RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 A0A1B0GUV1 79 aa9.39□□□□□ -0.91
CHMP4C-201ENST00000297265 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
CHMP4C-201ENST00000297265 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHMP4C-201ENST00000297265 UBE2V1Q13404 147 aa9.39□□□□□ -0.91
CHMP4C-201ENST00000297265 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
CHMP4C-201ENST00000297265 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
CHMP4C-201ENST00000297265 H3BUT2 72 aa9.38□□□□□ -0.91
CHMP4C-201ENST00000297265 RBX1P62877 108 aa9.37□□□□□ -0.91
CHMP4C-201ENST00000297265 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
CHMP4C-201ENST00000297265 HTN3P15516 51 aa9.36□□□□□ -0.91
CHMP4C-201ENST00000297265 VAMP3Q15836 100 aa9.36□□□□□ -0.91
CHMP4C-201ENST00000297265 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
CHMP4C-201ENST00000297265 Q8N3U1 123 aa9.36□□□□□ -0.91
CHMP4C-201ENST00000297265 PRB2P02812 416 aaPredicted RBP9.35□□□□□ -0.91
CHMP4C-201ENST00000297265 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
CHMP4C-201ENST00000297265 IGKV3OR2-268A0A0C4DH90 116 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 LINC00959A0A1B0GUT2 108 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 TEX48A0A1B0GUV7 120 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 IGLL5B9A064 214 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 TMEM262E9PQX1 116 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 NDUFA1O15239 70 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 A0A1W2PPM0 123 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 MDFIQ99750 246 aa9.34□□□□□ -0.91
CHMP4C-201ENST00000297265 CFC1BP0CG36 223 aa9.33□□□□□ -0.92
CHMP4C-201ENST00000297265 CFC1P0CG37 223 aa9.33□□□□□ -0.92
CHMP4C-201ENST00000297265 Q6ZTC4 211 aa9.33□□□□□ -0.92
CHMP4C-201ENST00000297265 MUSTN1Q8IVN3 82 aa9.33□□□□□ -0.92
CHMP4C-201ENST00000297265 TMEM238C9JI98 176 aa9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 A0A0J9YWU9 116 aa9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 K7EIL1 84 aa9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 Q9H8V8 135 aa9.32□□□□□ -0.92
CHMP4C-201ENST00000297265 A0A087WZ39 114 aa9.31□□□□□ -0.92
CHMP4C-201ENST00000297265 TMEM238LA0A1B0GVL6 79 aa9.31□□□□□ -0.92
CHMP4C-201ENST00000297265 A4D1N5 150 aa9.31□□□□□ -0.92
CHMP4C-201ENST00000297265 A6NJY4 79 aa9.31□□□□□ -0.92
CHMP4C-201ENST00000297265 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
CHMP4C-201ENST00000297265 SPANXCQ9NY87 97 aa9.31□□□□□ -0.92
CHMP4C-201ENST00000297265 LELP1Q5T871 98 aa9.3□□□□□ -0.92
CHMP4C-201ENST00000297265 DNHD1Q96M86 4753 aa9.3□□□□□ -0.92
CHMP4C-201ENST00000297265 H3BNG1 76 aa9.3□□□□□ -0.92
CHMP4C-201ENST00000297265 TIMM17BO60830 172 aa9.3□□□□□ -0.92
CHMP4C-201ENST00000297265 KPRPQ5T749 579 aaPredicted RBP9.3□□□□□ -0.92
CHMP4C-201ENST00000297265 LYPD5Q6UWN5 251 aa9.3□□□□□ -0.92
CHMP4C-201ENST00000297265 GAGE10A6NGK3 116 aa9.29□□□□□ -0.92
CHMP4C-201ENST00000297265 K7EP34 96 aa9.29□□□□□ -0.92
CHMP4C-201ENST00000297265 APOMO95445 188 aa9.29□□□□□ -0.92
CHMP4C-201ENST00000297265 CLPSL2Q6UWE3 100 aa9.29□□□□□ -0.92
CHMP4C-201ENST00000297265 SH2D6Q7Z4S9 175 aa9.29□□□□□ -0.92
CHMP4C-201ENST00000297265 LINC00269Q8N2A0 174 aa9.29□□□□□ -0.92
CHMP4C-201ENST00000297265 MIAQ16674 131 aa9.28□□□□□ -0.92
CHMP4C-201ENST00000297265 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
CHMP4C-201ENST00000297265 TM2D3Q9BRN9 247 aa9.28□□□□□ -0.92
CHMP4C-201ENST00000297265 NANOS2P60321 138 aaKnown RBP9.28□□□□□ -0.92
CHMP4C-201ENST00000297265 DAND5Q8N907 189 aa9.28□□□□□ -0.92
CHMP4C-201ENST00000297265 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
CHMP4C-201ENST00000297265 TSPAN13O95857 204 aa9.27□□□□□ -0.93
CHMP4C-201ENST00000297265 FABP2P12104 132 aa9.27□□□□□ -0.93
CHMP4C-201ENST00000297265 XCL1P47992 114 aa9.27□□□□□ -0.93
CHMP4C-201ENST00000297265 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
CHMP4C-201ENST00000297265 SPCS1Q9Y6A9 102 aa9.27□□□□□ -0.93
CHMP4C-201ENST00000297265 PRSS2P07478 247 aa9.26□□□□□ -0.93
CHMP4C-201ENST00000297265 COX7B2Q8TF08 81 aa9.26□□□□□ -0.93
CHMP4C-201ENST00000297265 ANGP03950 147 aaKnown RBP9.25□□□□□ -0.93
CHMP4C-201ENST00000297265 REG3AQ06141 175 aa9.25□□□□□ -0.93
CHMP4C-201ENST00000297265 SS18Q15532 418 aa9.25□□□□□ -0.93
CHMP4C-201ENST00000297265 C11orf45Q8TAV5 145 aa9.25□□□□□ -0.93
CHMP4C-201ENST00000297265 NPC2P61916 151 aa9.25□□□□□ -0.93
CHMP4C-201ENST00000297265 PRO1854Q9UHT4 67 aa9.25□□□□□ -0.93
CHMP4C-201ENST00000297265 A0A0B4J2C4 111 aa9.24□□□□□ -0.93
CHMP4C-201ENST00000297265 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
CHMP4C-201ENST00000297265 GTF2H5Q6ZYL4 71 aa9.24□□□□□ -0.93
CHMP4C-201ENST00000297265 PRR34Q9NV39 138 aa9.24□□□□□ -0.93
CHMP4C-201ENST00000297265 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
CHMP4C-201ENST00000297265 IGHV3-33P01772 117 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 HERV-K104P63124 156 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 SPATA25Q9BR10 227 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 IFITM1P13164 125 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 DEFB121Q5J5C9 76 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 CD164L2Q6UWJ8 174 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 LINC01561Q8N1V8 128 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 MRAPQ8TCY5 172 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
CHMP4C-201ENST00000297265 DEFB131BA0A096LNP1 70 aa9.22□□□□□ -0.93
CHMP4C-201ENST00000297265 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
CHMP4C-201ENST00000297265 ESRGQ1W209 222 aa9.22□□□□□ -0.93
CHMP4C-201ENST00000297265 ENHOQ6UWT2 76 aa9.22□□□□□ -0.93
CHMP4C-201ENST00000297265 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.93
CHMP4C-201ENST00000297265 WFDC10BQ8IUB3 73 aa9.21□□□□□ -0.93
CHMP4C-201ENST00000297265 FOXI1Q12951 378 aa9.21□□□□□ -0.94
CHMP4C-201ENST00000297265 KIAA0087Q14695 138 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms