3-201ENST00000308873 HIST2H2BCQ6DN03 193 aa10.56□□□□□ -0.72
RUNX3-201ENST00000308873 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
RUNX3-201ENST00000308873 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
RUNX3-201ENST00000308873 ITPR3Q14573 2671 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
RUNX3-201ENST00000308873 LINC00337Q8N6G1 96 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 A0A087WYN8 130 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 MALP21145 153 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 Q6Q795 121 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 TRAV13-2A0A0B4J235 113 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 J3QLI3 93 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 NCR3O14931 201 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 C4orf3Q8WVX3 66 aa10.55□□□□□ -0.72
RUNX3-201ENST00000308873 IGLV10-54A0A075B6I4 117 aa10.54□□□□□ -0.72
RUNX3-201ENST00000308873 IGLV5-39A0A0G2JS06 123 aa10.54□□□□□ -0.72
RUNX3-201ENST00000308873 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
RUNX3-201ENST00000308873 BEAN1Q3B7T3 259 aa10.53□□□□□ -0.72
RUNX3-201ENST00000308873 INAFM2P0DMQ5 153 aa10.53□□□□□ -0.72
RUNX3-201ENST00000308873 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
RUNX3-201ENST00000308873 LINC00643Q86TS7 51 aa10.53□□□□□ -0.72
RUNX3-201ENST00000308873 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.73
RUNX3-201ENST00000308873 A0A087WVE0 104 aa10.52□□□□□ -0.73
RUNX3-201ENST00000308873 ACYP1P07311 99 aa10.51□□□□□ -0.73
RUNX3-201ENST00000308873 IGLV5-45A0A087WSX0 123 aa10.51□□□□□ -0.73
RUNX3-201ENST00000308873 FAM240AA0A1B0GVK7 77 aa10.51□□□□□ -0.73
RUNX3-201ENST00000308873 RNF152Q8N8N0 203 aa10.51□□□□□ -0.73
RUNX3-201ENST00000308873 CCL18P55774 89 aa10.51□□□□□ -0.73
RUNX3-201ENST00000308873 DEFB4AO15263 64 aa10.5□□□□□ -0.73
RUNX3-201ENST00000308873 TRACP01848 142 aa10.5□□□□□ -0.73
RUNX3-201ENST00000308873 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
RUNX3-201ENST00000308873 TRBV10-1A0A0K0K1A3 114 aa10.5□□□□□ -0.73
RUNX3-201ENST00000308873 F5H768 121 aa10.49□□□□□ -0.73
RUNX3-201ENST00000308873 HTN3P15516 51 aa10.47□□□□□ -0.73
RUNX3-201ENST00000308873 A0A1B0GX51 115 aa10.47□□□□□ -0.73
RUNX3-201ENST00000308873 WFDC9Q8NEX5 89 aa10.47□□□□□ -0.73
RUNX3-201ENST00000308873 IGKV2-28A0A075B6P5 120 aa10.46□□□□□ -0.73
RUNX3-201ENST00000308873 hADV29S1A0JD25 119 aa10.46□□□□□ -0.73
RUNX3-201ENST00000308873 IGKV2D-28P01615 120 aa10.46□□□□□ -0.73
RUNX3-201ENST00000308873 TRBV7-7A0A0K0K1E9 115 aa10.46□□□□□ -0.73
RUNX3-201ENST00000308873 GYPEP15421 78 aa10.46□□□□□ -0.73
RUNX3-201ENST00000308873 LOC107984640A0A0U1RRK4 108 aa10.46□□□□□ -0.74
RUNX3-201ENST00000308873 TMEM86BQ8N661 226 aa10.46□□□□□ -0.74
RUNX3-201ENST00000308873 DNAJC9-AS1A6NH13 148 aa10.45□□□□□ -0.74
RUNX3-201ENST00000308873 SVIPQ8NHG7 77 aa10.45□□□□□ -0.74
RUNX3-201ENST00000308873 WFDC11Q8NEX6 87 aa10.45□□□□□ -0.74
RUNX3-201ENST00000308873 LINC00526Q96FQ7 95 aa10.45□□□□□ -0.74
RUNX3-201ENST00000308873 TRBV6-8A0A0A6YYG3 113 aa10.44□□□□□ -0.74
RUNX3-201ENST00000308873 APCP25054 2843 aa10.44□□□□□ -0.74
RUNX3-201ENST00000308873 DEFB113Q30KQ7 82 aa10.44□□□□□ -0.74
RUNX3-201ENST00000308873 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
RUNX3-201ENST00000308873 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
RUNX3-201ENST00000308873 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
RUNX3-201ENST00000308873 LINC00846Q9NV44 126 aa10.43□□□□□ -0.74
RUNX3-201ENST00000308873 USP24Q9UPU5 2620 aa10.43□□□□□ -0.74
RUNX3-201ENST00000308873 RPL28P46779 137 aaKnown RBP10.43□□□□□ -0.74
RUNX3-201ENST00000308873 C9orf116Q5BN46 136 aaPredicted RBP10.42□□□□□ -0.74
RUNX3-201ENST00000308873 DEFB121Q5J5C9 76 aa10.42□□□□□ -0.74
RUNX3-201ENST00000308873 CFAP161Q6P656 301 aa10.42□□□□□ -0.74
RUNX3-201ENST00000308873 CXCL5P42830 114 aa10.42□□□□□ -0.74
RUNX3-201ENST00000308873 SS18Q15532 418 aa10.42□□□□□ -0.74
RUNX3-201ENST00000308873 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
RUNX3-201ENST00000308873 LRRC75A-AS1Q8N1F1 130 aa10.41□□□□□ -0.74
RUNX3-201ENST00000308873 A0A096LNT2 108 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms