RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
SHCBP1-201ENST00000303383 B5MCH6 92 aa10.13□□□□□ -0.79
SHCBP1-201ENST00000303383 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
SHCBP1-201ENST00000303383 IGHV3-30-3P0DP02 117 aa10.13□□□□□ -0.79
SHCBP1-201ENST00000303383 TSPEAR-AS2P59090 65 aa10.13□□□□□ -0.79
SHCBP1-201ENST00000303383 MRAPQ8TCY5 172 aa10.13□□□□□ -0.79
SHCBP1-201ENST00000303383 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
SHCBP1-201ENST00000303383 TAL2Q16559 108 aa10.12□□□□□ -0.79
SHCBP1-201ENST00000303383 C12orf74Q32Q52 190 aa10.12□□□□□ -0.79
SHCBP1-201ENST00000303383 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
SHCBP1-201ENST00000303383 SH2D6Q7Z4S9 175 aa10.12□□□□□ -0.79
SHCBP1-201ENST00000303383 CEND1Q8N111 149 aa10.12□□□□□ -0.79
SHCBP1-201ENST00000303383 TAX1BP3O14907 124 aa10.11□□□□□ -0.79
SHCBP1-201ENST00000303383 PPDPFQ9H3Y8 114 aa10.11□□□□□ -0.79
SHCBP1-201ENST00000303383 IGLV4-60A0A075B6I1 120 aa10.11□□□□□ -0.79
SHCBP1-201ENST00000303383 A0A0J9YWU9 116 aa10.1□□□□□ -0.79
SHCBP1-201ENST00000303383 MDFIQ99750 246 aa10.1□□□□□ -0.79
SHCBP1-201ENST00000303383 MGAM2Q2M2H8 2515 aa10.1□□□□□ -0.79
SHCBP1-201ENST00000303383 COX6A2Q02221 97 aa10.1□□□□□ -0.79
SHCBP1-201ENST00000303383 SPATA25Q9BR10 227 aa10.1□□□□□ -0.79
SHCBP1-201ENST00000303383 C11orf68Q9H3H3 251 aaKnown RBP10.1□□□□□ -0.79
SHCBP1-201ENST00000303383 GAGE12HA6NDE8 117 aa10.09□□□□□ -0.79
SHCBP1-201ENST00000303383 FXYD2P54710 66 aa10.09□□□□□ -0.79
SHCBP1-201ENST00000303383 GTF2H5Q6ZYL4 71 aa10.09□□□□□ -0.79
SHCBP1-201ENST00000303383 RAB37Q96AX2 223 aa10.09□□□□□ -0.79
SHCBP1-201ENST00000303383 NHP2Q9NX24 153 aaKnown RBP10.09□□□□□ -0.79
SHCBP1-201ENST00000303383 NDUFA12Q9UI09 145 aa10.09□□□□□ -0.79
SHCBP1-201ENST00000303383 F8WDY8 70 aa10.08□□□□□ -0.8
SHCBP1-201ENST00000303383 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
SHCBP1-201ENST00000303383 Q6ZTC4 211 aa10.08□□□□□ -0.8
SHCBP1-201ENST00000303383 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
SHCBP1-201ENST00000303383 TM2D2Q9BX73 214 aa10.07□□□□□ -0.8
SHCBP1-201ENST00000303383 IGLV5-45A0A087WSX0 123 aa10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 SS18Q15532 418 aa10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 K7EIL1 84 aa10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 A0A1B0GUV1 79 aa10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 ANGP03950 147 aaKnown RBP10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 NAA38Q9BRA0 125 aaKnown RBP10.06□□□□□ -0.8
SHCBP1-201ENST00000303383 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
SHCBP1-201ENST00000303383 GAGE10A6NGK3 116 aa10.05□□□□□ -0.8
SHCBP1-201ENST00000303383 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
SHCBP1-201ENST00000303383 KPRPQ5T749 579 aaPredicted RBP10.05□□□□□ -0.8
SHCBP1-201ENST00000303383 LELP1Q5T871 98 aa10.05□□□□□ -0.8
SHCBP1-201ENST00000303383 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
SHCBP1-201ENST00000303383 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
SHCBP1-201ENST00000303383 TOMM7Q9P0U1 55 aa10.04□□□□□ -0.8
SHCBP1-201ENST00000303383 A0A0J9YXY3 114 aa10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 PRSS2P07478 247 aa10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 ZFAND6Q6FIF0 208 aa10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 XCL1P47992 114 aa10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
SHCBP1-201ENST00000303383 K7ERJ3 54 aa10.02□□□□□ -0.8
SHCBP1-201ENST00000303383 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.8
SHCBP1-201ENST00000303383 H3BUT2 72 aa10.02□□□□□ -0.81
SHCBP1-201ENST00000303383 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
SHCBP1-201ENST00000303383 RPL24P83731 157 aaKnown RBP10.02□□□□□ -0.81
SHCBP1-201ENST00000303383 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
SHCBP1-201ENST00000303383 Q9H8V8 135 aa10.02□□□□□ -0.81
SHCBP1-201ENST00000303383 H3BNG1 76 aa10.01□□□□□ -0.81
SHCBP1-201ENST00000303383 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
SHCBP1-201ENST00000303383 IGLV5-39A0A0G2JS06 123 aa10□□□□□ -0.81
SHCBP1-201ENST00000303383 C9orf118A6NHY6 69 aa10□□□□□ -0.81
SHCBP1-201ENST00000303383 APOMO95445 188 aa10□□□□□ -0.81
SHCBP1-201ENST00000303383 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
SHCBP1-201ENST00000303383 LYPD5Q6UWN5 251 aa10□□□□□ -0.81
SHCBP1-201ENST00000303383 TM2D3Q9BRN9 247 aa10□□□□□ -0.81
SHCBP1-201ENST00000303383 NDUFA1O15239 70 aa9.99□□□□□ -0.81
SHCBP1-201ENST00000303383 REG3AQ06141 175 aa9.99□□□□□ -0.81
SHCBP1-201ENST00000303383 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
SHCBP1-201ENST00000303383 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
SHCBP1-201ENST00000303383 IGLV10-54A0A075B6I4 117 aa9.98□□□□□ -0.81
SHCBP1-201ENST00000303383 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
SHCBP1-201ENST00000303383 ANAPC13Q9BS18 74 aa9.98□□□□□ -0.81
SHCBP1-201ENST00000303383 TENM3Q9P273 2699 aa9.98□□□□□ -0.81
SHCBP1-201ENST00000303383 IGHV3OR16-9A0A0B4J2B5 98 aa9.98□□□□□ -0.81
SHCBP1-201ENST00000303383 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
SHCBP1-201ENST00000303383 Q8N3U1 123 aa9.98□□□□□ -0.81
SHCBP1-201ENST00000303383 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 CMYA5Q8N3K9 4069 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 IGHV3-33P01772 117 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 CRPP02741 224 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 A0A087WZ39 114 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 TRAV10A0A0B4J240 114 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 NPC2P61916 151 aa9.97□□□□□ -0.81
SHCBP1-201ENST00000303383 FABP2P12104 132 aa9.96□□□□□ -0.81
SHCBP1-201ENST00000303383 MALP21145 153 aa9.96□□□□□ -0.81
SHCBP1-201ENST00000303383 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
SHCBP1-201ENST00000303383 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
SHCBP1-201ENST00000303383 COX7A2LO14548 114 aa9.94□□□□□ -0.82
SHCBP1-201ENST00000303383 MIAQ16674 131 aa9.94□□□□□ -0.82
SHCBP1-201ENST00000303383 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
SHCBP1-201ENST00000303383 DAND5Q8N907 189 aa9.94□□□□□ -0.82
SHCBP1-201ENST00000303383 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.93□□□□□ -0.82
SHCBP1-201ENST00000303383 TIMM17BO60830 172 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms