RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 ZNF702PQ9H963 129 aa13.39□□□□□ -0.27
ATP2A2-201ENST00000308664 ZNF580Q9UK33 172 aa13.38□□□□□ -0.27
ATP2A2-201ENST00000308664 COL5A1P20908 1838 aaPredicted RBP13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 NDUFA7O95182 113 aa13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 PRO0255Q9UI72 69 aa13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 TIRAPP58753 221 aa13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 RMI2Q96E14 147 aa13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 PSMG3-AS1Q96PY0 264 aa13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 UBE2BP63146 152 aa13.37□□□□□ -0.27
ATP2A2-201ENST00000308664 EDN2P20800 178 aa13.36□□□□□ -0.27
ATP2A2-201ENST00000308664 SETXQ7Z333 2677 aaKnown RBP13.36□□□□□ -0.27
ATP2A2-201ENST00000308664 NREPQ16612 68 aa13.36□□□□□ -0.27
ATP2A2-201ENST00000308664 COX8CQ7Z4L0 72 aa13.36□□□□□ -0.27
ATP2A2-201ENST00000308664 MRGPRG-AS1Q2M3A8 158 aa13.36□□□□□ -0.27
ATP2A2-201ENST00000308664 TEP1Q99973 2627 aaKnown RBP13.35□□□□□ -0.27
ATP2A2-201ENST00000308664 UPK3BQ9BT76 320 aa13.35□□□□□ -0.27
ATP2A2-201ENST00000308664 SPAG11BQ08648 103 aa13.35□□□□□ -0.27
ATP2A2-201ENST00000308664 RPL18AQ02543 176 aaKnown RBP13.35□□□□□ -0.27
ATP2A2-201ENST00000308664 ENHOQ6UWT2 76 aa13.34□□□□□ -0.27
ATP2A2-201ENST00000308664 CDIP1Q9H305 208 aa13.34□□□□□ -0.27
ATP2A2-201ENST00000308664 IMUPQ9GZP8 106 aa13.34□□□□□ -0.27
ATP2A2-201ENST00000308664 AKAP13Q12802 2813 aa13.34□□□□□ -0.27
ATP2A2-201ENST00000308664 C9orf85Q96MD7 179 aa13.34□□□□□ -0.27
ATP2A2-201ENST00000308664 RAI1Q7Z5J4 1906 aaPredicted RBP13.34□□□□□ -0.27
ATP2A2-201ENST00000308664 UBE2D4Q9Y2X8 147 aa13.33□□□□□ -0.28
ATP2A2-201ENST00000308664 MRPS36P82909 103 aaKnown RBP13.32□□□□□ -0.28
ATP2A2-201ENST00000308664 USP17L23D6RBM5 183 aa13.32□□□□□ -0.28
ATP2A2-201ENST00000308664 TIMM17BO60830 172 aa13.31□□□□□ -0.28
ATP2A2-201ENST00000308664 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.28
ATP2A2-201ENST00000308664 DCANP1Q8TF63 244 aa13.31□□□□□ -0.28
ATP2A2-201ENST00000308664 SCXQ7RTU7 201 aa13.3□□□□□ -0.28
ATP2A2-201ENST00000308664 Q6Q795 121 aa13.3□□□□□ -0.28
ATP2A2-201ENST00000308664 OXLD1Q5BKU9 147 aa13.3□□□□□ -0.28
ATP2A2-201ENST00000308664 ADAMTSL4-AS1Q5T5F5 129 aa13.3□□□□□ -0.28
ATP2A2-201ENST00000308664 COX7CP15954 63 aa13.29□□□□□ -0.28
ATP2A2-201ENST00000308664 C11orf45Q8TAV5 145 aa13.29□□□□□ -0.28
ATP2A2-201ENST00000308664 DIRC1Q969H9 104 aa13.29□□□□□ -0.28
ATP2A2-201ENST00000308664 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.29□□□□□ -0.28
ATP2A2-201ENST00000308664 FLNAP21333 2647 aaKnown RBP13.28□□□□□ -0.28
ATP2A2-201ENST00000308664 SZT2Q5T011 3432 aa13.28□□□□□ -0.28
ATP2A2-201ENST00000308664 IBA57-AS1B1ANH7 110 aa13.28□□□□□ -0.28
ATP2A2-201ENST00000308664 LINC00694P0DN24 101 aa13.28□□□□□ -0.28
ATP2A2-201ENST00000308664 CXCL5P42830 114 aa13.28□□□□□ -0.28
ATP2A2-201ENST00000308664 SERP2Q8N6R1 65 aa13.28□□□□□ -0.28
ATP2A2-201ENST00000308664 LINC00269Q8N2A0 174 aa13.27□□□□□ -0.28
ATP2A2-201ENST00000308664 HILS1P60008 231 aa13.27□□□□□ -0.28
ATP2A2-201ENST00000308664 CDK2AP2O75956 126 aa13.27□□□□□ -0.29
ATP2A2-201ENST00000308664 C6orf99Q4VX62 202 aa13.27□□□□□ -0.29
ATP2A2-201ENST00000308664 BRK1Q8WUW1 75 aa13.27□□□□□ -0.29
ATP2A2-201ENST00000308664 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
ATP2A2-201ENST00000308664 SMCPP49901 116 aaPredicted RBP13.26□□□□□ -0.29
ATP2A2-201ENST00000308664 HIGD2BQ4VC39 106 aa13.26□□□□□ -0.29
ATP2A2-201ENST00000308664 C5orf47Q569G3 176 aa13.26□□□□□ -0.29
ATP2A2-201ENST00000308664 SMIM11BQ8TCY0 68 aa13.26□□□□□ -0.29
ATP2A2-201ENST00000308664 IGLV1-40P01703 118 aa13.25□□□□□ -0.29
ATP2A2-201ENST00000308664 VPS13AQ96RL7 3174 aa13.25□□□□□ -0.29
ATP2A2-201ENST00000308664 FAM236DA0A1B0GTK5 79 aa13.25□□□□□ -0.29
ATP2A2-201ENST00000308664 ETDCA0A1B0GVM5 59 aa13.25□□□□□ -0.29
ATP2A2-201ENST00000308664 FAM236CP0DP71 79 aa13.25□□□□□ -0.29
ATP2A2-201ENST00000308664 FAM240AA0A1B0GVK7 77 aa13.25□□□□□ -0.29
ATP2A2-201ENST00000308664 DSPP15924 2871 aaKnown RBP13.25□□□□□ -0.29
ATP2A2-201ENST00000308664 TRANK1O15050 2925 aa13.23□□□□□ -0.29
ATP2A2-201ENST00000308664 LINC00242Q5T6M2 205 aa13.23□□□□□ -0.29
ATP2A2-201ENST00000308664 WFDC9Q8NEX5 89 aa13.23□□□□□ -0.29
ATP2A2-201ENST00000308664 A0A087WVE0 104 aa13.22□□□□□ -0.29
ATP2A2-201ENST00000308664 DEFB131BA0A096LNP1 70 aa13.22□□□□□ -0.29
ATP2A2-201ENST00000308664 M0QXV9 152 aa13.22□□□□□ -0.29
ATP2A2-201ENST00000308664 PRO0461Q9UI25 63 aa13.22□□□□□ -0.29
ATP2A2-201ENST00000308664 ZNF292O60281 2723 aa13.22□□□□□ -0.29
ATP2A2-201ENST00000308664 TRBV6-8A0A0A6YYG3 113 aa13.21□□□□□ -0.29
ATP2A2-201ENST00000308664 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.29
ATP2A2-201ENST00000308664 IGKV2-24A0A0C4DH68 120 aa13.21□□□□□ -0.29
ATP2A2-201ENST00000308664 PDE6GP18545 87 aa13.21□□□□□ -0.29
ATP2A2-201ENST00000308664 XAGE1AQ9HD64 81 aa13.21□□□□□ -0.29
ATP2A2-201ENST00000308664 MPLKIPQ8TAP9 179 aa13.2□□□□□ -0.3
ATP2A2-201ENST00000308664 COX7BP24311 80 aa13.2□□□□□ -0.3
ATP2A2-201ENST00000308664 SHISA2Q6UWI4 295 aa13.2□□□□□ -0.3
ATP2A2-201ENST00000308664 KLK5Q9Y337 293 aaPredicted RBP13.2□□□□□ -0.3
ATP2A2-201ENST00000308664 CHCHD10Q8WYQ3 142 aaPredicted RBP13.19□□□□□ -0.3
ATP2A2-201ENST00000308664 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
ATP2A2-201ENST00000308664 REG3AQ06141 175 aa13.19□□□□□ -0.3
ATP2A2-201ENST00000308664 SNURFQ9Y675 71 aa13.18□□□□□ -0.3
ATP2A2-201ENST00000308664 ATP5EP2Q5VTU8 51 aa13.18□□□□□ -0.3
ATP2A2-201ENST00000308664 LINC00526Q96FQ7 95 aa13.18□□□□□ -0.3
ATP2A2-201ENST00000308664 NDUFC2O95298 119 aa13.17□□□□□ -0.3
ATP2A2-201ENST00000308664 BPY2O14599 106 aa13.17□□□□□ -0.3
ATP2A2-201ENST00000308664 COX6A2Q02221 97 aa13.17□□□□□ -0.3
ATP2A2-201ENST00000308664 SMIM1B2RUZ4 78 aa13.17□□□□□ -0.3
ATP2A2-201ENST00000308664 PKIGQ9Y2B9 76 aa13.16□□□□□ -0.3
ATP2A2-201ENST00000308664 VCANP13611 3396 aa13.16□□□□□ -0.3
ATP2A2-201ENST00000308664 CDC42SE2Q9NRR3 84 aa13.16□□□□□ -0.3
ATP2A2-201ENST00000308664 ODF3L2Q3SX64 289 aa13.15□□□□□ -0.3
ATP2A2-201ENST00000308664 Q6ZQY7 126 aa13.15□□□□□ -0.3
ATP2A2-201ENST00000308664 H3BQ85 93 aa13.15□□□□□ -0.3
ATP2A2-201ENST00000308664 AMELXQ99217 191 aa13.15□□□□□ -0.3
ATP2A2-201ENST00000308664 A0A0U1RQV1 116 aa13.14□□□□□ -0.31
ATP2A2-201ENST00000308664 TRBV6-4A0A1B0GX49 114 aa13.14□□□□□ -0.31
ATP2A2-201ENST00000308664 DNAH14Q0VDD8 3507 aa13.14□□□□□ -0.31
ATP2A2-201ENST00000308664 CHCHD7Q9BUK0 85 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms