RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 AMELXQ99217 191 aa9.65□□□□□ -0.86
DDX54-201ENST00000306014 WFDC10AQ9H1F0 79 aa9.65□□□□□ -0.86
DDX54-201ENST00000306014 PRO0255Q9UI72 69 aa9.65□□□□□ -0.86
DDX54-201ENST00000306014 Q6ZSN1 163 aa9.64□□□□□ -0.87
DDX54-201ENST00000306014 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
DDX54-201ENST00000306014 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
DDX54-201ENST00000306014 COX6A2Q02221 97 aa9.64□□□□□ -0.87
DDX54-201ENST00000306014 COL27A1Q8IZC6 1860 aaPredicted RBP9.64□□□□□ -0.87
DDX54-201ENST00000306014 SPAG11BQ08648 103 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 BRI3O95415 125 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 CITED1Q99966 193 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 KLK12Q9UKR0 248 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 DSPP15924 2871 aaKnown RBP9.63□□□□□ -0.87
DDX54-201ENST00000306014 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
DDX54-201ENST00000306014 TMEM256-PLSCR3K7ERE1 68 aa9.62□□□□□ -0.87
DDX54-201ENST00000306014 HECTD1Q9ULT8 2610 aa9.62□□□□□ -0.87
DDX54-201ENST00000306014 UQCRQO14949 82 aa9.62□□□□□ -0.87
DDX54-201ENST00000306014 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
DDX54-201ENST00000306014 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
DDX54-201ENST00000306014 CAMK2N2Q96S95 79 aa9.62□□□□□ -0.87
DDX54-201ENST00000306014 SMIM1B2RUZ4 78 aa9.61□□□□□ -0.87
DDX54-201ENST00000306014 RBM3P98179 157 aaKnown RBP9.61□□□□□ -0.87
DDX54-201ENST00000306014 ODF3L2Q3SX64 289 aa9.61□□□□□ -0.87
DDX54-201ENST00000306014 TRAV23DV6A0A075B6W5 121 aa9.61□□□□□ -0.87
DDX54-201ENST00000306014 CXCL5P42830 114 aa9.61□□□□□ -0.87
DDX54-201ENST00000306014 DEFB105AQ8NG35 78 aa9.61□□□□□ -0.87
DDX54-201ENST00000306014 J3KT08 172 aa9.6□□□□□ -0.87
DDX54-201ENST00000306014 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
DDX54-201ENST00000306014 FAM19A4Q96LR4 140 aa9.6□□□□□ -0.87
DDX54-201ENST00000306014 RPL18AQ02543 176 aaKnown RBP9.6□□□□□ -0.87
DDX54-201ENST00000306014 SMIM11BQ8TCY0 68 aa9.6□□□□□ -0.87
DDX54-201ENST00000306014 CENPEQ02224 2701 aa9.6□□□□□ -0.87
DDX54-201ENST00000306014 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
DDX54-201ENST00000306014 FAM222AQ5U5X8 452 aa9.59□□□□□ -0.87
DDX54-201ENST00000306014 C3orf22Q8N5N4 141 aa9.58□□□□□ -0.88
DDX54-201ENST00000306014 F8WEM9 126 aa9.58□□□□□ -0.88
DDX54-201ENST00000306014 C9orf66Q5T8R8 295 aa9.58□□□□□ -0.88
DDX54-201ENST00000306014 CHCHD10Q8WYQ3 142 aaPredicted RBP9.58□□□□□ -0.88
DDX54-201ENST00000306014 REG3AQ06141 175 aa9.58□□□□□ -0.88
DDX54-201ENST00000306014 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
DDX54-201ENST00000306014 Q6Q795 121 aa9.57□□□□□ -0.88
DDX54-201ENST00000306014 IMUPQ9GZP8 106 aa9.57□□□□□ -0.88
DDX54-201ENST00000306014 FAM240AA0A1B0GVK7 77 aa9.57□□□□□ -0.88
DDX54-201ENST00000306014 CCL18P55774 89 aa9.57□□□□□ -0.88
DDX54-201ENST00000306014 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
DDX54-201ENST00000306014 INAFM1C9JVW0 142 aa9.57□□□□□ -0.88
DDX54-201ENST00000306014 Q9UF83 564 aa9.56□□□□□ -0.88
DDX54-201ENST00000306014 FRYLO94915 3013 aa9.56□□□□□ -0.88
DDX54-201ENST00000306014 C6orf99Q4VX62 202 aa9.56□□□□□ -0.88
DDX54-201ENST00000306014 C1orf158Q8N1D5 194 aa9.56□□□□□ -0.88
DDX54-201ENST00000306014 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
DDX54-201ENST00000306014 DIRC1Q969H9 104 aa9.55□□□□□ -0.88
DDX54-201ENST00000306014 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
DDX54-201ENST00000306014 LINC00482Q8N8I6 264 aa9.54□□□□□ -0.88
DDX54-201ENST00000306014 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
DDX54-201ENST00000306014 LINC00526Q96FQ7 95 aa9.54□□□□□ -0.88
DDX54-201ENST00000306014 C20orf197Q8N268 126 aa9.53□□□□□ -0.88
DDX54-201ENST00000306014 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
DDX54-201ENST00000306014 IGHV4-28A0A0C4DH34 117 aa9.53□□□□□ -0.88
DDX54-201ENST00000306014 LY6G6DO95868 133 aa9.53□□□□□ -0.88
DDX54-201ENST00000306014 MUC4Q99102 2169 aa9.53□□□□□ -0.88
DDX54-201ENST00000306014 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
DDX54-201ENST00000306014 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.88
DDX54-201ENST00000306014 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
DDX54-201ENST00000306014 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
DDX54-201ENST00000306014 HIGD2BQ4VC39 106 aa9.52□□□□□ -0.89
DDX54-201ENST00000306014 PSCAO43653 123 aa9.52□□□□□ -0.89
DDX54-201ENST00000306014 FRYQ5TBA9 3013 aa9.52□□□□□ -0.89
DDX54-201ENST00000306014 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
DDX54-201ENST00000306014 M0QXV9 152 aa9.51□□□□□ -0.89
DDX54-201ENST00000306014 AKAP13Q12802 2813 aa9.5□□□□□ -0.89
DDX54-201ENST00000306014 FREM2Q5SZK8 3169 aa9.5□□□□□ -0.89
DDX54-201ENST00000306014 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
DDX54-201ENST00000306014 NREPQ16612 68 aa9.5□□□□□ -0.89
DDX54-201ENST00000306014 A0A087WYN8 130 aa9.49□□□□□ -0.89
DDX54-201ENST00000306014 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
DDX54-201ENST00000306014 COX7CP15954 63 aa9.49□□□□□ -0.89
DDX54-201ENST00000306014 COX7BP24311 80 aa9.49□□□□□ -0.89
DDX54-201ENST00000306014 KLK9Q2XQG4 91 aa9.49□□□□□ -0.89
DDX54-201ENST00000306014 UBE2DNLQ8IWF7 75 aa9.49□□□□□ -0.89
DDX54-201ENST00000306014 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
DDX54-201ENST00000306014 Q8N2B8 174 aa9.48□□□□□ -0.89
DDX54-201ENST00000306014 C11orf72Q8NBR9 251 aa9.48□□□□□ -0.89
DDX54-201ENST00000306014 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDX54-201ENST00000306014 PRR3P79522 188 aaKnown RBP9.48□□□□□ -0.89
DDX54-201ENST00000306014 SMIM9A6NGZ8 99 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 CD164L2Q6UWJ8 174 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 SBSPONQ8IVN8 264 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 WFDC9Q8NEX5 89 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 HELZ2Q9BYK8 2649 aaKnown RBP9.47□□□□□ -0.89
DDX54-201ENST00000306014 A0A087WVE0 104 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 ETDCA0A1B0GVM5 59 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 LYRM9A8MSI8 78 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 SERP2Q8N6R1 65 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 SMR3AQ99954 134 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 F8P00451 2351 aa9.47□□□□□ -0.89
DDX54-201ENST00000306014 PDE6GP18545 87 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms